Links from Gene
Items: 1 to 20 of 23125
1.
rs1491583068 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GCGC>-,GC,GCGCGC,GCGCGCGC
[Show Flanks]
- Chromosome:
- 22:44327238
(GRCh38)
22:44723118
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44327235:GCGCGC:GC,NC_000022.11:44327235:GCGCGC:GCGC,NC_000022.11:44327235:GCGCGC:GCGCGCGC,NC_000022.11:44327235:GCGCGC:GCGCGCGCGC
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GC=0./0
(
ALFA)
-=0.00004/1
(TOMMO)
- HGVS:
2.
rs1491547355 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-
[Show Flanks]
- Chromosome:
- 22:44289496
(GRCh38)
22:44685376
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44289494:TTT:T
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000071/1
(
ALFA)
-=0.000036/5
(GnomAD)
-=0.000064/17
(TOPMED)
- HGVS:
3.
rs1491542372 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GG,GGTAGG
[Show Flanks]
- Chromosome:
- 22:44266529
(GRCh38)
22:44662410
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44266529:G:GGG,NC_000022.11:44266529:G:GGGTAGG
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGG=0./0
(
ALFA)
GG=0.00246/4
(Korea1K)
GG=0.00821/109
(TOMMO)
- HGVS:
4.
rs1491525380 has merged into rs922017518 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 22:44263087
(GRCh38)
22:44658967
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000022.11:44263079:TTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000022.11:g.44263087_44263099del, NC_000022.11:g.44263088_44263099del, NC_000022.11:g.44263090_44263099del, NC_000022.11:g.44263091_44263099del, NC_000022.11:g.44263092_44263099del, NC_000022.11:g.44263093_44263099del, NC_000022.11:g.44263094_44263099del, NC_000022.11:g.44263095_44263099del, NC_000022.11:g.44263096_44263099del, NC_000022.11:g.44263097_44263099del, NC_000022.11:g.44263098_44263099del, NC_000022.11:g.44263099del, NC_000022.11:g.44263099dup, NC_000022.11:g.44263098_44263099dup, NC_000022.11:g.44263097_44263099dup, NC_000022.11:g.44263096_44263099dup, NC_000022.11:g.44263095_44263099dup, NC_000022.11:g.44263094_44263099dup, NC_000022.11:g.44263093_44263099dup, NC_000022.11:g.44263092_44263099dup, NC_000022.11:g.44263091_44263099dup, NC_000022.11:g.44263089_44263099dup, NC_000022.10:g.44658967_44658979del, NC_000022.10:g.44658968_44658979del, NC_000022.10:g.44658970_44658979del, NC_000022.10:g.44658971_44658979del, NC_000022.10:g.44658972_44658979del, NC_000022.10:g.44658973_44658979del, NC_000022.10:g.44658974_44658979del, NC_000022.10:g.44658975_44658979del, NC_000022.10:g.44658976_44658979del, NC_000022.10:g.44658977_44658979del, NC_000022.10:g.44658978_44658979del, NC_000022.10:g.44658979del, NC_000022.10:g.44658979dup, NC_000022.10:g.44658978_44658979dup, NC_000022.10:g.44658977_44658979dup, NC_000022.10:g.44658976_44658979dup, NC_000022.10:g.44658975_44658979dup, NC_000022.10:g.44658974_44658979dup, NC_000022.10:g.44658973_44658979dup, NC_000022.10:g.44658972_44658979dup, NC_000022.10:g.44658971_44658979dup, NC_000022.10:g.44658969_44658979dup
5.
rs1491501955 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 22:44302339
(GRCh38)
22:44698219
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44302338:CA:
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.03633/431
(
ALFA)
-=0.00135/63
(GnomAD)
-=0.01068/301
(TOMMO)
- HGVS:
6.
rs1491492793 has merged into rs879356618 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACAC>-,AC,ACAC,ACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC
[Show Flanks]
- Chromosome:
- 22:44269486
(GRCh38)
22:44665366
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44269474:CACACACACACACACACAC:CACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACACACACACACAC,NC_000022.11:44269474:CACACACACACACACACAC:CACACACACACACACACACACACAC
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACAC=0./0
(
ALFA)
-=0.00167/1
(NorthernSweden)
- HGVS:
NC_000022.11:g.44269476AC[5], NC_000022.11:g.44269476AC[6], NC_000022.11:g.44269476AC[7], NC_000022.11:g.44269476AC[8], NC_000022.11:g.44269476AC[10], NC_000022.11:g.44269476AC[11], NC_000022.11:g.44269476AC[12], NC_000022.10:g.44665356AC[5], NC_000022.10:g.44665356AC[6], NC_000022.10:g.44665356AC[7], NC_000022.10:g.44665356AC[8], NC_000022.10:g.44665356AC[10], NC_000022.10:g.44665356AC[11], NC_000022.10:g.44665356AC[12]
7.
