SNP Links for Nucleotide (Select 256017228) - SNP

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Links from Nucleotide

Items: 1 to 20 of 180

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Select item 14906696451.

rs1490669645 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:80178125 (GRCh38)
18:77936008 (GRCh37)
Canonical SPDI:: NC_000018.10:80178124:G:A
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80178125G>A, NC_000018.9:g.77936008G>A, NR_028340.1:n.427G>A, NM_001145733.1:c.192G>A

Select item 14868522412.

rs1486852241 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 18:80148019 (GRCh38)
18:77905903 (GRCh37)
Canonical SPDI:: NC_000018.10:80148019:AAA:AAAA
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.80148022dup, NC_000018.9:g.77905905dup, NR_028339.1:n.99dup, NM_001145731.1:c.-137dup, NM_001145732.1:c.-137dup, NR_028340.1:n.99dup, NM_001145733.1:c.-137dup

Select item 14842431083.

rs1484243108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 18:80178366 (GRCh38)
18:77936249 (GRCh37)
Canonical SPDI:: NC_000018.10:80178365:C:T
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000018.10:g.80178366C>T, NC_000018.9:g.77936249C>T, NR_028340.1:n.668C>T, NM_001145733.1:c.*238C>T

Select item 14812392274.

rs1481239227 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 18:80178217 (GRCh38)
18:77936100 (GRCh37)
Canonical SPDI:: NC_000018.10:80178216:A:C
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80178217A>C, NC_000018.9:g.77936100A>C, NR_028340.1:n.519A>C, NM_001145733.1:c.*89A>C

Select item 14809558245.

rs1480955824 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:80178364 (GRCh38)
18:77936247 (GRCh37)
Canonical SPDI:: NC_000018.10:80178363:A:G
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000026/7 (TOPMED)
G=0.000057/8 (GnomAD)
HGVS:: NC_000018.10:g.80178364A>G, NC_000018.9:g.77936247A>G, NR_028340.1:n.666A>G, NM_001145733.1:c.*236A>G

Select item 14783357296.

rs1478335729 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 18:80148124 (GRCh38)
18:77906007 (GRCh37)
Canonical SPDI:: NC_000018.10:80148123:C:T
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.00011/2 (GnomAD_exomes)
HGVS:: NC_000018.10:g.80148124C>T, NC_000018.9:g.77906007C>T, NR_028339.1:n.201C>T, NM_001145731.1:c.-35C>T, NM_001145732.1:c.-35C>T, NR_028340.1:n.201C>T, NM_001145733.1:c.-35C>T

Select item 14782891417.

rs1478289141 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 18:80147934 (GRCh38)
18:77905817 (GRCh37)
Canonical SPDI:: NC_000018.10:80147933:C:T
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.00046/8 (TOMMO)
HGVS:: NC_000018.10:g.80147934C>T, NC_000018.9:g.77905817C>T, NR_028339.1:n.11C>T, NM_001145731.1:c.-225C>T, NM_001145732.1:c.-225C>T, NR_028340.1:n.11C>T, NM_001145733.1:c.-225C>T

Select item 14774336738.

rs1477433673 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 18:80175918 (GRCh38)
18:77933801 (GRCh37)
Canonical SPDI:: NC_000018.10:80175917:G:C
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.80175918G>C, NC_000018.9:g.77933801G>C, NR_028340.1:n.370G>C, NM_001145733.1:c.135G>C

Select item 14706650559.

rs1470665055 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:80178333 (GRCh38)
18:77936216 (GRCh37)
Canonical SPDI:: NC_000018.10:80178332:G:A
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80178333G>A, NC_000018.9:g.77936216G>A, NR_028340.1:n.635G>A, NM_001145733.1:c.*205G>A

Select item 147047464910.

rs1470474649 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 18:80147930 (GRCh38)
18:77905813 (GRCh37)
Canonical SPDI:: NC_000018.10:80147929:A:C
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80147930A>C, NC_000018.9:g.77905813A>C, NR_028339.1:n.7A>C, NM_001145731.1:c.-229A>C, NM_001145732.1:c.-229A>C, NR_028340.1:n.7A>C, NM_001145733.1:c.-229A>C

Select item 146396329411.

