SNP Links for Gene (Select 8724) - SNP

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Select item 14915659931.

rs1491565993 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AA [Show Flanks]
Chromosome:: 6:108223438 (GRCh38)
6:108544643 (GRCh37)
Canonical SPDI:: NC_000006.12:108223438:AAA:AAAAA
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAA=0./0 (ALFA)
AA=0.000004/1 (TOPMED)
AA=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.108223440_108223441dup, NC_000006.11:g.108544644_108544645dup, NG_023278.1:g.42821_42822dup

Select item 14915462172.

rs1491546217 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 6:108229259 (GRCh38)
6:108550463 (GRCh37)
Canonical SPDI:: NC_000006.12:108229258:CA:
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00025/3 (ALFA)
HGVS:: NC_000006.12:g.108229259_108229260del, NC_000006.11:g.108550463_108550464del, NG_023278.1:g.37001_37002del

Select item 14915383733.

rs1491538373 has merged into rs772992471 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:108263232 (GRCh38)
6:108584436 (GRCh37)
Canonical SPDI:: NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108263218:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.3/12 (GENOME_DK)
HGVS:: NC_000006.12:g.108263232_108263239del, NC_000006.12:g.108263234_108263239del, NC_000006.12:g.108263235_108263239del, NC_000006.12:g.108263236_108263239del, NC_000006.12:g.108263237_108263239del, NC_000006.12:g.108263238_108263239del, NC_000006.12:g.108263239del, NC_000006.12:g.108263239dup, NC_000006.12:g.108263238_108263239dup, NC_000006.12:g.108263237_108263239dup, NC_000006.12:g.108263236_108263239dup, NC_000006.12:g.108263235_108263239dup, NC_000006.12:g.108263234_108263239dup, NC_000006.12:g.108263221_108263239dup, NC_000006.11:g.108584436_108584443del, NC_000006.11:g.108584438_108584443del, NC_000006.11:g.108584439_108584443del, NC_000006.11:g.108584440_108584443del, NC_000006.11:g.108584441_108584443del, NC_000006.11:g.108584442_108584443del, NC_000006.11:g.108584443del, NC_000006.11:g.108584443dup, NC_000006.11:g.108584442_108584443dup, NC_000006.11:g.108584441_108584443dup, NC_000006.11:g.108584440_108584443dup, NC_000006.11:g.108584439_108584443dup, NC_000006.11:g.108584438_108584443dup, NC_000006.11:g.108584425_108584443dup, NG_023278.1:g.3035_3042del, NG_023278.1:g.3037_3042del, NG_023278.1:g.3038_3042del, NG_023278.1:g.3039_3042del, NG_023278.1:g.3040_3042del, NG_023278.1:g.3041_3042del, NG_023278.1:g.3042del, NG_023278.1:g.3042dup, NG_023278.1:g.3041_3042dup, NG_023278.1:g.3040_3042dup, NG_023278.1:g.3039_3042dup, NG_023278.1:g.3038_3042dup, NG_023278.1:g.3037_3042dup, NG_023278.1:g.3024_3042dup

Select item 14915162064.

rs1491516206 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AT,ATTAT,ATTATTAT [Show Flanks]
Chromosome:: 6:108236379 (GRCh38)
6:108557584 (GRCh37)
Canonical SPDI:: NC_000006.12:108236379:T:TAT,NC_000006.12:108236379:T:TATTAT,NC_000006.12:108236379:T:TATTATTAT
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATTAT=0./0 (ALFA)
HGVS:: NC_000006.12:g.108236380_108236381insAT, NC_000006.12:g.108236380_108236381insATTAT, NC_000006.12:g.108236380_108236381insATTATTAT, NC_000006.11:g.108557584_108557585insAT, NC_000006.11:g.108557584_108557585insATTAT, NC_000006.11:g.108557584_108557585insATTATTAT, NG_023278.1:g.29881_29882insTA, NG_023278.1:g.29881_29882insTAATA, NG_023278.1:g.29881_29882insTAATAATA

Select item 14914734975.

rs1491473497 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 6:108221563 (GRCh38)
6:108542767 (GRCh37)
Canonical SPDI:: NC_000006.12:108221562:TG:
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000006.12:g.108221563_108221564del, NC_000006.11:g.108542767_108542768del, NG_023278.1:g.44697_44698del

Select item 14914519596.

