SNP Links for Nucleotide (Select 301500676) - SNP

Links from Nucleotide

Items: 1 to 20 of 1000

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Select item 14909613571.

rs1490961357 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:36192545 (GRCh38)
22:36588591 (GRCh37)
Canonical SPDI:: NC_000022.11:36192544:T:C
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.36192545T>C, NC_000022.10:g.36588591T>C, NG_023437.1:g.17289A>G

Select item 14907778352.

rs1490777835 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 22:36208502 (GRCh38)
22:36604548 (GRCh37)
Canonical SPDI:: NC_000022.11:36208501:G:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000155/41 (TOPMED)
T=0.000178/25 (GnomAD)
HGVS:: NC_000022.11:g.36208502G>T, NC_000022.10:g.36604548G>T, NG_023437.1:g.1332C>A

Select item 14906600553.

rs1490660055 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 22:36206983 (GRCh38)
22:36603029 (GRCh37)
Canonical SPDI:: NC_000022.11:36206982:A:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.36206983A>T, NC_000022.10:g.36603029A>T, NG_023437.1:g.2851T>A

Select item 14905650704.

rs1490565070 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 22:36193640 (GRCh38)
22:36589686 (GRCh37)
Canonical SPDI:: NC_000022.11:36193639:AA:A
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.36193641del, NC_000022.10:g.36589687del, NG_023437.1:g.16194del

Select item 14905271355.

rs1490527135 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:36206002 (GRCh38)
22:36602048 (GRCh37)
Canonical SPDI:: NC_000022.11:36206001:G:A
Gene:: APOL4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000106/2 (TOMMO)
HGVS:: NC_000022.11:g.36206002G>A, NC_000022.10:g.36602048G>A, NG_023437.1:g.3832C>T

Select item 14904665326.

rs1490466532 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 22:36201144 (GRCh38)
22:36597190 (GRCh37)
Canonical SPDI:: NC_000022.11:36201143:C:
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.36201144del, NC_000022.10:g.36597190del, NG_023437.1:g.8690del

Select item 14903560957.

rs1490356095 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 22:36206682 (GRCh38)
22:36602728 (GRCh37)
Canonical SPDI:: NC_000022.11:36206679:CTCT:CT
Gene:: APOL4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTCT=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.36206680CT[1], NC_000022.10:g.36602726CT[1], NG_023437.1:g.3151AG[1]

Select item 14903140218.

rs1490314021 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 22:36195848 (GRCh38)
22:36591894 (GRCh37)
Canonical SPDI:: NC_000022.11:36195847:T:G
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.36195848T>G, NC_000022.10:g.36591894T>G, NG_023437.1:g.13986A>C

Select item 14900704759.

rs1490070475 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 22:36197635 (GRCh38)
22:36593681 (GRCh37)
Canonical SPDI:: NC_000022.11:36197634:C:T
Gene:: APOL4 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000021/3 (GnomAD_exomes)
HGVS:: NC_000022.11:g.36197635C>T, NC_000022.10:g.36593681C>T, NG_023437.1:g.12199G>A, NM_145661.2:c.*8G>A, NM_145661.1:c.*8G>A

Select item 148997491310.

rs1489974913 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:36201463 (GRCh38)
22:36597509 (GRCh37)
Canonical SPDI:: NC_000022.11:36201462:G:A
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000022.11:g.36201463G>A, NC_000022.10:g.36597509G>A, NG_023437.1:g.8371C>T

Select item 148995716111.

rs1489957161 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:36188386 (GRCh38)
22:36584434 (GRCh37)
Canonical SPDI:: NC_000022.11:36188385:A:G
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000022.11:g.36188386A>G, NC_000022.10:g.36584434A>G, NG_023437.1:g.21448T>C

Select item 148974073112.

rs1489740731 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 22:36203270 (GRCh38)
22:36599316 (GRCh37)
Canonical SPDI:: NC_000022.11:36203269:G:A,NC_000022.11:36203269:G:T
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.36203270G>A, NC_000022.11:g.36203270G>T, NC_000022.10:g.36599316G>A, NC_000022.10:g.36599316G>T, NG_023437.1:g.6564C>T, NG_023437.1:g.6564C>A

Select item 148944703313.

rs1489447033 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 22:36196343 (GRCh38)
22:36592389 (GRCh37)
Canonical SPDI:: NC_000022.11:36196342:AT:
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000022.11:g.36196343_36196344del, NC_000022.10:g.36592389_36592390del, NG_023437.1:g.13490_13491del

Select item 148942885214.

rs1489428852 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:36193750 (GRCh38)
22:36589796 (GRCh37)
Canonical SPDI:: NC_000022.11:36193749:A:G
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000022.11:g.36193750A>G, NC_000022.10:g.36589796A>G, NG_023437.1:g.16084T>C

Select item 148916012215.

rs1489160122 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:36206421 (GRCh38)
22:36602467 (GRCh37)
Canonical SPDI:: NC_000022.11:36206420:T:C
Gene:: APOL4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000034/9 (TOPMED)
HGVS:: NC_000022.11:g.36206421T>C, NC_000022.10:g.36602467T>C, NG_023437.1:g.3413A>G

Select item 148895928716.

rs1488959287 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 22:36208832 (GRCh38)
22:36604878 (GRCh37)
Canonical SPDI:: NC_000022.11:36208831:T:A,NC_000022.11:36208831:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000022.11:g.36208832T>A, NC_000022.11:g.36208832T>C, NC_000022.10:g.36604878T>A, NC_000022.10:g.36604878T>C, NG_023437.1:g.1002A>T, NG_023437.1:g.1002A>G

Select item 148866209417.

rs1488662094 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 22:36200236 (GRCh38)
22:36596282 (GRCh37)
Canonical SPDI:: NC_000022.11:36200235:G:A
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000022.11:g.36200236G>A, NC_000022.10:g.36596282G>A, NG_023437.1:g.9598C>T

Select item 148860859118.

rs1488608591 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 22:36201657 (GRCh38)
22:36597703 (GRCh37)
Canonical SPDI:: NC_000022.11:36201656:A:G
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
HGVS:: NC_000022.11:g.36201657A>G, NC_000022.10:g.36597703A>G, NG_023437.1:g.8177T>C

Select item 148816144419.

rs1488161444 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 22:36187290 (GRCh38)
22:36583338 (GRCh37)
Canonical SPDI:: NC_000022.11:36187289:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00001/1 (GnomAD)
HGVS:: NC_000022.11:g.36187290T>C, NC_000022.10:g.36583338T>C, NG_023437.1:g.22544A>G

Select item 148815333820.

rs1488153338 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 22:36197899 (GRCh38)
22:36593945 (GRCh37)
Canonical SPDI:: NC_000022.11:36197898:A:T
Gene:: APOL4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000022.11:g.36197899A>T, NC_000022.10:g.36593945A>T, NG_023437.1:g.11935T>A

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