SNP Links for Nucleotide (Select 1194651594) - SNP

Variant type:: DELINS
Alleles:: CTCT>-,CT [Show Flanks]
Chromosome:: 11:559306 (GRCh38)
11:559306 (GRCh37)
Canonical SPDI:: NC_000011.10:559300:TCTCTCTCT:TCTCT,NC_000011.10:559300:TCTCTCTCT:TCTCTCT
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCTCTCT=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.559302CT[2], NC_000011.10:g.559302CT[3], NC_000011.9:g.559302CT[2], NC_000011.9:g.559302CT[3], NT_187586.1:g.88961CT[2], NT_187586.1:g.88961CT[3], NR_147607.1:n.41CT[2], NR_147607.1:n.41CT[3]

Select item 14741685806.

rs1474168580 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:559396 (GRCh38)
11:559396 (GRCh37)
Canonical SPDI:: NC_000011.10:559395:T:A
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,synonymous_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.559396T>A, NC_000011.9:g.559396T>A, NT_187586.1:g.89055T>A, XM_011519965.3:c.189A>T, XM_011519965.2:c.189A>T, XM_011519965.1:c.6A>T, XM_011519967.3:c.189A>T, XM_011519967.2:c.189A>T, XM_011519967.1:c.6A>T, XM_017017479.3:c.189A>T, XM_017017479.2:c.189A>T, XM_017017479.1:c.189A>T, XM_047426712.1:c.189A>T, XM_047426714.1:c.189A>T, NR_147607.1:n.135T>A

Select item 14726843917.

rs1472684391 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:559917 (GRCh38)
11:559917 (GRCh37)
Canonical SPDI:: NC_000011.10:559916:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.559917C>T, NC_000011.9:g.559917C>T, NT_187586.1:g.89576C>T, XM_011519965.3:c.-333G>A, XM_011519967.3:c.-333G>A, XM_017017479.3:c.-333G>A, XM_047426712.1:c.-333G>A, XM_047426714.1:c.-333G>A, NR_147607.1:n.354C>T, NR_147608.1:n.346C>T

Select item 14691973678.

rs1469197367 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:559326 (GRCh38)
11:559326 (GRCh37)
Canonical SPDI:: NC_000011.10:559325:G:C
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.559326G>C, NC_000011.9:g.559326G>C, NT_187586.1:g.88985G>C, NR_147607.1:n.65G>C

Select item 14674491329.

rs1467449132 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:559274 (GRCh38)
11:559274 (GRCh37)
Canonical SPDI:: NC_000011.10:559273:C:G,NC_000011.10:559273:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.00016/1 (1000Genomes)
HGVS:: NC_000011.10:g.559274C>G, NC_000011.10:g.559274C>T, NC_000011.9:g.559274C>G, NC_000011.9:g.559274C>T, NT_187586.1:g.88933C>G, NT_187586.1:g.88933C>T, NR_147607.1:n.13C>G, NR_147607.1:n.13C>T

Select item 146474146910.

rs1464741469 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:559351 (GRCh38)
11:559351 (GRCh37)
Canonical SPDI:: NC_000011.10:559350:G:C
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,synonymous_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.559351G>C, NC_000011.9:g.559351G>C, NT_187586.1:g.89010G>C, XM_011519965.3:c.234C>G, XM_011519965.2:c.234C>G, XM_011519965.1:c.51C>G, XM_011519967.3:c.234C>G, XM_011519967.2:c.234C>G, XM_011519967.1:c.51C>G, XM_017017479.3:c.234C>G, XM_017017479.2:c.234C>G, XM_017017479.1:c.234C>G, XM_047426712.1:c.234C>G, XM_047426714.1:c.234C>G, NR_147607.1:n.90G>C

Select item 146222646411.

