SNP Links for Nucleotide (Select 262206191) - SNP

Select item 14642592161.

rs1464259216 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:166154795 (GRCh38)
1:166124032 (GRCh37)
Canonical SPDI:: NC_000001.11:166154794:T:C
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000018/3 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166154795T>C, NC_000001.10:g.166124032T>C, NR_030626.1:n.4A>G

Select item 14385350412.

rs1438535041 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:166154769 (GRCh38)
1:166124006 (GRCh37)
Canonical SPDI:: NC_000001.11:166154768:G:A
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166154769G>A, NC_000001.10:g.166124006G>A, NR_030626.1:n.30C>T

Select item 13531228103.

rs1353122810 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:166154756 (GRCh38)
1:166123993 (GRCh37)
Canonical SPDI:: NC_000001.11:166154755:C:A
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166154756C>A, NC_000001.10:g.166123993C>A, NR_030626.1:n.43G>T

Select item 13070597754.

rs1307059775 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:166154745 (GRCh38)
1:166123982 (GRCh37)
Canonical SPDI:: NC_000001.11:166154744:A:C
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166154745A>C, NC_000001.10:g.166123982A>C, NR_030626.1:n.54T>G

Select item 11990388995.

rs1199038899 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166154758 (GRCh38)
1:166123995 (GRCh37)
Canonical SPDI:: NC_000001.11:166154757:C:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
HGVS:: NC_000001.11:g.166154758C>T, NC_000001.10:g.166123995C>T, NR_030626.1:n.41G>A

Select item 9561766216.

rs956176621 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:166154767 (GRCh38)
1:166124004 (GRCh37)
Canonical SPDI:: NC_000001.11:166154766:G:A,NC_000001.11:166154766:G:C
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000034/9 (TOPMED)
HGVS:: NC_000001.11:g.166154767G>A, NC_000001.11:g.166154767G>C, NC_000001.10:g.166124004G>A, NC_000001.10:g.166124004G>C, NR_030626.1:n.32C>T, NR_030626.1:n.32C>G

Select item 9273829517.

rs927382951 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:166154798 (GRCh38)
1:166124035 (GRCh37)
Canonical SPDI:: NC_000001.11:166154797:T:C
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.166154798T>C, NC_000001.10:g.166124035T>C, NR_030626.1:n.1A>G

Select item 7792917258.

rs779291725 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:166154759 (GRCh38)
1:166123996 (GRCh37)
Canonical SPDI:: NC_000001.11:166154758:A:G
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/4 (GnomAD_exomes)
G=0.000034/9 (TOPMED)
G=0.000037/2 (ExAC)
G=0.000043/6 (GnomAD)
HGVS:: NC_000001.11:g.166154759A>G, NC_000001.10:g.166123996A>G, NR_030626.1:n.40T>C

Select item 7754679089.

rs775467908 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:166154763 (GRCh38)
1:166124000 (GRCh37)
Canonical SPDI:: NC_000001.11:166154762:A:G,NC_000001.11:166154762:A:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000056/2 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000024/5 (GnomAD_exomes)
G=0.00004/2 (ExAC)
HGVS:: NC_000001.11:g.166154763A>G, NC_000001.11:g.166154763A>T, NC_000001.10:g.166124000A>G, NC_000001.10:g.166124000A>T, NR_030626.1:n.36T>C, NR_030626.1:n.36T>A

Select item 76842885510.

rs768428855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166154790 (GRCh38)
1:166124027 (GRCh37)
Canonical SPDI:: NC_000001.11:166154789:C:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0./0 (ExAC)
T=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.166154790C>T, NC_000001.10:g.166124027C>T, NR_030626.1:n.9G>A

Select item 75748602511.

rs757486025 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 1:166154753 (GRCh38)
1:166123990 (GRCh37)
Canonical SPDI:: NC_000001.11:166154752:A:G,NC_000001.11:166154752:A:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000005/1 (GnomAD_exomes)
T=0.000017/1 (ExAC)
HGVS:: NC_000001.11:g.166154753A>G, NC_000001.11:g.166154753A>T, NC_000001.10:g.166123990A>G, NC_000001.10:g.166123990A>T, NR_030626.1:n.46T>C, NR_030626.1:n.46T>A

Select item 74951556412.

rs749515564 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:166154747 (GRCh38)
1:166123984 (GRCh37)
Canonical SPDI:: NC_000001.11:166154746:T:C
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.000016/1 (ExAC)
HGVS:: NC_000001.11:g.166154747T>C, NC_000001.10:g.166123984T>C, NR_030626.1:n.52A>G

Select item 74892103813.

rs748921038 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:166154748 (GRCh38)
1:166123985 (GRCh37)
Canonical SPDI:: NC_000001.11:166154747:G:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (ALSPAC)
T=0./0 (GnomAD)
T=0.000004/1 (GnomAD_exomes)
T=0.00027/1 (TWINSUK)
HGVS:: NC_000001.11:g.166154748G>T, NC_000001.10:g.166123985G>T, NR_030626.1:n.51C>A

Select item 74697099914.

rs746970999 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:166154778 (GRCh38)
1:166124015 (GRCh37)
Canonical SPDI:: NC_000001.11:166154777:C:T
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.000005/1 (GnomAD_exomes)
T=0.000026/1 (ExAC)
HGVS:: NC_000001.11:g.166154778C>T, NC_000001.10:g.166124015C>T, NR_030626.1:n.21G>A

Select item 74591131915.

rs745911319 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:166154760 (GRCh38)
1:166123997 (GRCh37)
Canonical SPDI:: NC_000001.11:166154759:T:C,NC_000001.11:166154759:T:G
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
C=0.001667/1 (NorthernSweden)
HGVS:: NC_000001.11:g.166154760T>C, NC_000001.11:g.166154760T>G, NC_000001.10:g.166123997T>C, NC_000001.10:g.166123997T>G, NR_030626.1:n.39A>G, NR_030626.1:n.39A>C

Select item 37375447816.

rs373754478 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 1:166154749 (GRCh38)
1:166123986 (GRCh37)
Canonical SPDI:: NC_000001.11:166154748:A:
Gene:: FAM78B (Varview), MIR921 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000023/1 (ALFA)
-=0.000157/22 (GnomAD)
-=0.000227/60 (TOPMED)
-=0.00046/103 (GnomAD_exomes)
-=0.00046/8 (TOMMO)
-=0.000651/41 (ExAC)
-=0.000937/5 (1000Genomes)
HGVS:: NC_000001.11:g.166154749del, NC_000001.10:g.166123986del, NR_030626.1:n.50del

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Links from Nucleotide

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