SNP Links for Nucleotide (Select 222831572) - SNP

Links from Nucleotide

Items: 1 to 20 of 909

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Select item 14895619041.

rs1489561904 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:91853755 (GRCh38)
15:92396985 (GRCh37)
Canonical SPDI:: NC_000015.10:91853754:C:G
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000022/3 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000015.10:g.91853755C>G, NC_000015.9:g.92396985C>G, NM_013272.4:c.-154C>G, NM_013272.3:c.-154C>G, XR_931796.3:n.48C>G, XM_005254889.2:c.-154C>G, NM_001145044.1:c.-154C>G

Select item 14885153882.

rs1488515388 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:92128377 (GRCh38)
15:92671607 (GRCh37)
Canonical SPDI:: NC_000015.10:92128376:C:A,NC_000015.10:92128376:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000015.10:g.92128377C>A, NC_000015.10:g.92128377C>T, NC_000015.9:g.92671607C>A, NC_000015.9:g.92671607C>T, NM_013272.4:c.1400C>A, NM_013272.4:c.1400C>T, NM_013272.3:c.1400C>A, NM_013272.3:c.1400C>T, XM_011521456.3:c.1226C>A, XM_011521456.3:c.1226C>T, XM_011521456.2:c.1226C>A, XM_011521456.2:c.1226C>T, XM_011521456.1:c.1226C>A, XM_011521456.1:c.1226C>T, XR_931796.3:n.1601C>A, XR_931796.3:n.1601C>T, XR_931796.2:n.1490C>A, XR_931796.2:n.1490C>T, XR_931796.1:n.1490C>A, XR_931796.1:n.1490C>T, XM_005254889.2:c.1400C>A, XM_005254889.2:c.1400C>T, XM_005254889.1:c.1400C>A, XM_005254889.1:c.1400C>T, NR_135775.2:n.1327C>A, NR_135775.2:n.1327C>T, NR_135775.1:n.1331C>A, NR_135775.1:n.1331C>T, NM_001145044.1:c.1400C>A, NM_001145044.1:c.1400C>T, NP_037404.2:p.Pro467His, NP_037404.2:p.Pro467Leu, XP_011519758.1:p.Pro409His, XP_011519758.1:p.Pro409Leu, XP_005254946.1:p.Pro467His, XP_005254946.1:p.Pro467Leu, NP_001138516.1:p.Pro467His, NP_001138516.1:p.Pro467Leu

Select item 14871349683.

rs1487134968 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:91853914 (GRCh38)
15:92397144 (GRCh37)
Canonical SPDI:: NC_000015.10:91853913:G:A
Gene:: SLCO3A1 (Varview)
Functional Consequence:: upstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,synonymous_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00006/1 (TOMMO)
HGVS:: NC_000015.10:g.91853914G>A, NC_000015.9:g.92397144G>A, NM_013272.4:c.6G>A, NM_013272.3:c.6G>A, XR_931796.3:n.207G>A, XR_931796.2:n.96G>A, XR_931796.1:n.96G>A, XM_005254889.2:c.6G>A, XM_005254889.1:c.6G>A, NM_001145044.1:c.6G>A

Select item 14848851484.

rs1484885148 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:92104435 (GRCh38)
15:92647665 (GRCh37)
Canonical SPDI:: NC_000015.10:92104434:A:G
Gene:: SLCO3A1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92104435A>G, NC_000015.9:g.92647665A>G, NM_013272.4:c.902A>G, NM_013272.3:c.902A>G, XM_011521456.3:c.728A>G, XM_011521456.2:c.728A>G, XM_011521456.1:c.728A>G, XR_931796.3:n.1103A>G, XR_931796.2:n.992A>G, XR_931796.1:n.992A>G, XM_005254889.2:c.902A>G, XM_005254889.1:c.902A>G, NR_135775.2:n.829A>G, NR_135775.1:n.833A>G, NM_001145044.1:c.902A>G, NP_037404.2:p.Gln301Arg, XP_011519758.1:p.Gln243Arg, XP_005254946.1:p.Gln301Arg, NP_001138516.1:p.Gln301Arg

Select item 14847405035.

rs1484740503 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:91916305 (GRCh38)
15:92459535 (GRCh37)
Canonical SPDI:: NC_000015.10:91916304:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by cluster
HGVS:: NC_000015.10:g.91916305C>T, NC_000015.9:g.92459535C>T, NM_013272.4:c.493C>T, NM_013272.3:c.493C>T, XM_011521456.3:c.319C>T, XM_011521456.2:c.319C>T, XM_011521456.1:c.319C>T, XR_931796.3:n.694C>T, XR_931796.2:n.583C>T, XR_931796.1:n.583C>T, XM_005254889.2:c.493C>T, XM_005254889.1:c.493C>T, NR_135775.2:n.420C>T, NR_135775.1:n.424C>T, NM_001145044.1:c.493C>T, NP_037404.2:p.Leu165Phe, XP_011519758.1:p.Leu107Phe, XP_005254946.1:p.Leu165Phe, NP_001138516.1:p.Leu165Phe

