SNP Links for Nucleotide (Select 1073522705) - SNP

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Select item 14915772791.

rs1491577279 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:113829824 (GRCh38)
11:113700546 (GRCh37)
Canonical SPDI:: NC_000011.10:113829823:CA:
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00059/7 (ALFA)
-=0.00106/30 (TOMMO)
HGVS:: NC_000011.10:g.113829824_113829825del, NC_000011.9:g.113700546_113700547del, NG_051668.1:g.50746_50747del

Select item 14915321492.

rs1491532149 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 11:113798092 (GRCh38)
11:113668814 (GRCh37)
Canonical SPDI:: NC_000011.10:113798090:TGT:T
Gene:: USP28 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.113798092_113798093del, NC_000011.9:g.113668814_113668815del, NG_051668.1:g.82479_82480del, NM_001346252.4:c.*1148_*1149del, NM_001346252.3:c.*1148_*1149del, NM_001346252.2:c.*1148_*1149del, NM_001346252.1:c.*1148_*1149del, NM_020886.4:c.*1148_*1149del, NM_020886.3:c.*1148_*1149del, NM_020886.2:c.*1148_*1149del, NM_001346270.2:c.*1148_*1149del, NM_001346270.1:c.*1148_*1149del, NM_001346255.2:c.*1148_*1149del, NM_001346255.1:c.*1148_*1149del, NM_001346265.2:c.*1148_*1149del, NM_001346265.1:c.*1148_*1149del, NM_001346263.2:c.*1148_*1149del, NM_001346263.1:c.*1148_*1149del, NM_001346253.2:c.*1148_*1149del, NM_001346253.1:c.*1148_*1149del, NM_001346271.2:c.*1148_*1149del, NM_001346271.1:c.*1148_*1149del, NM_001346264.2:c.*1148_*1149del, NM_001346264.1:c.*1148_*1149del, NM_001346254.2:c.*1148_*1149del, NM_001346254.1:c.*1148_*1149del, NM_001346257.2:c.*1148_*1149del, NM_001346257.1:c.*1148_*1149del, NM_001346258.2:c.*1148_*1149del, NM_001346258.1:c.*1148_*1149del, NM_001346269.2:c.*1148_*1149del, NM_001346269.1:c.*1148_*1149del, NM_001346267.2:c.*1148_*1149del, NM_001346267.1:c.*1148_*1149del, NM_001346259.2:c.*1148_*1149del, NM_001346259.1:c.*1148_*1149del, NM_001346260.2:c.*1148_*1149del, NM_001346260.1:c.*1148_*1149del, NM_001346261.2:c.*1148_*1149del, NM_001346261.1:c.*1148_*1149del, NM_001346272.2:c.*1148_*1149del, NM_001346272.1:c.*1148_*1149del, NM_001346262.2:c.*1148_*1149del, NM_001346262.1:c.*1148_*1149del, NM_001301029.2:c.*1148_*1149del, NM_001301029.1:c.*1148_*1149del, NM_001346268.2:c.*1148_*1149del, NM_001346268.1:c.*1148_*1149del, NM_001400797.1:c.*1148_*1149del, NM_001400796.1:c.*1148_*1149del, NM_001400804.1:c.*1148_*1149del, NM_001400785.1:c.*1148_*1149del, NM_001400795.1:c.*1148_*1149del, NM_001400812.1:c.*1148_*1149del, NM_001400784.1:c.*1148_*1149del, NM_001400786.1:c.*1148_*1149del, NM_001400811.1:c.*1148_*1149del, NM_001400806.1:c.*1148_*1149del, NM_001400805.1:c.*1148_*1149del, NM_001400787.1:c.*1148_*1149del, NM_001400788.1:c.*1148_*1149del, NM_001400803.1:c.*1148_*1149del, NM_001400789.1:c.*1148_*1149del, NM_001400790.1:c.*1148_*1149del, NM_001400791.1:c.*1148_*1149del, NM_001400802.1:c.*1148_*1149del, NM_001400792.1:c.*1148_*1149del, NM_001400810.1:c.*1148_*1149del, NM_001400800.1:c.*1148_*1149del, NM_001400793.1:c.*1148_*1149del, NM_001400813.1:c.*1148_*1149del, NM_001400809.1:c.*1148_*1149del, NM_001400807.1:c.*1148_*1149del, NM_001400801.1:c.*1148_*1149del, NR_174609.1:n.3991_3992del, NM_001400799.1:c.*1148_*1149del

Select item 14914473203.

