SNP Links for Nucleotide (Select 1012443814) - SNP

Links from Nucleotide

Items: 1 to 20 of 135

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Select item 14859414841.

rs1485941484 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 1:219469705 (GRCh38)
1:219643047 (GRCh37)
Canonical SPDI:: NC_000001.11:219469704:TT:T
Gene:: LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000019/5 (TOPMED)
-=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.219469706del, NC_000001.10:g.219643048del, NR_135822.1:n.273del

Select item 14824426152.

rs1482442615 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:219435184 (GRCh38)
1:219608526 (GRCh37)
Canonical SPDI:: NC_000001.11:219435183:T:C
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219435184T>C, NC_000001.10:g.219608526T>C, NR_135822.1:n.661A>G

Select item 14791848793.

rs1479184879 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:219557280 (GRCh38)
1:219730622 (GRCh37)
Canonical SPDI:: NC_000001.11:219557279:C:G,NC_000001.11:219557279:C:T
Gene:: LYPLAL1-AS1 (Varview), LOC124904514 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.219557280C>G, NC_000001.11:g.219557280C>T, NC_000001.10:g.219730622C>G, NC_000001.10:g.219730622C>T, NR_135822.1:n.45G>C, NR_135822.1:n.45G>A, XR_007066882.1:n.166C>G, XR_007066882.1:n.166C>T

Select item 14754200494.

rs1475420049 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:219469793 (GRCh38)
1:219643135 (GRCh37)
Canonical SPDI:: NC_000001.11:219469792:C:G,NC_000001.11:219469792:C:T
Gene:: LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.219469793C>G, NC_000001.11:g.219469793C>T, NC_000001.10:g.219643135C>G, NC_000001.10:g.219643135C>T, NR_135822.1:n.185G>C, NR_135822.1:n.185G>A

Select item 14728184155.

rs1472818415 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:219437131 (GRCh38)
1:219610473 (GRCh37)
Canonical SPDI:: NC_000001.11:219437130:A:T
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000094/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.219437131A>T, NC_000001.10:g.219610473A>T, NR_135822.1:n.356T>A

Select item 14673594456.

rs1467359445 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:219469770 (GRCh38)
1:219643112 (GRCh37)
Canonical SPDI:: NC_000001.11:219469769:A:G
Gene:: LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.219469770A>G, NC_000001.10:g.219643112A>G, NR_135822.1:n.208T>C

Select item 14657362287.

rs1465736228 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:219557319 (GRCh38)
1:219730661 (GRCh37)
Canonical SPDI:: NC_000001.11:219557318:G:A
Gene:: LYPLAL1-AS1 (Varview), LOC124904514 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.219557319G>A, NC_000001.10:g.219730661G>A, NR_135822.1:n.6C>T, XR_007066882.1:n.205G>A

Select item 14603362178.

rs1460336217 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:219557227 (GRCh38)
1:219730569 (GRCh37)
Canonical SPDI:: NC_000001.11:219557226:G:A,NC_000001.11:219557226:G:T
Gene:: LYPLAL1-AS1 (Varview), LOC124904514 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.219557227G>A, NC_000001.11:g.219557227G>T, NC_000001.10:g.219730569G>A, NC_000001.10:g.219730569G>T, NR_135822.1:n.98C>T, NR_135822.1:n.98C>A, XR_007066882.1:n.113G>A, XR_007066882.1:n.113G>T

Select item 14568681049.

rs1456868104 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:219435409 (GRCh38)
1:219608751 (GRCh37)
Canonical SPDI:: NC_000001.11:219435408:A:G
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219435409A>G, NC_000001.10:g.219608751A>G, NR_135822.1:n.436T>C

Select item 143908515710.

rs1439085157 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:219435254 (GRCh38)
1:219608596 (GRCh37)
Canonical SPDI:: NC_000001.11:219435253:G:A
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.219435254G>A, NC_000001.10:g.219608596G>A, NR_135822.1:n.591C>T

Select item 143665457611.

rs1436654576 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:219437066 (GRCh38)
1:219610408 (GRCh37)
Canonical SPDI:: NC_000001.11:219437065:T:C
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.219437066T>C, NC_000001.10:g.219610408T>C, NR_135822.1:n.421A>G

Select item 142536441812.

rs1425364418 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:219557265 (GRCh38)
1:219730607 (GRCh37)
Canonical SPDI:: NC_000001.11:219557264:C:A
Gene:: LYPLAL1-AS1 (Varview), LOC124904514 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219557265C>A, NC_000001.10:g.219730607C>A, NR_135822.1:n.60G>T, XR_007066882.1:n.151C>A

Select item 142466002613.

rs1424660026 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:219469688 (GRCh38)
1:219643030 (GRCh37)
Canonical SPDI:: NC_000001.11:219469687:C:G
Gene:: LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.219469688C>G, NC_000001.10:g.219643030C>G, NR_135822.1:n.290G>C

Select item 142264160714.

rs1422641607 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:219437147 (GRCh38)
1:219610489 (GRCh37)
Canonical SPDI:: NC_000001.11:219437146:C:A
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.219437147C>A, NC_000001.10:g.219610489C>A, NR_135822.1:n.340G>T

Select item 142249677115.

rs1422496771 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:219435263 (GRCh38)
1:219608605 (GRCh37)
Canonical SPDI:: NC_000001.11:219435262:A:G
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219435263A>G, NC_000001.10:g.219608605A>G, NR_135822.1:n.582T>C

Select item 142212974916.

rs1422129749 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:219437077 (GRCh38)
1:219610419 (GRCh37)
Canonical SPDI:: NC_000001.11:219437076:C:G
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219437077C>G, NC_000001.10:g.219610419C>G, NR_135822.1:n.410G>C

Select item 141674998317.

rs1416749983 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:219437165 (GRCh38)
1:219610507 (GRCh37)
Canonical SPDI:: NC_000001.11:219437164:T:C
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.219437165T>C, NC_000001.10:g.219610507T>C, NR_135822.1:n.322A>G

Select item 141360497918.

rs1413604979 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:219557246 (GRCh38)
1:219730588 (GRCh37)
Canonical SPDI:: NC_000001.11:219557245:G:A,NC_000001.11:219557245:G:T
Gene:: LYPLAL1-AS1 (Varview), LOC124904514 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.219557246G>A, NC_000001.11:g.219557246G>T, NC_000001.10:g.219730588G>A, NC_000001.10:g.219730588G>T, NR_135822.1:n.79C>T, NR_135822.1:n.79C>A, XR_007066882.1:n.132G>A, XR_007066882.1:n.132G>T

Select item 141348774119.

rs1413487741 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:219435268 (GRCh38)
1:219608610 (GRCh37)
Canonical SPDI:: NC_000001.11:219435267:T:C
Gene:: LYPLAL1 (Varview), LYPLAL1-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.219435268T>C, NC_000001.10:g.219608610T>C, NR_135822.1:n.577A>G

Select item 141286215320.

rs1412862153 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 1:219469680 (GRCh38)
1:219643023 (GRCh37)
Canonical SPDI:: NC_000001.11:219469680::T
Gene:: LYPLAL1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.219469680_219469681insT, NC_000001.10:g.219643022_219643023insT, NR_135822.1:n.297_298insA

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