Select item 14844602946.

rs1484460294 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:92171957 (GRCh38)
15:92715187 (GRCh37)
Canonical SPDI:: NC_000015.10:92171956:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.92171957C>T, NC_000015.9:g.92715187C>T, NM_001145044.1:c.*95C>T

Select item 14831802767.

rs1483180276 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:91853834 (GRCh38)
15:92397064 (GRCh37)
Canonical SPDI:: NC_000015.10:91853833:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (GnomAD)
HGVS:: NC_000015.10:g.91853834C>T, NC_000015.9:g.92397064C>T, NM_013272.4:c.-75C>T, NM_013272.3:c.-75C>T, XR_931796.3:n.127C>T, XR_931796.2:n.16C>T, XR_931796.1:n.16C>T, XM_005254889.2:c.-75C>T, XM_005254889.1:c.-75C>T, NM_001145044.1:c.-75C>T

Select item 14821468188.

rs1482146818 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92171972 (GRCh38)
15:92715202 (GRCh37)
Canonical SPDI:: NC_000015.10:92171971:G:A
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.92171972G>A, NC_000015.9:g.92715202G>A, NM_001145044.1:c.*110G>A

Select item 14813684269.

rs1481368426 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:92171946 (GRCh38)
15:92715176 (GRCh37)
Canonical SPDI:: NC_000015.10:92171945:C:A,NC_000015.10:92171945:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92171946C>A, NC_000015.10:g.92171946C>T, NC_000015.9:g.92715176C>A, NC_000015.9:g.92715176C>T, NM_001145044.1:c.*84C>A, NM_001145044.1:c.*84C>T

Select item 148129220410.

rs1481292204 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:91853905 (GRCh38)
15:92397135 (GRCh37)
Canonical SPDI:: NC_000015.10:91853904:A:G
Gene:: SLCO3A1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00008/1 (ALFA)
G=0.01587/43 (KOREAN)
A=0.5/1 (SGDP_PRJ)
A=0.5/1 (Siberian)
HGVS:: NC_000015.10:g.91853905A>G, NC_000015.9:g.92397135A>G, NM_013272.4:c.-4A>G, NM_013272.3:c.-4A>G, XR_931796.3:n.198A>G, XR_931796.2:n.87A>G, XR_931796.1:n.87A>G, XM_005254889.2:c.-4A>G, XM_005254889.1:c.-4A>G, NM_001145044.1:c.-4A>G

Select item 147942149111.

rs1479421491 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 15:92171874 (GRCh38)
15:92715104 (GRCh37)
Canonical SPDI:: NC_000015.10:92171873:T:G
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.92171874T>G, NC_000015.9:g.92715104T>G, NM_001145044.1:c.*12T>G

Select item 147871094112.

rs1478710941 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:92126128 (GRCh38)
15:92669358 (GRCh37)
Canonical SPDI:: NC_000015.10:92126127:C:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.92126128C>T, NC_000015.9:g.92669358C>T, NM_013272.4:c.1242C>T, NM_013272.3:c.1242C>T, XM_011521456.3:c.1068C>T, XM_011521456.2:c.1068C>T, XM_011521456.1:c.1068C>T, XR_931796.3:n.1443C>T, XR_931796.2:n.1332C>T, XR_931796.1:n.1332C>T, XM_005254889.2:c.1242C>T, XM_005254889.1:c.1242C>T, NR_135775.2:n.1169C>T, NR_135775.1:n.1173C>T, NM_001145044.1:c.1242C>T

Select item 147801620913.

rs1478016209 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 15:91853742 (GRCh38)
15:92396972 (GRCh37)
Canonical SPDI:: NC_000015.10:91853741:G:C,NC_000015.10:91853741:G:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.91853742G>C, NC_000015.10:g.91853742G>T, NC_000015.9:g.92396972G>C, NC_000015.9:g.92396972G>T, NM_013272.4:c.-167G>C, NM_013272.4:c.-167G>T, NM_013272.3:c.-167G>C, NM_013272.3:c.-167G>T, XR_931796.3:n.35G>C, XR_931796.3:n.35G>T, XM_005254889.2:c.-167G>C, XM_005254889.2:c.-167G>T, NM_001145044.1:c.-167G>C, NM_001145044.1:c.-167G>T

Select item 147775244014.

rs1477752440 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAG>- [Show Flanks]
Chromosome:: 15:91854002 (GRCh38)
15:92397232 (GRCh37)
Canonical SPDI:: NC_000015.10:91853998:AAGAAG:AAG
Gene:: SLCO3A1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,coding_sequence_variant,inframe_deletion
Validated:: by frequency,by cluster
MAF:: -=0.000005/1 (GnomAD_exomes)
-=0.000035/1 (TOMMO)
HGVS:: NC_000015.10:g.91853999AAG[1], NC_000015.9:g.92397229AAG[1], NM_013272.4:c.91AAG[1], NM_013272.3:c.91AAG[1], XR_931796.3:n.292AAG[1], XR_931796.2:n.181AAG[1], XR_931796.1:n.181AAG[1], XM_005254889.2:c.91AAG[1], XM_005254889.1:c.91AAG[1], NM_001145044.1:c.91AAG[1], NP_037404.2:p.Lys32del, XP_005254946.1:p.Lys32del, NP_001138516.1:p.Lys32del

Select item 147670231315.

rs1476702313 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:91916044 (GRCh38)
15:92459274 (GRCh37)
Canonical SPDI:: NC_000015.10:91916043:G:A
Gene:: SLCO3A1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.91916044G>A, NC_000015.9:g.92459274G>A, NM_013272.4:c.232G>A, NM_013272.3:c.232G>A, XM_011521456.3:c.58G>A, XM_011521456.2:c.58G>A, XM_011521456.1:c.58G>A, XR_931796.3:n.433G>A, XR_931796.2:n.322G>A, XR_931796.1:n.322G>A, XM_005254889.2:c.232G>A, XM_005254889.1:c.232G>A, NR_135775.2:n.159G>A, NR_135775.1:n.163G>A, NM_001145044.1:c.232G>A, NP_037404.2:p.Val78Met, XP_011519758.1:p.Val20Met, XP_005254946.1:p.Val78Met, NP_001138516.1:p.Val78Met

Select item 147480457416.

rs1474804574 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:92171915 (GRCh38)
15:92715145 (GRCh37)
Canonical SPDI:: NC_000015.10:92171914:A:C
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000015.10:g.92171915A>C, NC_000015.9:g.92715145A>C, NM_001145044.1:c.*53A>C

Select item 147451193517.

rs1474511935 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:92094936 (GRCh38)
15:92638166 (GRCh37)
Canonical SPDI:: NC_000015.10:92094935:T:C
Gene:: SLCO3A1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: C=0.0001/1 (ALFA)
HGVS:: NC_000015.10:g.92094936T>C, NC_000015.9:g.92638166T>C, NM_013272.4:c.702T>C, NM_013272.3:c.702T>C, XM_011521456.3:c.528T>C, XM_011521456.2:c.528T>C, XM_011521456.1:c.528T>C, XR_931796.3:n.903T>C, XR_931796.2:n.792T>C, XR_931796.1:n.792T>C, XM_005254889.2:c.702T>C, XM_005254889.1:c.702T>C, NR_135775.2:n.629T>C, NR_135775.1:n.633T>C, NM_001145044.1:c.702T>C

Select item 147294429018.

rs1472944290 [Homo sapiens]

Variant type:: DELINS
Alleles:: TATTA>- [Show Flanks]
Chromosome:: 15:92172411 (GRCh38)
15:92715641 (GRCh37)
Canonical SPDI:: NC_000015.10:92172406:ATTATATTA:ATTA
Gene:: SLCO3A1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATTA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.92172411_92172415del, NC_000015.9:g.92715641_92715645del, NM_001145044.1:c.*549_*553del

Select item 147137328219.

rs1471373282 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:92150963 (GRCh38)
15:92694193 (GRCh37)
Canonical SPDI:: NC_000015.10:92150962:G:A
Gene:: SLCO3A1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000015.10:g.92150963G>A, NC_000015.9:g.92694193G>A, NM_013272.4:c.1702G>A, NM_013272.3:c.1702G>A, XM_011521456.3:c.1528G>A, XM_011521456.2:c.1528G>A, XM_011521456.1:c.1528G>A, XR_931796.3:n.1903G>A, XR_931796.2:n.1792G>A, XR_931796.1:n.1792G>A, XM_005254889.2:c.1702G>A, XM_005254889.1:c.1702G>A, NR_135775.2:n.1629G>A, NR_135775.1:n.1633G>A, NM_001145044.1:c.1702G>A, NP_037404.2:p.Glu568Lys, XP_011519758.1:p.Glu510Lys, XP_005254946.1:p.Glu568Lys, NP_001138516.1:p.Glu568Lys

Select item 147122062320.

rs1471220623 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 15:92126236 (GRCh38)
15:92669466 (GRCh37)
Canonical SPDI:: NC_000015.10:92126235:G:T
Gene:: SLCO3A1 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.92126236G>T, NC_000015.9:g.92669466G>T, NM_013272.4:c.1350G>T, NM_013272.3:c.1350G>T, XM_011521456.3:c.1176G>T, XM_011521456.2:c.1176G>T, XM_011521456.1:c.1176G>T, XR_931796.3:n.1551G>T, XR_931796.2:n.1440G>T, XR_931796.1:n.1440G>T, XM_005254889.2:c.1350G>T, XM_005254889.1:c.1350G>T, NR_135775.2:n.1277G>T, NR_135775.1:n.1281G>T, NM_001145044.1:c.1350G>T

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