SNP Links for Gene (Select 9560) - SNP

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Select item 14904256541.

rs1490425654 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:36211700 (GRCh38)
17:34539102 (GRCh37)
Canonical SPDI:: NC_000017.11:36211699:T:C
Gene:: CCL4L2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.36211700T>C, NG_026174.1:g.50223T>C, NT_187661.1:g.165837T>C, NC_000017.10:g.34539102T>C, NT_187614.1:g.446604T>C, NW_003315949.1:g.96456T>C

Select item 14904112982.

rs1490411298 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:36210762 (GRCh38)
17:34538164 (GRCh37)
Canonical SPDI:: NC_000017.11:36210761:C:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
T=0.000044/6 (GnomAD)
HGVS:: NC_000017.11:g.36210762C>T, NG_026174.1:g.49285C>T, NT_187661.1:g.164899C>T, NC_000017.10:g.34538164C>T, NT_187614.1:g.445666C>T, NW_003315949.1:g.95518C>T

Select item 14902630053.

rs1490263005 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:36212039 (GRCh38)
17:34539441 (GRCh37)
Canonical SPDI:: NC_000017.11:36212038:A:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000142/2 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.36212039A>G, NG_026174.1:g.50562A>G, NT_187661.1:g.166176A>G, NC_000017.10:g.34539441A>G, NT_187614.1:g.446943A>G, NW_003315949.1:g.96795A>G, NM_001291470.2:c.*145A>G, NM_001291470.1:c.*145A>G

Select item 14893782474.

rs1489378247 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:36209790 (GRCh38)
17:34537192 (GRCh37)
Canonical SPDI:: NC_000017.11:36209789:G:C
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.001352/19 (ALFA)
C=0.000625/4 (1000Genomes)
C=0.00144/196 (GnomAD)
HGVS:: NC_000017.11:g.36209790G>C, NG_026174.1:g.48313G>C, NT_187661.1:g.163927G>C, NC_000017.10:g.34537192G>C, NT_187614.1:g.444694G>C, NW_003315949.1:g.94546G>C

Select item 14891603405.

rs1489160340 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:36212632 (GRCh38)
17:34540034 (GRCh37)
Canonical SPDI:: NC_000017.11:36212631:C:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.36212632C>T, NG_026174.1:g.51155C>T, NT_187661.1:g.166769C>T, NC_000017.10:g.34540034C>T, NT_187614.1:g.447536C>T, NW_003315949.1:g.97388C>T, NM_001291470.2:c.*738C>T, NM_001291470.1:c.*738C>T, NM_001291469.2:c.*336C>T, NM_001291469.1:c.*336C>T, NM_001291475.2:c.*209C>T, NM_001291475.1:c.*209C>T, NM_001291471.2:c.*199C>T, NM_001291471.1:c.*199C>T, NM_001291472.2:c.*199C>T, NM_001291472.1:c.*199C>T, NM_001291473.2:c.*199C>T, NM_001291473.1:c.*199C>T, NM_001291474.2:c.*209C>T, NM_001291474.1:c.*209C>T, NM_001291468.2:c.*63C>T, NM_001291468.1:c.*63C>T, NR_111970.2:n.291C>T, NR_111970.1:n.291C>T, NM_207007.2:c.*63C>T, NM_207007.3:c.*63C>T, NM_001001435.2:c.*63C>T

Select item 14881642756.

rs1488164275 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:36210396 (GRCh38)
17:34537798 (GRCh37)
Canonical SPDI:: NC_000017.11:36210395:T:C
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.36210396T>C, NG_026174.1:g.48919T>C, NT_187661.1:g.164533T>C, NC_000017.10:g.34537798T>C, NT_187614.1:g.445300T>C, NW_003315949.1:g.95152T>C

Select item 14877766507.

rs1487776650 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:36210059 (GRCh38)
17:34537461 (GRCh37)
Canonical SPDI:: NC_000017.11:36210058:C:G,NC_000017.11:36210058:C:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
G=0.000015/2 (GnomAD)
HGVS:: NC_000017.11:g.36210059C>G, NC_000017.11:g.36210059C>T, NG_026174.1:g.48582C>G, NG_026174.1:g.48582C>T, NT_187661.1:g.164196C>G, NT_187661.1:g.164196C>T, NC_000017.10:g.34537461C>G, NC_000017.10:g.34537461C>T, NT_187614.1:g.444963C>G, NT_187614.1:g.444963C>T, NW_003315949.1:g.94815C>G, NW_003315949.1:g.94815C>T

Select item 14877409268.

rs1487740926 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:36210145 (GRCh38)
17:34537547 (GRCh37)
Canonical SPDI:: NC_000017.11:36210144:C:G,NC_000017.11:36210144:C:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.36210145C>G, NC_000017.11:g.36210145C>T, NG_026174.1:g.48668C>G, NG_026174.1:g.48668C>T, NT_187661.1:g.164282C>G, NT_187661.1:g.164282C>T, NC_000017.10:g.34537547C>G, NC_000017.10:g.34537547C>T, NT_187614.1:g.445049C>G, NT_187614.1:g.445049C>T, NW_003315949.1:g.94901C>G, NW_003315949.1:g.94901C>T

Select item 14877097469.

rs1487709746 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:36209445 (GRCh38)
17:34536847 (GRCh37)
Canonical SPDI:: NC_000017.11:36209444:C:A
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.001433/17 (ALFA)
A=0.000781/5 (1000Genomes)
A=0.001131/156 (GnomAD)
HGVS:: NC_000017.11:g.36209445C>A, NG_026174.1:g.47968C>A, NT_187661.1:g.163582C>A, NC_000017.10:g.34536847C>A, NT_187614.1:g.444349C>A, NW_003315949.1:g.94201C>A

Select item 148738131310.

rs1487381313 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:36209717 (GRCh38)
17:34537119 (GRCh37)
Canonical SPDI:: NC_000017.11:36209716:A:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.36209717A>G, NG_026174.1:g.48240A>G, NT_187661.1:g.163854A>G, NC_000017.10:g.34537119A>G, NT_187614.1:g.444621A>G, NW_003315949.1:g.94473A>G

Select item 148713382011.

rs1487133820 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 17:36211216 (GRCh38)
17:34538618 (GRCh37)
Canonical SPDI:: NC_000017.11:36211215:A:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.36211216A>T, NG_026174.1:g.49739A>T, NT_187661.1:g.165353A>T, NC_000017.10:g.34538618A>T, NT_187614.1:g.446120A>T, NW_003315949.1:g.95972A>T, NM_001291470.2:c.75A>T, NM_001291470.1:c.75A>T, NM_001291469.2:c.75A>T, NM_001291469.1:c.75A>T, NM_001291475.2:c.75A>T, NM_001291475.1:c.75A>T, NM_001291471.2:c.75A>T, NM_001291471.1:c.75A>T, NM_001291472.2:c.75A>T, NM_001291472.1:c.75A>T, NM_001291473.2:c.75A>T, NM_001291473.1:c.75A>T, NM_001291474.2:c.75A>T, NM_001291474.1:c.75A>T, NM_001291468.2:c.75A>T, NM_001291468.1:c.75A>T, NR_111970.2:n.154A>T, NR_111970.1:n.154A>T, NM_207007.2:c.75A>T, NM_207007.3:c.75A>T, NM_001001435.2:c.75A>T

Select item 148683082212.

rs1486830822 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 17:36213261 (GRCh38)
17:34540662 (GRCh37)
Canonical SPDI:: NC_000017.11:36213260:T:A,NC_000017.11:36213260:T:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00016/1 (1000Genomes)
HGVS:: NC_000017.11:g.36213261T>A, NC_000017.11:g.36213261T>G, NG_026174.1:g.51783T>A, NG_026174.1:g.51783T>G, NT_187661.1:g.167397T>A, NT_187661.1:g.167397T>G, NC_000017.10:g.34540662T>A, NC_000017.10:g.34540662T>G, NT_187614.1:g.448165T>A, NT_187614.1:g.448165T>G, NW_003315949.1:g.98017T>A, NW_003315949.1:g.98017T>G