rs1491447320 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 11:113826337 (GRCh38)
11:113697059 (GRCh37)
Canonical SPDI:: NC_000011.10:113826336:AT:
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.001855/22 (ALFA)
-=0.00214/228 (GnomAD)
HGVS:: NC_000011.10:g.113826337_113826338del, NC_000011.9:g.113697059_113697060del, NG_051668.1:g.54233_54234del

Select item 14914072164.

rs1491407216 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>-,GAGA [Show Flanks]
Chromosome:: 11:113826298 (GRCh38)
11:113697020 (GRCh37)
Canonical SPDI:: NC_000011.10:113826296:AGA:A,NC_000011.10:113826296:AGA:AGAGA
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AGAGA=0./0 (ALFA)
HGVS:: NC_000011.10:g.113826298_113826299del, NC_000011.10:g.113826298_113826299dup, NC_000011.9:g.113697020_113697021del, NC_000011.9:g.113697020_113697021dup, NG_051668.1:g.54273_54274del, NG_051668.1:g.54273_54274dup

Select item 14914060825.

rs1491406082 has merged into rs201539318 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>-,GCGC,GCGCGC [Show Flanks]
Chromosome:: 11:113877916 (GRCh38)
11:113748638 (GRCh37)
Canonical SPDI:: NC_000011.10:113877914:CGC:C,NC_000011.10:113877914:CGC:CGCGC,NC_000011.10:113877914:CGC:CGCGCGC
Validated:: by frequency,by alfa,by cluster
MAF:: CGCGC=0.01483/224 (ALFA)
CG=0.00007/1 (TOMMO)
CG=0.00055/1 (Korea1K)
CG=0.02167/13 (NorthernSweden)
CGCG=0.02496/125 (1000Genomes)
CG=0.05029/225 (Estonian)
CG=0.06012/60 (GoNL)
HGVS:: NC_000011.10:g.113877916_113877917del, NC_000011.10:g.113877916_113877917dup, NC_000011.10:g.113877916GC[3], NC_000011.9:g.113748638_113748639del, NC_000011.9:g.113748638_113748639dup, NC_000011.9:g.113748638GC[3], NG_051668.1:g.2655_2656del, NG_051668.1:g.2655_2656dup, NG_051668.1:g.2655CG[3]

Select item 14913783846.

rs1491378384 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->C
Chromosome:: no mapping
Canonical SPDI:

Select item 14913729867.

rs1491372986 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 11:113814004 (GRCh38)
11:113684726 (GRCh37)
Canonical SPDI:: NC_000011.10:113814002:TAT:T
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: -=0.000005/1 (GnomAD_exomes)
-=0.000011/1 (ExAC)
HGVS:: NC_000011.10:g.113814004_113814005del, NC_000011.9:g.113684726_113684727del, NG_051668.1:g.66567_66568del

Select item 14912338658.

rs1491233865 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 11:113842272 (GRCh38)
11:113712995 (GRCh37)
Canonical SPDI:: NC_000011.10:113842272::T
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000017/2 (GnomAD)
HGVS:: NC_000011.10:g.113842272_113842273insT, NC_000011.9:g.113712994_113712995insT, NG_051668.1:g.38298_38299insA

Select item 14912277669.

rs1491227766 has merged into rs71063530 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 11:113878111 (GRCh38)
11:113748833 (GRCh37)
Canonical SPDI:: NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:113878101:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
T=0.460663/2307 (1000Genomes)
HGVS:: NC_000011.10:g.113878111_113878120del, NC_000011.10:g.113878113_113878120del, NC_000011.10:g.113878114_113878120del, NC_000011.10:g.113878115_113878120del, NC_000011.10:g.113878116_113878120del, NC_000011.10:g.113878117_113878120del, NC_000011.10:g.113878118_113878120del, NC_000011.10:g.113878119_113878120del, NC_000011.10:g.113878120del, NC_000011.10:g.113878120dup, NC_000011.10:g.113878119_113878120dup, NC_000011.10:g.113878118_113878120dup, NC_000011.10:g.113878117_113878120dup, NC_000011.10:g.113878116_113878120dup, NC_000011.10:g.113878115_113878120dup, NC_000011.10:g.113878114_113878120dup, NC_000011.10:g.113878113_113878120dup, NC_000011.9:g.113748833_113748842del, NC_000011.9:g.113748835_113748842del, NC_000011.9:g.113748836_113748842del, NC_000011.9:g.113748837_113748842del, NC_000011.9:g.113748838_113748842del, NC_000011.9:g.113748839_113748842del, NC_000011.9:g.113748840_113748842del, NC_000011.9:g.113748841_113748842del, NC_000011.9:g.113748842del, NC_000011.9:g.113748842dup, NC_000011.9:g.113748841_113748842dup, NC_000011.9:g.113748840_113748842dup, NC_000011.9:g.113748839_113748842dup, NC_000011.9:g.113748838_113748842dup, NC_000011.9:g.113748837_113748842dup, NC_000011.9:g.113748836_113748842dup, NC_000011.9:g.113748835_113748842dup, NG_051668.1:g.2460_2469del, NG_051668.1:g.2462_2469del, NG_051668.1:g.2463_2469del, NG_051668.1:g.2464_2469del, NG_051668.1:g.2465_2469del, NG_051668.1:g.2466_2469del, NG_051668.1:g.2467_2469del, NG_051668.1:g.2468_2469del, NG_051668.1:g.2469del, NG_051668.1:g.2469dup, NG_051668.1:g.2468_2469dup, NG_051668.1:g.2467_2469dup, NG_051668.1:g.2466_2469dup, NG_051668.1:g.2465_2469dup, NG_051668.1:g.2464_2469dup, NG_051668.1:g.2463_2469dup, NG_051668.1:g.2462_2469dup