rs1491466041 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CA
[Show Flanks]
- Chromosome:
- 22:44261078
(GRCh38)
22:44656959
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44261078:A:ACA
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
ACA=0./0
(
ALFA)
AC=0.000004/1
(TOPMED)
- HGVS:
8.
rs1491402816 has merged into rs56290835 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TATATATATATA>-,TA,TATATA,TATATATA,TATATATATA,TATATATATATATA,TATATATATATATATA,TATATATATATATATATA,TATATATATATATATATATA,TATATATATATATATATATATA,TATATATATATATATATATATATA,TATATATATATATATATATATATATA,TATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,TATATATATATATATATATATATGTATATATATATATATATATATATATATA
[Show Flanks]
- Chromosome:
- 22:44261088
(GRCh38)
22:44656968
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA,NC_000022.11:44261077:TATATATATATATATATATATA:TATATATATATATATATATATATATATATATATGTATATATATATATATATATATATATATA
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATATA=0./0
(
ALFA)
TA=0.225/9
(GENOME_DK)
TA=0.3724/1865
(1000Genomes)
- HGVS:
NC_000022.11:g.44261078TA[5], NC_000022.11:g.44261078TA[6], NC_000022.11:g.44261078TA[8], NC_000022.11:g.44261078TA[9], NC_000022.11:g.44261078TA[10], NC_000022.11:g.44261078TA[12], NC_000022.11:g.44261078TA[13], NC_000022.11:g.44261078TA[14], NC_000022.11:g.44261078TA[15], NC_000022.11:g.44261078TA[16], NC_000022.11:g.44261078TA[17], NC_000022.11:g.44261078TA[18], NC_000022.11:g.44261078TA[19], NC_000022.11:g.44261078TA[20], NC_000022.11:g.44261078TA[21], NC_000022.11:g.44261078TA[22], NC_000022.11:g.44261078TA[23], NC_000022.11:g.44261078TA[24], NC_000022.11:g.44261078TA[25], NC_000022.11:g.44261078TA[26], NC_000022.11:g.44261078TA[27], NC_000022.11:g.44261078TA[28], NC_000022.11:g.44261078TA[29], NC_000022.11:g.44261078TA[30], NC_000022.11:g.44261078TA[31], NC_000022.11:g.44261078TA[32], NC_000022.11:g.44261078TA[33], NC_000022.11:g.44261078TA[34], NC_000022.11:g.44261078_44261099TA[16]TGTATATATATATATATATATATATATATA[1], NC_000022.10:g.44656958TA[5], NC_000022.10:g.44656958TA[6], NC_000022.10:g.44656958TA[8], NC_000022.10:g.44656958TA[9], NC_000022.10:g.44656958TA[10], NC_000022.10:g.44656958TA[12], NC_000022.10:g.44656958TA[13], NC_000022.10:g.44656958TA[14], NC_000022.10:g.44656958TA[15], NC_000022.10:g.44656958TA[16], NC_000022.10:g.44656958TA[17], NC_000022.10:g.44656958TA[18], NC_000022.10:g.44656958TA[19], NC_000022.10:g.44656958TA[20], NC_000022.10:g.44656958TA[21], NC_000022.10:g.44656958TA[22], NC_000022.10:g.44656958TA[23], NC_000022.10:g.44656958TA[24], NC_000022.10:g.44656958TA[25], NC_000022.10:g.44656958TA[26], NC_000022.10:g.44656958TA[27], NC_000022.10:g.44656958TA[28], NC_000022.10:g.44656958TA[29], NC_000022.10:g.44656958TA[30], NC_000022.10:g.44656958TA[31], NC_000022.10:g.44656958TA[32], NC_000022.10:g.44656958TA[33], NC_000022.10:g.44656958TA[34], NC_000022.10:g.44656958_44656979TA[16]TGTATATATATATATATATATATATATATA[1]
10.
rs1491369173 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 22:44259487
(GRCh38)
22:44655367
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44259485:AGA:A
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
-=0.000093/13
(GnomAD)
- HGVS:
11.
rs1491346490 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 22:44245859
(GRCh38)
22:44641739
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44245858:AT:
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000049/13
(TOPMED)
-=0.00005/7
(GnomAD)
- HGVS:
12.
rs1491297165 has merged into rs11473448 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GTGTGTGTGTGTGTGT>-,GT,GTGT,GTGTGT,GTGTGTGT,GTGTGTGTGT,GTGTGTGTGTGT,GTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
[Show Flanks]
- Chromosome:
- 22:44266544
(GRCh38)
22:44662424
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT,NC_000022.11:44266528:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTGT=0./0
(
ALFA)
- HGVS:
NC_000022.11:g.44266530GT[7], NC_000022.11:g.44266530GT[8], NC_000022.11:g.44266530GT[9], NC_000022.11:g.44266530GT[10], NC_000022.11:g.44266530GT[11], NC_000022.11:g.44266530GT[12], NC_000022.11:g.44266530GT[13], NC_000022.11:g.44266530GT[14], NC_000022.11:g.44266530GT[16], NC_000022.11:g.44266530GT[17], NC_000022.11:g.44266530GT[18], NC_000022.11:g.44266530GT[19], NC_000022.11:g.44266530GT[20], NC_000022.11:g.44266530GT[21], NC_000022.11:g.44266530GT[22], NC_000022.11:g.44266530GT[23], NC_000022.11:g.44266530GT[24], NC_000022.11:g.44266530GT[25], NC_000022.11:g.44266530GT[26], NC_000022.11:g.44266530GT[27], NC_000022.11:g.44266530GT[28], NC_000022.11:g.44266530GT[29], NC_000022.11:g.44266530GT[30], NC_000022.11:g.44266530GT[31], NC_000022.10:g.44662410GT[7], NC_000022.10:g.44662410GT[8], NC_000022.10:g.44662410GT[9], NC_000022.10:g.44662410GT[10], NC_000022.10:g.44662410GT[11], NC_000022.10:g.44662410GT[12], NC_000022.10:g.44662410GT[13], NC_000022.10:g.44662410GT[14], NC_000022.10:g.44662410GT[16], NC_000022.10:g.44662410GT[17], NC_000022.10:g.44662410GT[18], NC_000022.10:g.44662410GT[19], NC_000022.10:g.44662410GT[20], NC_000022.10:g.44662410GT[21], NC_000022.10:g.44662410GT[22], NC_000022.10:g.44662410GT[23], NC_000022.10:g.44662410GT[24], NC_000022.10:g.44662410GT[25], NC_000022.10:g.44662410GT[26], NC_000022.10:g.44662410GT[27], NC_000022.10:g.44662410GT[28], NC_000022.10:g.44662410GT[29], NC_000022.10:g.44662410GT[30], NC_000022.10:g.44662410GT[31]
13.
rs1491273142 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATTT
[Show Flanks]
- Chromosome:
- 22:44253595
(GRCh38)
22:44649476
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44253595:ATTT:ATTTATTT
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
ATTT=0.000008/1
(GnomAD)
- HGVS:
14.
rs1491269173 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TTCT
[Show Flanks]
- Chromosome:
- 22:44245859
(GRCh38)
22:44641740
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44245859:TCTTTCT:TCTTTCTTTCT
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCTTTCTTTCT=0./0
(
ALFA)
TCTT=0.000004/1
(TOPMED)
TCTT=0.000007/1
(GnomAD)
- HGVS:
15.
rs1491254793 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AC
[Show Flanks]
- Chromosome:
- 22:44327236
(GRCh38)
22:44723117
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44327236:C:CAC
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CAC=0./0
(
ALFA)
CA=0.000233/1
(Estonian)
CA=0.000255/27
(GnomAD)
- HGVS:
16.
rs1491243176 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GATG
[Show Flanks]
- Chromosome:
- 22:44266527
(GRCh38)
22:44662408
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44266527:ATG:ATGGATG
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
ATGGATG=0./0
(
ALFA)
ATGG=0.000035/4
(GnomAD)
- HGVS:
17.
rs1491212276 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TG>-
[Show Flanks]
- Chromosome:
- 22:44255619
(GRCh38)
22:44651499
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44255618:TG:
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00005/7
(GnomAD)
- HGVS:
18.
rs1491197188 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 22:44266528
(GRCh38)
22:44662408
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44266526:TAT:T
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000169/2
(
ALFA)
-=0.010672/1242
(GnomAD)
-=0.014366/92
(1000Genomes)
-=0.016031/262
(TOMMO)
-=0.020197/37
(Korea1K)
- HGVS:
19.
rs1491178490 has merged into rs58825139 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 22:44253427
(GRCh38)
22:44649307
(GRCh37)
- Canonical SPDI:
- NC_000022.11:44253425:TGT:T
- Gene:
- SHISAL1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.07343/871
(
ALFA)
-=0.01287/212
(TOMMO)
-=0.08888/8841
(GnomAD)
- HGVS: