SNP Links for Nucleotide (Select 255683421) - SNP

Links from Nucleotide

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Select item 14902730671.

rs1490273067 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:90348825 (GRCh38)
15:90892057 (GRCh37)
Canonical SPDI:: NC_000015.10:90348824:C:G
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.90348825C>G, NC_000015.9:g.90892057C>G, NR_028287.1:n.623G>C, NM_032568.1:c.*19G>C

Select item 14874977942.

rs1487497794 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:90349198 (GRCh38)
15:90892430 (GRCh37)
Canonical SPDI:: NC_000015.10:90349197:G:A
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.90349198G>A, NC_000015.9:g.90892430G>A, NR_028287.1:n.250C>T, NM_032568.1:c.-1C>T

Select item 14870358553.

rs1487035855 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:90349393 (GRCh38)
15:90892625 (GRCh37)
Canonical SPDI:: NC_000015.10:90349392:C:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.90349393C>T, NC_000015.9:g.90892625C>T, NR_028287.1:n.55G>A, NM_032568.1:c.-196G>A

Select item 14860266224.

rs1486026622 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:90348572 (GRCh38)
15:90891804 (GRCh37)
Canonical SPDI:: NC_000015.10:90348571:G:A
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.90348572G>A, NC_000015.9:g.90891804G>A, NR_028287.1:n.876C>T, NM_032568.1:c.*272C>T

Select item 14860251875.

rs1486025187 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:90348657 (GRCh38)
15:90891889 (GRCh37)
Canonical SPDI:: NC_000015.10:90348656:G:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.90348657G>T, NC_000015.9:g.90891889G>T, NR_028287.1:n.791C>A, NM_032568.1:c.*187C>A

Select item 14853387656.

rs1485338765 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:90348344 (GRCh38)
15:90891576 (GRCh37)
Canonical SPDI:: NC_000015.10:90348343:C:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000015.10:g.90348344C>T, NC_000015.9:g.90891576C>T, NR_028287.1:n.1104G>A, NM_032568.1:c.*500G>A

Select item 14827544427.

rs1482754442 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:90349309 (GRCh38)
15:90892541 (GRCh37)
Canonical SPDI:: NC_000015.10:90349308:T:C
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000036/5 (GnomAD)
C=0.000053/14 (TOPMED)
HGVS:: NC_000015.10:g.90349309T>C, NC_000015.9:g.90892541T>C, NR_028287.1:n.139A>G, NM_032568.1:c.-112A>G

Select item 14820278078.

rs1482027807 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGGGCA [Show Flanks]
Chromosome:: 15:90349040 (GRCh38)
15:90892273 (GRCh37)
Canonical SPDI:: NC_000015.10:90349040:AGGGCA:AGGGCAAGGGCA
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AGGGCAAGGGCA=0./0 (ALFA)
AGGGCA=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.90349041_90349046dup, NC_000015.9:g.90892273_90892278dup, NR_028287.1:n.402_407dup, NM_032568.1:c.152_157dup

Select item 14793371229.

rs1479337122 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:90348913 (GRCh38)
15:90892145 (GRCh37)
Canonical SPDI:: NC_000015.10:90348912:A:C
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.90348913A>C, NC_000015.9:g.90892145A>C, NR_028287.1:n.535T>G, NM_032568.1:c.285T>G

Select item 147890451510.

rs1478904515 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 15:90347728 (GRCh38)
15:90890960 (GRCh37)
Canonical SPDI:: NC_000015.10:90347727:A:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.90347728A>T, NC_000015.9:g.90890960A>T, NR_028287.1:n.1720T>A, NM_032568.1:c.*1116T>A

Select item 147563788311.

rs1475637883 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 15:90348363 (GRCh38)
15:90891595 (GRCh37)
Canonical SPDI:: NC_000015.10:90348362:A:C,NC_000015.10:90348362:A:G
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.90348363A>C, NC_000015.10:g.90348363A>G, NC_000015.9:g.90891595A>C, NC_000015.9:g.90891595A>G, NR_028287.1:n.1085T>G, NR_028287.1:n.1085T>C, NM_032568.1:c.*481T>G, NM_032568.1:c.*481T>C