Select item 149119020910.

rs1491190209 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 11:113798091 (GRCh38)
11:113668814 (GRCh37)
Canonical SPDI:: NC_000011.10:113798091:G:GG
Gene:: USP28 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
G=0.00025/21 (GnomAD)
HGVS:: NC_000011.10:g.113798092dup, NC_000011.9:g.113668814dup, NG_051668.1:g.82479dup, NM_001346252.4:c.*1148dup, NM_001346252.3:c.*1148dup, NM_001346252.2:c.*1148dup, NM_001346252.1:c.*1148dup, NM_020886.4:c.*1148dup, NM_020886.3:c.*1148dup, NM_020886.2:c.*1148dup, NM_001346270.2:c.*1148dup, NM_001346270.1:c.*1148dup, NM_001346255.2:c.*1148dup, NM_001346255.1:c.*1148dup, NM_001346265.2:c.*1148dup, NM_001346265.1:c.*1148dup, NM_001346263.2:c.*1148dup, NM_001346263.1:c.*1148dup, NM_001346253.2:c.*1148dup, NM_001346253.1:c.*1148dup, NM_001346271.2:c.*1148dup, NM_001346271.1:c.*1148dup, NM_001346264.2:c.*1148dup, NM_001346264.1:c.*1148dup, NM_001346254.2:c.*1148dup, NM_001346254.1:c.*1148dup, NM_001346257.2:c.*1148dup, NM_001346257.1:c.*1148dup, NM_001346258.2:c.*1148dup, NM_001346258.1:c.*1148dup, NM_001346269.2:c.*1148dup, NM_001346269.1:c.*1148dup, NM_001346267.2:c.*1148dup, NM_001346267.1:c.*1148dup, NM_001346259.2:c.*1148dup, NM_001346259.1:c.*1148dup, NM_001346260.2:c.*1148dup, NM_001346260.1:c.*1148dup, NM_001346261.2:c.*1148dup, NM_001346261.1:c.*1148dup, NM_001346272.2:c.*1148dup, NM_001346272.1:c.*1148dup, NM_001346262.2:c.*1148dup, NM_001346262.1:c.*1148dup, NM_001301029.2:c.*1148dup, NM_001301029.1:c.*1148dup, NM_001346268.2:c.*1148dup, NM_001346268.1:c.*1148dup, NM_001400797.1:c.*1148dup, NM_001400796.1:c.*1148dup, NM_001400804.1:c.*1148dup, NM_001400785.1:c.*1148dup, NM_001400795.1:c.*1148dup, NM_001400812.1:c.*1148dup, NM_001400784.1:c.*1148dup, NM_001400786.1:c.*1148dup, NM_001400811.1:c.*1148dup, NM_001400806.1:c.*1148dup, NM_001400805.1:c.*1148dup, NM_001400787.1:c.*1148dup, NM_001400788.1:c.*1148dup, NM_001400803.1:c.*1148dup, NM_001400789.1:c.*1148dup, NM_001400790.1:c.*1148dup, NM_001400791.1:c.*1148dup, NM_001400802.1:c.*1148dup, NM_001400792.1:c.*1148dup, NM_001400810.1:c.*1148dup, NM_001400800.1:c.*1148dup, NM_001400793.1:c.*1148dup, NM_001400813.1:c.*1148dup, NM_001400809.1:c.*1148dup, NM_001400807.1:c.*1148dup, NM_001400801.1:c.*1148dup, NR_174609.1:n.3991dup, NM_001400799.1:c.*1148dup

