SNP Links for Gene (Select 917) - SNP

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Select item 14909296641.

rs1490929664 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:118344712 (GRCh38)
11:118215427 (GRCh37)
Canonical SPDI:: NC_000011.10:118344711:C:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.118344712C>T, NC_000011.9:g.118215427C>T, NG_007566.1:g.5369C>T, NG_009891.1:g.3033G>A

Select item 14909191932.

rs1490919193 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:118343948 (GRCh38)
11:118214663 (GRCh37)
Canonical SPDI:: NC_000011.10:118343947:G:C
Gene:: CD3D (Varview), CD3G (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.118343948G>C, NC_000011.9:g.118214663G>C, NG_007566.1:g.4605G>C, NG_009891.1:g.3797C>G

Select item 14904269923.

rs1490426992 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:118345344 (GRCh38)
11:118216059 (GRCh37)
Canonical SPDI:: NC_000011.10:118345343:G:A,NC_000011.10:118345343:G:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.118345344G>A, NC_000011.10:g.118345344G>T, NC_000011.9:g.118216059G>A, NC_000011.9:g.118216059G>T, NG_007566.1:g.6001G>A, NG_007566.1:g.6001G>T, NG_009891.1:g.2401C>T, NG_009891.1:g.2401C>A

Select item 14903172374.

rs1490317237 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAGGTGAA>- [Show Flanks]
Chromosome:: 11:118351982 (GRCh38)
11:118222697 (GRCh37)
Canonical SPDI:: NC_000011.10:118351979:AAACAGGTGAA:AA
Gene:: CD3G (Varview)
Functional Consequence:: genic_downstream_transcript_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0.000071/1 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.118351982_118351990del, NC_000011.9:g.118222697_118222705del, NG_007566.1:g.12639_12647del

Select item 14902505135.

rs1490250513 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:118351091 (GRCh38)
11:118221806 (GRCh37)
Canonical SPDI:: NC_000011.10:118351090:G:A
Gene:: CD3G (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.118351091G>A, NC_000011.9:g.118221806G>A, NG_007566.1:g.11748G>A, XM_005271724.5:c.*286G>A

Select item 14901280886.

rs1490128088 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:118345439 (GRCh38)
11:118216154 (GRCh37)
Canonical SPDI:: NC_000011.10:118345438:G:C
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.118345439G>C, NC_000011.9:g.118216154G>C, NG_007566.1:g.6096G>C, NG_009891.1:g.2306C>G

Select item 14890329157.

rs1489032915 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:118347262 (GRCh38)
11:118217977 (GRCh37)
Canonical SPDI:: NC_000011.10:118347261:C:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.118347262C>T, NC_000011.9:g.118217977C>T, NG_007566.1:g.7919C>T, NG_009891.1:g.483G>A

Select item 14890025818.

rs1489002581 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:118350249 (GRCh38)
11:118220964 (GRCh37)
Canonical SPDI:: NC_000011.10:118350248:G:A
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000011.10:g.118350249G>A, NC_000011.9:g.118220964G>A, NG_007566.1:g.10906G>A

Select item 14888742199.

rs1488874219 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:118351106 (GRCh38)
11:118221821 (GRCh37)
Canonical SPDI:: NC_000011.10:118351105:T:C
Gene:: CD3G (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.118351106T>C, NC_000011.9:g.118221821T>C, NG_007566.1:g.11763T>C, XM_005271724.5:c.*301T>C

Select item 148878778410.

rs1488787784 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:118350491 (GRCh38)
11:118221206 (GRCh37)
Canonical SPDI:: NC_000011.10:118350490:A:G
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.00003/8 (TOPMED)
G=0.00005/7 (GnomAD)
HGVS:: NC_000011.10:g.118350491A>G, NC_000011.9:g.118221206A>G, NG_007566.1:g.11148A>G

Select item 148877344211.

rs1488773442 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:118350368 (GRCh38)
11:118221083 (GRCh37)
Canonical SPDI:: NC_000011.10:118350367:C:A
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.118350368C>A, NC_000011.9:g.118221083C>A, NG_007566.1:g.11025C>A

Select item 148815672912.

rs1488156729 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:118347833 (GRCh38)
11:118218548 (GRCh37)
Canonical SPDI:: NC_000011.10:118347832:C:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.0002/1 (ALFA)
T=0.0002/1 (Estonian)
HGVS:: NC_000011.10:g.118347833C>T, NC_000011.9:g.118218548C>T, NG_007566.1:g.8490C>T

Select item 148814572313.

rs1488145723 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:118342761 (GRCh38)
11:118213476 (GRCh37)
Canonical SPDI:: NC_000011.10:118342760:G:A
Gene:: CD3D (Varview), CD3G (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.118342761G>A, NC_000011.9:g.118213476G>A, NG_007566.1:g.3418G>A, NG_009891.1:g.4984C>T

Select item 148810364414.

rs1488103644 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:118343129 (GRCh38)
11:118213844 (GRCh37)
Canonical SPDI:: NC_000011.10:118343128:C:G,NC_000011.10:118343128:C:T
Gene:: CD3D (Varview), CD3G (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000011.10:g.118343129C>G, NC_000011.10:g.118343129C>T, NC_000011.9:g.118213844C>G, NC_000011.9:g.118213844C>T, NG_007566.1:g.3786C>G, NG_007566.1:g.3786C>T, NG_009891.1:g.4616G>C, NG_009891.1:g.4616G>A

Select item 148771770915.

rs1487717709 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:118344847 (GRCh38)
11:118215562 (GRCh37)
Canonical SPDI:: NC_000011.10:118344846:A:G
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000546/1 (Korea1K)
HGVS:: NC_000011.10:g.118344847A>G, NC_000011.9:g.118215562A>G, NG_007566.1:g.5504A>G, NG_009891.1:g.2898T>C

Select item 148723684116.

rs1487236841 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:118347884 (GRCh38)
11:118218599 (GRCh37)
Canonical SPDI:: NC_000011.10:118347883:G:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000011.10:g.118347884G>T, NC_000011.9:g.118218599G>T, NG_007566.1:g.8541G>T

Select item 148706941917.

rs1487069419 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:118348519 (GRCh38)
11:118219234 (GRCh37)
Canonical SPDI:: NC_000011.10:118348518:C:T
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.118348519C>T, NC_000011.9:g.118219234C>T, NG_007566.1:g.9176C>T

Select item 148704247218.

rs1487042472 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:118344919 (GRCh38)
11:118215634 (GRCh37)
Canonical SPDI:: NC_000011.10:118344918:G:A
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.118344919G>A, NC_000011.9:g.118215634G>A, NG_007566.1:g.5576G>A, NG_009891.1:g.2826C>T

Select item 148686116919.

rs1486861169 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:118345461 (GRCh38)
11:118216176 (GRCh37)
Canonical SPDI:: NC_000011.10:118345460:T:C
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.118345461T>C, NC_000011.9:g.118216176T>C, NG_007566.1:g.6118T>C, NG_009891.1:g.2284A>G

Select item 148660578820.

rs1486605788 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:118349656 (GRCh38)
11:118220371 (GRCh37)
Canonical SPDI:: NC_000011.10:118349655:A:G
Gene:: CD3G (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.118349656A>G, NC_000011.9:g.118220371A>G, NG_007566.1:g.10313A>G

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