rs1491451959 has merged into rs35559458 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAA>-,A,AA,AAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:108226056 (GRCh38)
6:108547260 (GRCh37)
Canonical SPDI:: NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108226046:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000006.12:g.108226056_108226069del, NC_000006.12:g.108226057_108226069del, NC_000006.12:g.108226058_108226069del, NC_000006.12:g.108226059_108226069del, NC_000006.12:g.108226063_108226069del, NC_000006.12:g.108226064_108226069del, NC_000006.12:g.108226065_108226069del, NC_000006.12:g.108226066_108226069del, NC_000006.12:g.108226067_108226069del, NC_000006.12:g.108226068_108226069del, NC_000006.12:g.108226069del, NC_000006.12:g.108226069dup, NC_000006.12:g.108226068_108226069dup, NC_000006.12:g.108226067_108226069dup, NC_000006.12:g.108226066_108226069dup, NC_000006.12:g.108226065_108226069dup, NC_000006.12:g.108226063_108226069dup, NC_000006.11:g.108547260_108547273del, NC_000006.11:g.108547261_108547273del, NC_000006.11:g.108547262_108547273del, NC_000006.11:g.108547263_108547273del, NC_000006.11:g.108547267_108547273del, NC_000006.11:g.108547268_108547273del, NC_000006.11:g.108547269_108547273del, NC_000006.11:g.108547270_108547273del, NC_000006.11:g.108547271_108547273del, NC_000006.11:g.108547272_108547273del, NC_000006.11:g.108547273del, NC_000006.11:g.108547273dup, NC_000006.11:g.108547272_108547273dup, NC_000006.11:g.108547271_108547273dup, NC_000006.11:g.108547270_108547273dup, NC_000006.11:g.108547269_108547273dup, NC_000006.11:g.108547267_108547273dup, NG_023278.1:g.40201_40214del, NG_023278.1:g.40202_40214del, NG_023278.1:g.40203_40214del, NG_023278.1:g.40204_40214del, NG_023278.1:g.40208_40214del, NG_023278.1:g.40209_40214del, NG_023278.1:g.40210_40214del, NG_023278.1:g.40211_40214del, NG_023278.1:g.40212_40214del, NG_023278.1:g.40213_40214del, NG_023278.1:g.40214del, NG_023278.1:g.40214dup, NG_023278.1:g.40213_40214dup, NG_023278.1:g.40212_40214dup, NG_023278.1:g.40211_40214dup, NG_023278.1:g.40210_40214dup, NG_023278.1:g.40208_40214dup

Select item 14914517817.

rs1491451781 has merged into rs1184591793 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTT>-,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 6:108236389 (GRCh38)
6:108557593 (GRCh37)
Canonical SPDI:: NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:108236378:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.108236389_108236401del, NC_000006.12:g.108236393_108236401del, NC_000006.12:g.108236394_108236401del, NC_000006.12:g.108236395_108236401del, NC_000006.12:g.108236396_108236401del, NC_000006.12:g.108236397_108236401del, NC_000006.12:g.108236398_108236401del, NC_000006.12:g.108236399_108236401del, NC_000006.12:g.108236400_108236401del, NC_000006.12:g.108236401del, NC_000006.12:g.108236401dup, NC_000006.12:g.108236400_108236401dup, NC_000006.12:g.108236399_108236401dup, NC_000006.12:g.108236398_108236401dup, NC_000006.12:g.108236397_108236401dup, NC_000006.12:g.108236396_108236401dup, NC_000006.12:g.108236395_108236401dup, NC_000006.12:g.108236388_108236401dup, NC_000006.11:g.108557593_108557605del, NC_000006.11:g.108557597_108557605del, NC_000006.11:g.108557598_108557605del, NC_000006.11:g.108557599_108557605del, NC_000006.11:g.108557600_108557605del, NC_000006.11:g.108557601_108557605del, NC_000006.11:g.108557602_108557605del, NC_000006.11:g.108557603_108557605del, NC_000006.11:g.108557604_108557605del, NC_000006.11:g.108557605del, NC_000006.11:g.108557605dup, NC_000006.11:g.108557604_108557605dup, NC_000006.11:g.108557603_108557605dup, NC_000006.11:g.108557602_108557605dup, NC_000006.11:g.108557601_108557605dup, NC_000006.11:g.108557600_108557605dup, NC_000006.11:g.108557599_108557605dup, NC_000006.11:g.108557592_108557605dup, NG_023278.1:g.29870_29882del, NG_023278.1:g.29874_29882del, NG_023278.1:g.29875_29882del, NG_023278.1:g.29876_29882del, NG_023278.1:g.29877_29882del, NG_023278.1:g.29878_29882del, NG_023278.1:g.29879_29882del, NG_023278.1:g.29880_29882del, NG_023278.1:g.29881_29882del, NG_023278.1:g.29882del, NG_023278.1:g.29882dup, NG_023278.1:g.29881_29882dup, NG_023278.1:g.29880_29882dup, NG_023278.1:g.29879_29882dup, NG_023278.1:g.29878_29882dup, NG_023278.1:g.29877_29882dup, NG_023278.1:g.29876_29882dup, NG_023278.1:g.29869_29882dup