Select item 149118340711.

rs1491183407 has merged into rs35806711 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 11:113853313 (GRCh38)
11:113724035 (GRCh37)
Canonical SPDI:: NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113853301:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000011.10:g.113853313_113853328del, NC_000011.10:g.113853314_113853328del, NC_000011.10:g.113853315_113853328del, NC_000011.10:g.113853316_113853328del, NC_000011.10:g.113853317_113853328del, NC_000011.10:g.113853318_113853328del, NC_000011.10:g.113853319_113853328del, NC_000011.10:g.113853320_113853328del, NC_000011.10:g.113853321_113853328del, NC_000011.10:g.113853322_113853328del, NC_000011.10:g.113853323_113853328del, NC_000011.10:g.113853324_113853328del, NC_000011.10:g.113853325_113853328del, NC_000011.10:g.113853326_113853328del, NC_000011.10:g.113853327_113853328del, NC_000011.10:g.113853328del, NC_000011.10:g.113853328dup, NC_000011.10:g.113853327_113853328dup, NC_000011.10:g.113853326_113853328dup, NC_000011.10:g.113853325_113853328dup, NC_000011.10:g.113853324_113853328dup, NC_000011.10:g.113853322_113853328dup, NC_000011.10:g.113853317_113853328dup, NC_000011.10:g.113853314_113853328dup, NC_000011.9:g.113724035_113724050del, NC_000011.9:g.113724036_113724050del, NC_000011.9:g.113724037_113724050del, NC_000011.9:g.113724038_113724050del, NC_000011.9:g.113724039_113724050del, NC_000011.9:g.113724040_113724050del, NC_000011.9:g.113724041_113724050del, NC_000011.9:g.113724042_113724050del, NC_000011.9:g.113724043_113724050del, NC_000011.9:g.113724044_113724050del, NC_000011.9:g.113724045_113724050del, NC_000011.9:g.113724046_113724050del, NC_000011.9:g.113724047_113724050del, NC_000011.9:g.113724048_113724050del, NC_000011.9:g.113724049_113724050del, NC_000011.9:g.113724050del, NC_000011.9:g.113724050dup, NC_000011.9:g.113724049_113724050dup, NC_000011.9:g.113724048_113724050dup, NC_000011.9:g.113724047_113724050dup, NC_000011.9:g.113724046_113724050dup, NC_000011.9:g.113724044_113724050dup, NC_000011.9:g.113724039_113724050dup, NC_000011.9:g.113724036_113724050dup, NG_051668.1:g.27254_27269del, NG_051668.1:g.27255_27269del, NG_051668.1:g.27256_27269del, NG_051668.1:g.27257_27269del, NG_051668.1:g.27258_27269del, NG_051668.1:g.27259_27269del, NG_051668.1:g.27260_27269del, NG_051668.1:g.27261_27269del, NG_051668.1:g.27262_27269del, NG_051668.1:g.27263_27269del, NG_051668.1:g.27264_27269del, NG_051668.1:g.27265_27269del, NG_051668.1:g.27266_27269del, NG_051668.1:g.27267_27269del, NG_051668.1:g.27268_27269del, NG_051668.1:g.27269del, NG_051668.1:g.27269dup, NG_051668.1:g.27268_27269dup, NG_051668.1:g.27267_27269dup, NG_051668.1:g.27266_27269dup, NG_051668.1:g.27265_27269dup, NG_051668.1:g.27263_27269dup, NG_051668.1:g.27258_27269dup, NG_051668.1:g.27255_27269dup

Select item 149112713412.

rs1491127134 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:113853301 (GRCh38)
11:113724023 (GRCh37)
Canonical SPDI:: NC_000011.10:113853300:CA:
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.02639/313 (ALFA)
-=0.00013/5 (GnomAD)
-=0.00416/68 (TOMMO)
HGVS:: NC_000011.10:g.113853301_113853302del, NC_000011.9:g.113724023_113724024del, NG_051668.1:g.27269_27270del

Select item 149102061013.