Select item 148556457913.

rs1485564579 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:36210675 (GRCh38)
17:34538077 (GRCh37)
Canonical SPDI:: NC_000017.11:36210674:C:G,NC_000017.11:36210674:C:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.36210675C>G, NC_000017.11:g.36210675C>T, NG_026174.1:g.49198C>G, NG_026174.1:g.49198C>T, NT_187661.1:g.164812C>G, NT_187661.1:g.164812C>T, NC_000017.10:g.34538077C>G, NC_000017.10:g.34538077C>T, NT_187614.1:g.445579C>G, NT_187614.1:g.445579C>T, NW_003315949.1:g.95431C>G, NW_003315949.1:g.95431C>T

Select item 148537387814.

rs1485373878 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:36211936 (GRCh38)
17:34539338 (GRCh37)
Canonical SPDI:: NC_000017.11:36211935:G:A,NC_000017.11:36211935:G:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.36211936G>A, NC_000017.11:g.36211936G>T, NG_026174.1:g.50459G>A, NG_026174.1:g.50459G>T, NT_187661.1:g.166073G>A, NT_187661.1:g.166073G>T, NC_000017.10:g.34539338G>A, NC_000017.10:g.34539338G>T, NT_187614.1:g.446840G>A, NT_187614.1:g.446840G>T, NW_003315949.1:g.96692G>A, NW_003315949.1:g.96692G>T, NM_001291470.2:c.*42G>A, NM_001291470.2:c.*42G>T, NM_001291470.1:c.*42G>A, NM_001291470.1:c.*42G>T

Select item 148535486115.

rs1485354861 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:36210858 (GRCh38)
17:34538260 (GRCh37)
Canonical SPDI:: NC_000017.11:36210857:C:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000017.11:g.36210858C>G, NG_026174.1:g.49381C>G, NT_187661.1:g.164995C>G, NC_000017.10:g.34538260C>G, NT_187614.1:g.445762C>G, NW_003315949.1:g.95614C>G

Select item 148517014216.

rs1485170142 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:36212052 (GRCh38)
17:34539454 (GRCh37)
Canonical SPDI:: NC_000017.11:36212051:A:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000073/10 (GnomAD)
HGVS:: NC_000017.11:g.36212052A>G, NG_026174.1:g.50575A>G, NT_187661.1:g.166189A>G, NC_000017.10:g.34539454A>G, NT_187614.1:g.446956A>G, NW_003315949.1:g.96808A>G, NM_001291470.2:c.*158A>G, NM_001291470.1:c.*158A>G

Select item 148508507517.

rs1485085075 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:36210204 (GRCh38)
17:34537606 (GRCh37)
Canonical SPDI:: NC_000017.11:36210203:G:A
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000084/1 (ALFA)
A=0.00008/11 (GnomAD)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000017.11:g.36210204G>A, NG_026174.1:g.48727G>A, NT_187661.1:g.164341G>A, NC_000017.10:g.34537606G>A, NT_187614.1:g.445108G>A, NW_003315949.1:g.94960G>A

Select item 148452279518.

