SNP Links for Gene (Select 93624) - SNP

Links from Gene

Items: 1 to 20 of 4694

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Select item 14908257381.

rs1490825738 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:7048100 (GRCh38)
4:7049827 (GRCh37)
Canonical SPDI:: NC_000004.12:7048099:A:G
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.7048100A>G, NC_000004.11:g.7049827A>G

Select item 14906902022.

rs1490690202 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 4:7046904 (GRCh38)
4:7048632 (GRCh37)
Canonical SPDI:: NC_000004.12:7046904:AA:AAA
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.7046906dup, NC_000004.11:g.7048633dup

Select item 14906192903.

rs1490619290 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 4:7047716 (GRCh38)
4:7049443 (GRCh37)
Canonical SPDI:: NC_000004.12:7047715:GG:G
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.7047717del, NC_000004.11:g.7049444del

Select item 14903765294.

rs1490376529 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7054744 (GRCh38)
4:7056471 (GRCh37)
Canonical SPDI:: NC_000004.12:7054743:G:A
Gene:: TADA2B (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.7054744G>A, NC_000004.11:g.7056471G>A, NM_152293.3:c.953G>A, NM_152293.2:c.953G>A, NP_689506.2:p.Arg318Lys

Select item 14900131215.

rs1490013121 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:7047143 (GRCh38)
4:7048870 (GRCh37)
Canonical SPDI:: NC_000004.12:7047142:G:T
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000224/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000446/2 (Estonian)
HGVS:: NC_000004.12:g.7047143G>T, NC_000004.11:g.7048870G>T

Select item 14899607616.

rs1489960761 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7045023 (GRCh38)
4:7046750 (GRCh37)
Canonical SPDI:: NC_000004.12:7045022:G:A
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.7045023G>A, NC_000004.11:g.7046750G>A, NR_033828.1:n.653C>T

Select item 14895337447.

rs1489533744 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7042747 (GRCh38)
4:7044474 (GRCh37)
Canonical SPDI:: NC_000004.12:7042746:G:A
Gene:: TADA2B (Varview), CCDC96 (Varview), LOC100129931 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.7042747G>A, NC_000004.11:g.7044474G>A, NM_153376.3:c.192C>T, NM_153376.2:c.192C>T

Select item 14894728138.

rs1489472813 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:7043057 (GRCh38)
4:7044784 (GRCh37)
Canonical SPDI:: NC_000004.12:7043056:G:T
Gene:: TADA2B (Varview), CCDC96 (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.7043057G>T, NC_000004.11:g.7044784G>T

Select item 14893020009.

rs1489302000 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:7045690 (GRCh38)
4:7047417 (GRCh37)
Canonical SPDI:: NC_000004.12:7045689:C:T
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.7045690C>T, NC_000004.11:g.7047417C>T, NR_033828.1:n.542G>A

Select item 148880904710.

rs1488809047 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 4:7057584 (GRCh38)
4:7059311 (GRCh37)
Canonical SPDI:: NC_000004.12:7057583:C:G,NC_000004.12:7057583:C:T
Gene:: TADA2B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.7057584C>G, NC_000004.12:g.7057584C>T, NC_000004.11:g.7059311C>G, NC_000004.11:g.7059311C>T, NM_152293.3:c.*2530C>G, NM_152293.3:c.*2530C>T, NM_152293.2:c.*2530C>G, NM_152293.2:c.*2530C>T

Select item 148877476611.

rs1488774766 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7052623 (GRCh38)
4:7054350 (GRCh37)
Canonical SPDI:: NC_000004.12:7052622:G:A
Gene:: TADA2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.7052623G>A, NC_000004.11:g.7054350G>A

Select item 148867612812.

rs1488676128 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:7053214 (GRCh38)
4:7054941 (GRCh37)
Canonical SPDI:: NC_000004.12:7053213:T:G
Gene:: TADA2B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.7053214T>G, NC_000004.11:g.7054941T>G

Select item 148861928913.

rs1488619289 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7043019 (GRCh38)
4:7044746 (GRCh37)
Canonical SPDI:: NC_000004.12:7043018:G:A
Gene:: TADA2B (Varview), CCDC96 (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.7043019G>A, NC_000004.11:g.7044746G>A

Select item 148856864314.

rs1488568643 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:7043520 (GRCh38)
4:7045247 (GRCh37)
Canonical SPDI:: NC_000004.12:7043519:C:G
Gene:: TADA2B (Varview), CCDC96 (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000016/2 (GnomAD)
HGVS:: NC_000004.12:g.7043520C>G, NC_000004.11:g.7045247C>G, NM_152293.3:c.-60C>G, NM_152293.2:c.-60C>G

Select item 148836395615.

rs1488363956 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:7056499 (GRCh38)
4:7058226 (GRCh37)
Canonical SPDI:: NC_000004.12:7056498:A:T
Gene:: TADA2B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.7056499A>T, NC_000004.11:g.7058226A>T, NM_152293.3:c.*1445A>T, NM_152293.2:c.*1445A>T

Select item 148821077416.

rs1488210774 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:7057727 (GRCh38)
4:7059454 (GRCh37)
Canonical SPDI:: NC_000004.12:7057726:C:T
Gene:: TADA2B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
T=0.000042/11 (TOPMED)
HGVS:: NC_000004.12:g.7057727C>T, NC_000004.11:g.7059454C>T, NM_152293.3:c.*2673C>T, NM_152293.2:c.*2673C>T

Select item 148820180517.

rs1488201805 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:7046332 (GRCh38)
4:7048059 (GRCh37)
Canonical SPDI:: NC_000004.12:7046331:C:T
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.7046332C>T, NC_000004.11:g.7048059C>T

Select item 148745548818.

rs1487455488 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:7056989 (GRCh38)
4:7058716 (GRCh37)
Canonical SPDI:: NC_000004.12:7056988:C:T
Gene:: TADA2B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
T=0.00006/16 (TOPMED)
T=0.000177/3 (TOMMO)
HGVS:: NC_000004.12:g.7056989C>T, NC_000004.11:g.7058716C>T, NM_152293.3:c.*1935C>T, NM_152293.2:c.*1935C>T

Select item 148737908119.

rs1487379081 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:7056035 (GRCh38)
4:7057762 (GRCh37)
Canonical SPDI:: NC_000004.12:7056034:G:A
Gene:: TADA2B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.7056035G>A, NC_000004.11:g.7057762G>A, NM_152293.3:c.*981G>A, NM_152293.2:c.*981G>A

Select item 148733648720.

rs1487336487 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 4:7046420 (GRCh38)
4:7048147 (GRCh37)
Canonical SPDI:: NC_000004.12:7046419:GGGGG:GGGG
Gene:: TADA2B (Varview), LOC100129931 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.00005/7 (GnomAD)
HGVS:: NC_000004.12:g.7046424del, NC_000004.11:g.7048151del

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