rs1491020610 has merged into rs199733288 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 11:113796704 (GRCh38)
11:113667426 (GRCh37)
Canonical SPDI:: NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:113796689:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.39/1953 (1000Genomes)
HGVS:: NC_000011.10:g.113796704_113796707del, NC_000011.10:g.113796705_113796707del, NC_000011.10:g.113796706_113796707del, NC_000011.10:g.113796707del, NC_000011.10:g.113796707dup, NC_000011.10:g.113796706_113796707dup, NC_000011.10:g.113796705_113796707dup, NC_000011.10:g.113796704_113796707dup, NC_000011.10:g.113796703_113796707dup, NC_000011.10:g.113796702_113796707dup, NC_000011.10:g.113796700_113796707dup, NC_000011.10:g.113796695_113796707dup, NC_000011.9:g.113667426_113667429del, NC_000011.9:g.113667427_113667429del, NC_000011.9:g.113667428_113667429del, NC_000011.9:g.113667429del, NC_000011.9:g.113667429dup, NC_000011.9:g.113667428_113667429dup, NC_000011.9:g.113667427_113667429dup, NC_000011.9:g.113667426_113667429dup, NC_000011.9:g.113667425_113667429dup, NC_000011.9:g.113667424_113667429dup, NC_000011.9:g.113667422_113667429dup, NC_000011.9:g.113667417_113667429dup, NG_051668.1:g.83878_83881del, NG_051668.1:g.83879_83881del, NG_051668.1:g.83880_83881del, NG_051668.1:g.83881del, NG_051668.1:g.83881dup, NG_051668.1:g.83880_83881dup, NG_051668.1:g.83879_83881dup, NG_051668.1:g.83878_83881dup, NG_051668.1:g.83877_83881dup, NG_051668.1:g.83876_83881dup, NG_051668.1:g.83874_83881dup, NG_051668.1:g.83869_83881dup

Select item 149098535814.

rs1490985358 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:113817414 (GRCh38)
11:113688136 (GRCh37)
Canonical SPDI:: NC_000011.10:113817413:G:C
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.113817414G>C, NC_000011.9:g.113688136G>C, NG_051668.1:g.63157C>G

Select item 149098155515.

rs1490981555 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:113835382 (GRCh38)
11:113706104 (GRCh37)
Canonical SPDI:: NC_000011.10:113835381:G:A,NC_000011.10:113835381:G:T
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.113835382G>A, NC_000011.10:g.113835382G>T, NC_000011.9:g.113706104G>A, NC_000011.9:g.113706104G>T, NG_051668.1:g.45189C>T, NG_051668.1:g.45189C>A

Select item 149095481316.

rs1490954813 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:113816444 (GRCh38)
11:113687166 (GRCh37)
Canonical SPDI:: NC_000011.10:113816443:C:A,NC_000011.10:113816443:C:T
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00016/1 (1000Genomes)
HGVS:: NC_000011.10:g.113816444C>A, NC_000011.10:g.113816444C>T, NC_000011.9:g.113687166C>A, NC_000011.9:g.113687166C>T, NG_051668.1:g.64127G>T, NG_051668.1:g.64127G>A

Select item 149092782817.

rs1490927828 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:113797667 (GRCh38)
11:113668389 (GRCh37)
Canonical SPDI:: NC_000011.10:113797666:A:G
Gene:: USP28 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.113797667A>G, NC_000011.9:g.113668389A>G, NG_051668.1:g.82904T>C

Select item 149091862318.

rs1490918623 has merged into rs58107096 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAA>-,A,AA,AAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 11:113868938 (GRCh38)
11:113739660 (GRCh37)
Canonical SPDI:: NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000011.10:113868925:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.0012/6 (1000Genomes)
A=0.325/13 (GENOME_DK)
HGVS:: NC_000011.10:g.113868938_113868941del, NC_000011.10:g.113868939_113868941del, NC_000011.10:g.113868940_113868941del, NC_000011.10:g.113868941del, NC_000011.10:g.113868941dup, NC_000011.10:g.113868940_113868941dup, NC_000011.9:g.113739660_113739663del, NC_000011.9:g.113739661_113739663del, NC_000011.9:g.113739662_113739663del, NC_000011.9:g.113739663del, NC_000011.9:g.113739663dup, NC_000011.9:g.113739662_113739663dup, NG_051668.1:g.11642_11645del, NG_051668.1:g.11643_11645del, NG_051668.1:g.11644_11645del, NG_051668.1:g.11645del, NG_051668.1:g.11645dup, NG_051668.1:g.11644_11645dup

Select item 149091624619.

rs1490916246 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:113799963 (GRCh38)
11:113670685 (GRCh37)
Canonical SPDI:: NC_000011.10:113799962:T:A
Gene:: USP28 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.113799963T>A, NC_000011.9:g.113670685T>A, NG_051668.1:g.80608A>T

Select item 149089881220.

rs1490898812 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:113854603 (GRCh38)
11:113725325 (GRCh37)
Canonical SPDI:: NC_000011.10:113854602:T:C
Gene:: USP28 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.113854603T>C, NC_000011.9:g.113725325T>C, NG_051668.1:g.25968A>G

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