Select item 14914236918.

rs1491423691 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: 6:108223438 (GRCh38)
6:108544642 (GRCh37)
Canonical SPDI:: NC_000006.12:108223437:GA:
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000006.12:g.108223438_108223439del, NC_000006.11:g.108544642_108544643del, NG_023278.1:g.42822_42823del

Select item 14914019079.

rs1491401907 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 6:108260974 (GRCh38)
6:108582178 (GRCh37)
Canonical SPDI:: NC_000006.12:108260973:AG:
Gene:: SNX3 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by cluster
MAF:: -=0./0 (ExAC)
HGVS:: NC_000006.12:g.108260974_108260975del, NC_000006.11:g.108582178_108582179del, NG_023278.1:g.5286_5287del, NM_003795.6:c.-54_-53del, NM_003795.5:c.-54_-53del, NM_003795.4:c.-54_-53del, NM_152827.4:c.-54_-53del, NM_152827.3:c.-54_-53del, NM_152827.2:c.-54_-53del, NM_001300929.2:c.-54_-53del, NM_001300929.1:c.-54_-53del, NM_001300928.2:c.-54_-53del, NM_001300928.1:c.-54_-53del, NM_152828.2:c.-54_-53del, NM_152828.1:c.-54_-53del

Select item 149134075910.

rs1491340759 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 6:108224828 (GRCh38)
6:108546032 (GRCh37)
Canonical SPDI:: NC_000006.12:108224826:ATA:A
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.108224828_108224829del, NC_000006.11:g.108546032_108546033del, NG_023278.1:g.41433_41434del

Select item 149132139911.

rs1491321399 has merged into rs36079918 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 6:108226046 (GRCh38)
6:108547250 (GRCh37)
Canonical SPDI:: NC_000006.12:108226045:CA:
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00126/15 (ALFA)
-=0.00014/4 (TOMMO)
-=0.00162/6 (TWINSUK)
-=0.00389/15 (ALSPAC)
HGVS:: NC_000006.12:g.108226046_108226047del, NC_000006.11:g.108547250_108547251del, NG_023278.1:g.40214_40215del

Select item 149131866512.

rs1491318665 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 6:108241143 (GRCh38)
6:108562347 (GRCh37)
Canonical SPDI:: NC_000006.12:108241142:CA:
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
-=0.00028/7 (TOMMO)
HGVS:: NC_000006.12:g.108241143_108241144del, NC_000006.11:g.108562347_108562348del, NG_023278.1:g.25117_25118del

Select item 149130770413.