rs1463963294 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:80178353 (GRCh38)
18:77936236 (GRCh37)
Canonical SPDI:: NC_000018.10:80178352:G:A
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.80178353G>A, NC_000018.9:g.77936236G>A, NR_028340.1:n.655G>A, NM_001145733.1:c.*225G>A

Select item 145991302712.

rs1459913027 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:80148155 (GRCh38)
18:77906038 (GRCh37)
Canonical SPDI:: NC_000018.10:80148154:A:G
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000018.10:g.80148155A>G, NC_000018.9:g.77906038A>G, NR_028339.1:n.232A>G, NM_001145731.1:c.-4A>G, NM_001145732.1:c.-4A>G, NR_028340.1:n.232A>G, NM_001145733.1:c.-4A>G

Select item 145928515513.

rs1459285155 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:80148138 (GRCh38)
18:77906021 (GRCh37)
Canonical SPDI:: NC_000018.10:80148137:G:A
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80148138G>A, NC_000018.9:g.77906021G>A, NR_028339.1:n.215G>A, NM_001145731.1:c.-21G>A, NM_001145732.1:c.-21G>A, NR_028340.1:n.215G>A, NM_001145733.1:c.-21G>A

Select item 145867237214.

rs1458672372 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 18:80148135 (GRCh38)
18:77906018 (GRCh37)
Canonical SPDI:: NC_000018.10:80148134:C:T
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.80148135C>T, NC_000018.9:g.77906018C>T, NR_028339.1:n.212C>T, NM_001145731.1:c.-24C>T, NM_001145732.1:c.-24C>T, NR_028340.1:n.212C>T, NM_001145733.1:c.-24C>T

Select item 145596527215.

rs1455965272 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 18:80178404 (GRCh38)
18:77936287 (GRCh37)
Canonical SPDI:: NC_000018.10:80178403:C:A
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80178404C>A, NC_000018.9:g.77936287C>A, NR_028340.1:n.706C>A

Select item 145075080216.

rs1450750802 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 18:80148079 (GRCh38)
18:77905962 (GRCh37)
Canonical SPDI:: NC_000018.10:80148078:G:T
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000018.10:g.80148079G>T, NC_000018.9:g.77905962G>T, NR_028339.1:n.156G>T, NM_001145731.1:c.-80G>T, NM_001145732.1:c.-80G>T, NR_028340.1:n.156G>T, NM_001145733.1:c.-80G>T

Select item 144149895717.

rs1441498957 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 18:80148212 (GRCh38)
18:77906095 (GRCh37)
Canonical SPDI:: NC_000018.10:80148211:T:A
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.80148212T>A, NC_000018.9:g.77906095T>A, NR_028339.1:n.289T>A, NM_001145731.1:c.54T>A, NM_001145732.1:c.54T>A, NR_028340.1:n.289T>A, NM_001145733.1:c.54T>A

Select item 143299687518.

rs1432996875 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:80178344 (GRCh38)
18:77936227 (GRCh37)
Canonical SPDI:: NC_000018.10:80178343:G:A
Gene:: PARD6G (Varview), PARD6G-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
A=0.002831/47 (TOMMO)
HGVS:: NC_000018.10:g.80178344G>A, NC_000018.9:g.77936227G>A, NR_028340.1:n.646G>A, NM_001145733.1:c.*216G>A

Select item 142914590219.

rs1429145902 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:80147991 (GRCh38)
18:77905874 (GRCh37)
Canonical SPDI:: NC_000018.10:80147990:T:C
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0./0 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000018.10:g.80147991T>C, NC_000018.9:g.77905874T>C, NR_028339.1:n.68T>C, NM_001145731.1:c.-168T>C, NM_001145732.1:c.-168T>C, NR_028340.1:n.68T>C, NM_001145733.1:c.-168T>C

Select item 142886654320.

rs1428866543 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 18:80147928 (GRCh38)
18:77905811 (GRCh37)
Canonical SPDI:: NC_000018.10:80147927:C:G
Gene:: PARD6G-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.80147928C>G, NC_000018.9:g.77905811C>G, NR_028339.1:n.5C>G, NM_001145731.1:c.-231C>G, NM_001145732.1:c.-231C>G, NR_028340.1:n.5C>G, NM_001145733.1:c.-231C>G

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