rs1462226464 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:559431 (GRCh38)
11:559431 (GRCh37)
Canonical SPDI:: NC_000011.10:559430:G:A,NC_000011.10:559430:G:C
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: missense_variant,non_coding_transcript_variant,2KB_upstream_variant,stop_gained,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.559431G>A, NC_000011.10:g.559431G>C, NC_000011.9:g.559431G>A, NC_000011.9:g.559431G>C, NT_187586.1:g.89090G>A, NT_187586.1:g.89090G>C, XM_011519965.3:c.154C>T, XM_011519965.3:c.154C>G, XM_011519965.2:c.154C>T, XM_011519965.2:c.154C>G, XM_011519965.1:c.-30C>T, XM_011519965.1:c.-30C>G, XM_011519967.3:c.154C>T, XM_011519967.3:c.154C>G, XM_011519967.2:c.154C>T, XM_011519967.2:c.154C>G, XM_011519967.1:c.-30C>T, XM_011519967.1:c.-30C>G, XM_017017479.3:c.154C>T, XM_017017479.3:c.154C>G, XM_017017479.2:c.154C>T, XM_017017479.2:c.154C>G, XM_017017479.1:c.154C>T, XM_017017479.1:c.154C>G, XM_047426712.1:c.154C>T, XM_047426712.1:c.154C>G, XM_047426714.1:c.154C>T, XM_047426714.1:c.154C>G, NR_147607.1:n.170G>A, NR_147607.1:n.170G>C, XP_011518267.2:p.Gln52Ter, XP_011518267.2:p.Gln52Glu, XP_011518269.2:p.Gln52Ter, XP_011518269.2:p.Gln52Glu, XP_016872968.1:p.Gln52Ter, XP_016872968.1:p.Gln52Glu, XP_047282668.1:p.Gln52Ter, XP_047282668.1:p.Gln52Glu, XP_047282670.1:p.Gln52Ter, XP_047282670.1:p.Gln52Glu

Select item 146075813012.

rs1460758130 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTCT>- [Show Flanks]
Chromosome:: 11:559300 (GRCh38)
11:559300 (GRCh37)
Canonical SPDI:: NC_000011.10:559296:TCTTTCT:TCT
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TCT=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.559300_559303del, NC_000011.9:g.559300_559303del, NT_187586.1:g.88959_88962del, NR_147607.1:n.39_42del

Select item 145755029413.

rs1457550294 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:559933 (GRCh38)
11:559933 (GRCh37)
Canonical SPDI:: NC_000011.10:559932:C:A
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,5_prime_UTR_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.559933C>A, NC_000011.9:g.559933C>A, NT_187586.1:g.89592C>A, XM_011519965.3:c.-349G>T, XM_011519967.3:c.-349G>T, XM_017017479.3:c.-349G>T, XM_047426712.1:c.-349G>T, XM_047426714.1:c.-349G>T, NR_147607.1:n.370C>A, NR_147608.1:n.362C>A

Select item 143741595514.

rs1437415955 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:559421 (GRCh38)
11:559421 (GRCh37)
Canonical SPDI:: NC_000011.10:559420:G:C,NC_000011.10:559420:G:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,non_coding_transcript_variant,2KB_upstream_variant,missense_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.559421G>C, NC_000011.10:g.559421G>T, NC_000011.9:g.559421G>C, NC_000011.9:g.559421G>T, NT_187586.1:g.89080G>C, NT_187586.1:g.89080G>T, XM_011519965.3:c.164C>G, XM_011519965.3:c.164C>A, XM_011519965.2:c.164C>G, XM_011519965.2:c.164C>A, XM_011519965.1:c.-20C>G, XM_011519965.1:c.-20C>A, XM_011519967.3:c.164C>G, XM_011519967.3:c.164C>A, XM_011519967.2:c.164C>G, XM_011519967.2:c.164C>A, XM_011519967.1:c.-20C>G, XM_011519967.1:c.-20C>A, XM_017017479.3:c.164C>G, XM_017017479.3:c.164C>A, XM_017017479.2:c.164C>G, XM_017017479.2:c.164C>A, XM_017017479.1:c.164C>G, XM_017017479.1:c.164C>A, XM_047426712.1:c.164C>G, XM_047426712.1:c.164C>A, XM_047426714.1:c.164C>G, XM_047426714.1:c.164C>A, NR_147607.1:n.160G>C, NR_147607.1:n.160G>T, XP_011518267.2:p.Pro55Arg, XP_011518267.2:p.Pro55His, XP_011518269.2:p.Pro55Arg, XP_011518269.2:p.Pro55His, XP_016872968.1:p.Pro55Arg, XP_016872968.1:p.Pro55His, XP_047282668.1:p.Pro55Arg, XP_047282668.1:p.Pro55His, XP_047282670.1:p.Pro55Arg, XP_047282670.1:p.Pro55His