rs1484522795 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:36212570 (GRCh38)
17:34539972 (GRCh37)
Canonical SPDI:: NC_000017.11:36212569:G:A,NC_000017.11:36212569:G:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by cluster
HGVS:: NC_000017.11:g.36212570G>A, NC_000017.11:g.36212570G>T, NG_026174.1:g.51093G>A, NG_026174.1:g.51093G>T, NT_187661.1:g.166707G>A, NT_187661.1:g.166707G>T, NC_000017.10:g.34539972G>A, NC_000017.10:g.34539972G>T, NT_187614.1:g.447474G>A, NT_187614.1:g.447474G>T, NW_003315949.1:g.97326G>A, NW_003315949.1:g.97326G>T, NM_001291470.2:c.*676G>A, NM_001291470.2:c.*676G>T, NM_001291470.1:c.*676G>A, NM_001291470.1:c.*676G>T, NM_001291469.2:c.*274G>A, NM_001291469.2:c.*274G>T, NM_001291469.1:c.*274G>A, NM_001291469.1:c.*274G>T, NM_001291475.2:c.*147G>A, NM_001291475.2:c.*147G>T, NM_001291475.1:c.*147G>A, NM_001291475.1:c.*147G>T, NM_001291471.2:c.*137G>A, NM_001291471.2:c.*137G>T, NM_001291471.1:c.*137G>A, NM_001291471.1:c.*137G>T, NM_001291472.2:c.*137G>A, NM_001291472.2:c.*137G>T, NM_001291472.1:c.*137G>A, NM_001291472.1:c.*137G>T, NM_001291473.2:c.*137G>A, NM_001291473.2:c.*137G>T, NM_001291473.1:c.*137G>A, NM_001291473.1:c.*137G>T, NM_001291474.2:c.*147G>A, NM_001291474.2:c.*147G>T, NM_001291474.1:c.*147G>A, NM_001291474.1:c.*147G>T, NM_001291468.2:c.*1G>A, NM_001291468.2:c.*1G>T, NM_001291468.1:c.*1G>A, NM_001291468.1:c.*1G>T, NR_111970.2:n.229G>A, NR_111970.2:n.229G>T, NR_111970.1:n.229G>A, NR_111970.1:n.229G>T, NM_207007.2:c.*1G>A, NM_207007.2:c.*1G>T, NM_207007.3:c.*1G>A, NM_207007.3:c.*1G>T, NM_001001435.2:c.*1G>A, NM_001001435.2:c.*1G>T

Select item 148447187819.

rs1484471878 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:36209524 (GRCh38)
17:34536926 (GRCh37)
Canonical SPDI:: NC_000017.11:36209523:G:A,NC_000017.11:36209523:G:T
Gene:: CCL4L2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.36209524G>A, NC_000017.11:g.36209524G>T, NG_026174.1:g.48047G>A, NG_026174.1:g.48047G>T, NT_187661.1:g.163661G>A, NT_187661.1:g.163661G>T, NC_000017.10:g.34536926G>A, NC_000017.10:g.34536926G>T, NT_187614.1:g.444428G>A, NT_187614.1:g.444428G>T, NW_003315949.1:g.94280G>A, NW_003315949.1:g.94280G>T

Select item 148435245320.

rs1484352453 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:36212579 (GRCh38)
17:34539981 (GRCh37)
Canonical SPDI:: NC_000017.11:36212578:A:G
Gene:: CCL4L2 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.36212579A>G, NG_026174.1:g.51102A>G, NT_187661.1:g.166716A>G, NC_000017.10:g.34539981A>G, NT_187614.1:g.447483A>G, NW_003315949.1:g.97335A>G, NM_001291470.2:c.*685A>G, NM_001291470.1:c.*685A>G, NM_001291469.2:c.*283A>G, NM_001291469.1:c.*283A>G, NM_001291475.2:c.*156A>G, NM_001291475.1:c.*156A>G, NM_001291471.2:c.*146A>G, NM_001291471.1:c.*146A>G, NM_001291472.2:c.*146A>G, NM_001291472.1:c.*146A>G, NM_001291473.2:c.*146A>G, NM_001291473.1:c.*146A>G, NM_001291474.2:c.*156A>G, NM_001291474.1:c.*156A>G, NM_001291468.2:c.*10A>G, NM_001291468.1:c.*10A>G, NR_111970.2:n.238A>G, NR_111970.1:n.238A>G, NM_207007.2:c.*10A>G, NM_207007.3:c.*10A>G, NM_001001435.2:c.*10A>G

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