Select item 147563540812.

rs1475635408 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:90348689 (GRCh38)
15:90891921 (GRCh37)
Canonical SPDI:: NC_000015.10:90348688:A:G
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.90348689A>G, NC_000015.9:g.90891921A>G, NR_028287.1:n.759T>C, NM_032568.1:c.*155T>C

Select item 147399946213.

rs1473999462 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:90349430 (GRCh38)
15:90892662 (GRCh37)
Canonical SPDI:: NC_000015.10:90349429:G:A
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00003/8 (TOPMED)
A=0.000043/6 (GnomAD)
HGVS:: NC_000015.10:g.90349430G>A, NC_000015.9:g.90892662G>A, NR_028287.1:n.18C>T, NM_032568.1:c.-233C>T

Select item 146962955714.

rs1469629557 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:90347760 (GRCh38)
15:90890992 (GRCh37)
Canonical SPDI:: NC_000015.10:90347759:T:C
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.90347760T>C, NC_000015.9:g.90890992T>C, NR_028287.1:n.1688A>G, NM_032568.1:c.*1084A>G

Select item 146899224715.

rs1468992247 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:90348328 (GRCh38)
15:90891560 (GRCh37)
Canonical SPDI:: NC_000015.10:90348327:G:A,NC_000015.10:90348327:G:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.90348328G>A, NC_000015.10:g.90348328G>T, NC_000015.9:g.90891560G>A, NC_000015.9:g.90891560G>T, NR_028287.1:n.1120C>T, NR_028287.1:n.1120C>A, NM_032568.1:c.*516C>T, NM_032568.1:c.*516C>A

Select item 146879824616.

rs1468798246 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:90349143 (GRCh38)
15:90892375 (GRCh37)
Canonical SPDI:: NC_000015.10:90349142:C:A,NC_000015.10:90349142:C:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.90349143C>A, NC_000015.10:g.90349143C>T, NC_000015.9:g.90892375C>A, NC_000015.9:g.90892375C>T, NR_028287.1:n.305G>T, NR_028287.1:n.305G>A, NM_032568.1:c.55G>T, NM_032568.1:c.55G>A

Select item 146825122717.

rs1468251227 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:90349074 (GRCh38)
15:90892306 (GRCh37)
Canonical SPDI:: NC_000015.10:90349073:G:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.90349074G>T, NC_000015.9:g.90892306G>T, NR_028287.1:n.374C>A, NM_032568.1:c.124C>A

Select item 146596150518.

rs1465961505 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:90347865 (GRCh38)
15:90891097 (GRCh37)
Canonical SPDI:: NC_000015.10:90347864:G:A
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.90347865G>A, NC_000015.9:g.90891097G>A, NR_028287.1:n.1583C>T, NM_032568.1:c.*979C>T

Select item 146389969019.

rs1463899690 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:90348761 (GRCh38)
15:90891993 (GRCh37)
Canonical SPDI:: NC_000015.10:90348760:C:A,NC_000015.10:90348760:C:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000015.10:g.90348761C>A, NC_000015.10:g.90348761C>T, NC_000015.9:g.90891993C>A, NC_000015.9:g.90891993C>T, NR_028287.1:n.687G>T, NR_028287.1:n.687G>A, NM_032568.1:c.*83G>T, NM_032568.1:c.*83G>A

Select item 146217978120.

rs1462179781 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATCTTCTTAATCATAACCACCCT>- [Show Flanks]
Chromosome:: 15:90348174 (GRCh38)
15:90891406 (GRCh37)
Canonical SPDI:: NC_000015.10:90348172:TATCTTCTTAATCATAACCACCCT:T
Gene:: GABARAPL3 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: -=0.005466/766 (GnomAD)
-=0.005778/37 (1000Genomes)
HGVS:: NC_000015.10:g.90348174_90348196del, NC_000015.9:g.90891406_90891428del, NR_028287.1:n.1253_1275del, NM_032568.1:c.*649_*671del

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