Select item 143568988415.

rs1435689884 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:559294 (GRCh38)
11:559294 (GRCh37)
Canonical SPDI:: NC_000011.10:559293:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.559294C>T, NC_000011.9:g.559294C>T, NT_187586.1:g.88953C>T, NR_147607.1:n.33C>T

Select item 143298357216.

rs1432983572 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:559408 (GRCh38)
11:559408 (GRCh37)
Canonical SPDI:: NC_000011.10:559407:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,non_coding_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant,synonymous_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.559408C>T, NC_000011.9:g.559408C>T, NT_187586.1:g.89067C>T, XM_011519965.3:c.177G>A, XM_011519965.2:c.177G>A, XM_011519965.1:c.-7G>A, XM_011519967.3:c.177G>A, XM_011519967.2:c.177G>A, XM_011519967.1:c.-7G>A, XM_017017479.3:c.177G>A, XM_017017479.2:c.177G>A, XM_017017479.1:c.177G>A, XM_047426712.1:c.177G>A, XM_047426714.1:c.177G>A, NR_147607.1:n.147C>T

Select item 143276178917.

rs1432761789 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:559830 (GRCh38)
11:559830 (GRCh37)
Canonical SPDI:: NC_000011.10:559829:G:C
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,2KB_upstream_variant,5_prime_UTR_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.559830G>C, NC_000011.9:g.559830G>C, NT_187586.1:g.89489G>C, XM_011519965.3:c.-246C>G, XM_011519967.3:c.-246C>G, XM_017017479.3:c.-246C>G, XM_047426712.1:c.-246C>G, XM_047426714.1:c.-246C>G, NR_147607.1:n.267G>C, NR_147608.1:n.259G>C

Select item 142097570718.

rs1420975707 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:559329 (GRCh38)
11:559329 (GRCh37)
Canonical SPDI:: NC_000011.10:559328:C:G,NC_000011.10:559328:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.559329C>G, NC_000011.10:g.559329C>T, NC_000011.9:g.559329C>G, NC_000011.9:g.559329C>T, NT_187586.1:g.88988C>G, NT_187586.1:g.88988C>T, NR_147607.1:n.68C>G, NR_147607.1:n.68C>T

Select item 141824358619.

rs1418243586 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:559417 (GRCh38)
11:559417 (GRCh37)
Canonical SPDI:: NC_000011.10:559416:G:A
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,synonymous_variant,non_coding_transcript_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.559417G>A, NC_000011.9:g.559417G>A, NT_187586.1:g.89076G>A, XM_011519965.3:c.168C>T, XM_011519965.2:c.168C>T, XM_011519965.1:c.-16C>T, XM_011519967.3:c.168C>T, XM_011519967.2:c.168C>T, XM_011519967.1:c.-16C>T, XM_017017479.3:c.168C>T, XM_017017479.2:c.168C>T, XM_017017479.1:c.168C>T, XM_047426712.1:c.168C>T, XM_047426714.1:c.168C>T, NR_147607.1:n.156G>A

Select item 141342841120.

rs1413428411 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:559449 (GRCh38)
11:559449 (GRCh37)
Canonical SPDI:: NC_000011.10:559448:C:T
Gene:: RASSF7 (Varview), LMNTD2 (Varview), LMNTD2-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,genic_upstream_transcript_variant,2KB_upstream_variant,intron_variant,missense_variant,non_coding_transcript_variant,upstream_transcript_variant
HGVS:: NC_000011.10:g.559449C>T, NC_000011.9:g.559449C>T, NT_187586.1:g.89108C>T, XM_011519965.3:c.136G>A, XM_011519965.2:c.136G>A, XM_011519967.3:c.136G>A, XM_011519967.2:c.136G>A, XM_017017479.3:c.136G>A, XM_017017479.2:c.136G>A, XM_017017479.1:c.136G>A, XM_047426712.1:c.136G>A, XM_047426714.1:c.136G>A, NR_147607.1:n.188C>T, XP_011518267.2:p.Glu46Lys, XP_011518269.2:p.Glu46Lys, XP_016872968.1:p.Glu46Lys, XP_047282668.1:p.Glu46Lys, XP_047282670.1:p.Glu46Lys

<< First< Prev

Page of 9

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Nucleotide

Items: 1 to 20 of 168

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity