SNP Links for Nucleotide (Select 1017029604) - SNP

Links from Nucleotide

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Select item 14904811771.

rs1490481177 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:82715924 (GRCh38)
17:80673800 (GRCh37)
Canonical SPDI:: NC_000017.11:82715923:G:A
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000017.11:g.82715924G>A, NC_000017.10:g.80673800G>A, NR_136400.1:n.330C>T

Select item 14886350552.

rs1488635055 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:82714079 (GRCh38)
17:80671955 (GRCh37)
Canonical SPDI:: NC_000017.11:82714078:A:G
Gene:: LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.82714079A>G, NC_000017.10:g.80671955A>G, NR_136400.1:n.725T>C

Select item 14819803803.

rs1481980380 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:82713982 (GRCh38)
17:80671858 (GRCh37)
Canonical SPDI:: NC_000017.11:82713981:G:A
Gene:: LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.82713982G>A, NC_000017.10:g.80671858G>A, NR_136400.1:n.822C>T

Select item 14815236074.

rs1481523607 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 17:82715800 (GRCh38)
17:80673676 (GRCh37)
Canonical SPDI:: NC_000017.11:82715799:GG:
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.82715800_82715801del, NC_000017.10:g.80673676_80673677del, NR_136400.1:n.453_454del

Select item 14806685825.

rs1480668582 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:82716013 (GRCh38)
17:80673889 (GRCh37)
Canonical SPDI:: NC_000017.11:82716012:T:C
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000017.11:g.82716013T>C, NC_000017.10:g.80673889T>C, NR_136400.1:n.241A>G

Select item 14776272486.

rs1477627248 [Homo sapiens]

Variant type:: DEL
Alleles:: TCAT>- [Show Flanks]
Chromosome:: 17:82716117 (GRCh38)
17:80673993 (GRCh37)
Canonical SPDI:: NC_000017.11:82716116:TCAT:
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.82716117_82716120del, NC_000017.10:g.80673993_80673996del, NR_136400.1:n.134_137del

Select item 14738822227.

rs1473882222 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:82716074 (GRCh38)
17:80673950 (GRCh37)
Canonical SPDI:: NC_000017.11:82716073:C:T
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
T=0.000684/2 (KOREAN)
HGVS:: NC_000017.11:g.82716074C>T, NC_000017.10:g.80673950C>T, NR_136400.1:n.180G>A

Select item 14733003018.

rs1473300301 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:82714103 (GRCh38)
17:80671979 (GRCh37)
Canonical SPDI:: NC_000017.11:82714102:A:G
Gene:: LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.82714103A>G, NC_000017.10:g.80671979A>G, NR_136400.1:n.701T>C

Select item 14711534389.

rs1471153438 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:82715604 (GRCh38)
17:80673480 (GRCh37)
Canonical SPDI:: NC_000017.11:82715603:A:T
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.82715604A>T, NC_000017.10:g.80673480A>T, NR_136400.1:n.650T>A

Select item 146703782710.

rs1467037827 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:82715622 (GRCh38)
17:80673498 (GRCh37)
Canonical SPDI:: NC_000017.11:82715621:G:A
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000034/9 (TOPMED)
HGVS:: NC_000017.11:g.82715622G>A, NC_000017.10:g.80673498G>A, NR_136400.1:n.632C>T

Select item 146627849811.

rs1466278498 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:82713934 (GRCh38)
17:80671810 (GRCh37)
Canonical SPDI:: NC_000017.11:82713933:G:C
Gene:: LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.82713934G>C, NC_000017.10:g.80671810G>C, NR_136400.1:n.870C>G

Select item 146284965712.

rs1462849657 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTAAAA [Show Flanks]
Chromosome:: 17:82715716 (GRCh38)
17:80673593 (GRCh37)
Canonical SPDI:: NC_000017.11:82715716:ACTAAAA:ACTAAAACTAAAA
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: ACTAAAACTAAAA=0./0 (ALFA)
ACTAAA=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.82715718_82715723dup, NC_000017.10:g.80673594_80673599dup, NR_136400.1:n.532_537dup

Select item 145914524613.

rs1459145246 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:82715933 (GRCh38)
17:80673809 (GRCh37)
Canonical SPDI:: NC_000017.11:82715932:A:T
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.82715933A>T, NC_000017.10:g.80673809A>T, NR_136400.1:n.321T>A

Select item 145497167414.

rs1454971674 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:82715993 (GRCh38)
17:80673869 (GRCh37)
Canonical SPDI:: NC_000017.11:82715992:T:G
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.82715993T>G, NC_000017.10:g.80673869T>G, NR_136400.1:n.261A>C

Select item 145140939315.

rs1451409393 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 17:82716230 (GRCh38)
17:80674106 (GRCh37)
Canonical SPDI:: NC_000017.11:82716229:C:
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.82716230del, NC_000017.10:g.80674106del, NR_136400.1:n.24del

Select item 144886647016.

rs1448866470 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 17:82716137 (GRCh38)
17:80674013 (GRCh37)
Canonical SPDI:: NC_000017.11:82716136:GGG:GG
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.82716139del, NC_000017.10:g.80674015del, NR_136400.1:n.117del

Select item 144833932317.

rs1448339323 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:82715743 (GRCh38)
17:80673619 (GRCh37)
Canonical SPDI:: NC_000017.11:82715742:T:C
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.82715743T>C, NC_000017.10:g.80673619T>C, NR_136400.1:n.511A>G

Select item 144746098118.

rs1447460981 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 17:82715576 (GRCh38)
17:80673452 (GRCh37)
Canonical SPDI:: NC_000017.11:82715575:G:C,NC_000017.11:82715575:G:T
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000017.11:g.82715576G>C, NC_000017.11:g.82715576G>T, NC_000017.10:g.80673452G>C, NC_000017.10:g.80673452G>T, NR_136400.1:n.678C>G, NR_136400.1:n.678C>A

Select item 144226248319.

rs1442262483 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 17:82716248 (GRCh38)
17:80674124 (GRCh37)
Canonical SPDI:: NC_000017.11:82716247:T:A,NC_000017.11:82716247:T:C
Gene:: FN3KRP (Varview), LOC101929552 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000017.11:g.82716248T>A, NC_000017.11:g.82716248T>C, NC_000017.10:g.80674124T>A, NC_000017.10:g.80674124T>C, NR_136400.1:n.6A>T, NR_136400.1:n.6A>G

Select item 143918154320.

rs1439181543 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:82713908 (GRCh38)
17:80671784 (GRCh37)
Canonical SPDI:: NC_000017.11:82713907:G:A,NC_000017.11:82713907:G:T
Gene:: LOC101929552 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000017.11:g.82713908G>A, NC_000017.11:g.82713908G>T, NC_000017.10:g.80671784G>A, NC_000017.10:g.80671784G>T, NR_136400.1:n.896C>T, NR_136400.1:n.896C>A

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