rs1491307704 has merged into rs71274311 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:108241154 (GRCh38)
6:108562358 (GRCh37)
Canonical SPDI:: NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
AAAAAAAAAAA=0./0 (GENOME_DK)
HGVS:: NC_000006.12:g.108241154_108241169del, NC_000006.12:g.108241155_108241169del, NC_000006.12:g.108241157_108241169del, NC_000006.12:g.108241158_108241169del, NC_000006.12:g.108241159_108241169del, NC_000006.12:g.108241160_108241169del, NC_000006.12:g.108241161_108241169del, NC_000006.12:g.108241162_108241169del, NC_000006.12:g.108241163_108241169del, NC_000006.12:g.108241164_108241169del, NC_000006.12:g.108241165_108241169del, NC_000006.12:g.108241166_108241169del, NC_000006.12:g.108241167_108241169del, NC_000006.12:g.108241168_108241169del, NC_000006.12:g.108241169del, NC_000006.12:g.108241169dup, NC_000006.12:g.108241168_108241169dup, NC_000006.12:g.108241167_108241169dup, NC_000006.12:g.108241166_108241169dup, NC_000006.12:g.108241165_108241169dup, NC_000006.12:g.108241164_108241169dup, NC_000006.12:g.108241163_108241169dup, NC_000006.12:g.108241161_108241169dup, NC_000006.11:g.108562358_108562373del, NC_000006.11:g.108562359_108562373del, NC_000006.11:g.108562361_108562373del, NC_000006.11:g.108562362_108562373del, NC_000006.11:g.108562363_108562373del, NC_000006.11:g.108562364_108562373del, NC_000006.11:g.108562365_108562373del, NC_000006.11:g.108562366_108562373del, NC_000006.11:g.108562367_108562373del, NC_000006.11:g.108562368_108562373del, NC_000006.11:g.108562369_108562373del, NC_000006.11:g.108562370_108562373del, NC_000006.11:g.108562371_108562373del, NC_000006.11:g.108562372_108562373del, NC_000006.11:g.108562373del, NC_000006.11:g.108562373dup, NC_000006.11:g.108562372_108562373dup, NC_000006.11:g.108562371_108562373dup, NC_000006.11:g.108562370_108562373dup, NC_000006.11:g.108562369_108562373dup, NC_000006.11:g.108562368_108562373dup, NC_000006.11:g.108562367_108562373dup, NC_000006.11:g.108562365_108562373dup, NG_023278.1:g.25102_25117del, NG_023278.1:g.25103_25117del, NG_023278.1:g.25105_25117del, NG_023278.1:g.25106_25117del, NG_023278.1:g.25107_25117del, NG_023278.1:g.25108_25117del, NG_023278.1:g.25109_25117del, NG_023278.1:g.25110_25117del, NG_023278.1:g.25111_25117del, NG_023278.1:g.25112_25117del, NG_023278.1:g.25113_25117del, NG_023278.1:g.25114_25117del, NG_023278.1:g.25115_25117del, NG_023278.1:g.25116_25117del, NG_023278.1:g.25117del, NG_023278.1:g.25117dup, NG_023278.1:g.25116_25117dup, NG_023278.1:g.25115_25117dup, NG_023278.1:g.25114_25117dup, NG_023278.1:g.25113_25117dup, NG_023278.1:g.25112_25117dup, NG_023278.1:g.25111_25117dup, NG_023278.1:g.25109_25117dup

Select item 149119700614.

rs1491197006 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 6:108263219 (GRCh38)
6:108584424 (GRCh37)
Canonical SPDI:: NC_000006.12:108263219::G
HGVS:: NC_000006.12:g.108263219_108263220insG, NC_000006.11:g.108584423_108584424insG, NG_023278.1:g.3041_3042insC

Select item 149117218415.

rs1491172184 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TT [Show Flanks]
Chromosome:: 6:108224827 (GRCh38)
6:108546032 (GRCh37)
Canonical SPDI:: NC_000006.12:108224827:T:TTT
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
TT=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.108224828_108224829insTT, NC_000006.11:g.108546032_108546033insTT, NG_023278.1:g.41433_41434insAA

Select item 149105741116.

rs1491057411 has merged into rs71274311 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 6:108241154 (GRCh38)
6:108562358 (GRCh37)
Canonical SPDI:: NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000006.12:108241143:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
AAAAAAAAAAA=0./0 (GENOME_DK)
HGVS:: NC_000006.12:g.108241154_108241169del, NC_000006.12:g.108241155_108241169del, NC_000006.12:g.108241157_108241169del, NC_000006.12:g.108241158_108241169del, NC_000006.12:g.108241159_108241169del, NC_000006.12:g.108241160_108241169del, NC_000006.12:g.108241161_108241169del, NC_000006.12:g.108241162_108241169del, NC_000006.12:g.108241163_108241169del, NC_000006.12:g.108241164_108241169del, NC_000006.12:g.108241165_108241169del, NC_000006.12:g.108241166_108241169del, NC_000006.12:g.108241167_108241169del, NC_000006.12:g.108241168_108241169del, NC_000006.12:g.108241169del, NC_000006.12:g.108241169dup, NC_000006.12:g.108241168_108241169dup, NC_000006.12:g.108241167_108241169dup, NC_000006.12:g.108241166_108241169dup, NC_000006.12:g.108241165_108241169dup, NC_000006.12:g.108241164_108241169dup, NC_000006.12:g.108241163_108241169dup, NC_000006.12:g.108241161_108241169dup, NC_000006.11:g.108562358_108562373del, NC_000006.11:g.108562359_108562373del, NC_000006.11:g.108562361_108562373del, NC_000006.11:g.108562362_108562373del, NC_000006.11:g.108562363_108562373del, NC_000006.11:g.108562364_108562373del, NC_000006.11:g.108562365_108562373del, NC_000006.11:g.108562366_108562373del, NC_000006.11:g.108562367_108562373del, NC_000006.11:g.108562368_108562373del, NC_000006.11:g.108562369_108562373del, NC_000006.11:g.108562370_108562373del, NC_000006.11:g.108562371_108562373del, NC_000006.11:g.108562372_108562373del, NC_000006.11:g.108562373del, NC_000006.11:g.108562373dup, NC_000006.11:g.108562372_108562373dup, NC_000006.11:g.108562371_108562373dup, NC_000006.11:g.108562370_108562373dup, NC_000006.11:g.108562369_108562373dup, NC_000006.11:g.108562368_108562373dup, NC_000006.11:g.108562367_108562373dup, NC_000006.11:g.108562365_108562373dup, NG_023278.1:g.25102_25117del, NG_023278.1:g.25103_25117del, NG_023278.1:g.25105_25117del, NG_023278.1:g.25106_25117del, NG_023278.1:g.25107_25117del, NG_023278.1:g.25108_25117del, NG_023278.1:g.25109_25117del, NG_023278.1:g.25110_25117del, NG_023278.1:g.25111_25117del, NG_023278.1:g.25112_25117del, NG_023278.1:g.25113_25117del, NG_023278.1:g.25114_25117del, NG_023278.1:g.25115_25117del, NG_023278.1:g.25116_25117del, NG_023278.1:g.25117del, NG_023278.1:g.25117dup, NG_023278.1:g.25116_25117dup, NG_023278.1:g.25115_25117dup, NG_023278.1:g.25114_25117dup, NG_023278.1:g.25113_25117dup, NG_023278.1:g.25112_25117dup, NG_023278.1:g.25111_25117dup, NG_023278.1:g.25109_25117dup

Select item 149104560717.

rs1491045607 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 6:108246734 (GRCh38)
6:108567938 (GRCh37)
Canonical SPDI:: NC_000006.12:108246731:AGAG:AG
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAG=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000006.12:g.108246732AG[1], NC_000006.11:g.108567936AG[1], NG_023278.1:g.19526CT[1]

Select item 149100660118.

rs1491006601 has merged into rs531778288 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA [Show Flanks]
Chromosome:: 6:108258473 (GRCh38)
6:108579677 (GRCh37)
Canonical SPDI:: NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000006.12:108258457:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAAAAAA=0./0 (ALFA)
A=0.07119/42 (NorthernSweden)
HGVS:: NC_000006.12:g.108258473_108258475del, NC_000006.12:g.108258474_108258475del, NC_000006.12:g.108258475del, NC_000006.12:g.108258475dup, NC_000006.12:g.108258474_108258475dup, NC_000006.12:g.108258473_108258475dup, NC_000006.11:g.108579677_108579679del, NC_000006.11:g.108579678_108579679del, NC_000006.11:g.108579679del, NC_000006.11:g.108579679dup, NC_000006.11:g.108579678_108579679dup, NC_000006.11:g.108579677_108579679dup, NG_023278.1:g.7801_7803del, NG_023278.1:g.7802_7803del, NG_023278.1:g.7803del, NG_023278.1:g.7803dup, NG_023278.1:g.7802_7803dup, NG_023278.1:g.7801_7803dup

Select item 149099063119.

rs1490990631 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:108231244 (GRCh38)
6:108552448 (GRCh37)
Canonical SPDI:: NC_000006.12:108231243:C:T
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.108231244C>T, NC_000006.11:g.108552448C>T, NG_023278.1:g.35017G>A

Select item 149088073120.

rs1490880731 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 6:108217102 (GRCh38)
6:108538306 (GRCh37)
Canonical SPDI:: NC_000006.12:108217101:G:A,NC_000006.12:108217101:G:C
Gene:: SNX3 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.108217102G>A, NC_000006.12:g.108217102G>C, NC_000006.11:g.108538306G>A, NC_000006.11:g.108538306G>C, NG_023278.1:g.49159C>T, NG_023278.1:g.49159C>G

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