SNP Links for Gene (Select 84649) - SNP

Links from Gene

Items: 1 to 20 of 7660

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Select item 14914431891.

rs1491443189 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:75778833 (GRCh38)
11:75489878 (GRCh37)
Canonical SPDI:: NC_000011.10:75778832:CA:
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.75778833_75778834del, NC_000011.9:g.75489878_75489879del, NG_046775.1:g.15101_15102del

Select item 14914055552.

rs1491405555 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 11:75787380 (GRCh38)
11:75498425 (GRCh37)
Canonical SPDI:: NC_000011.10:75787379:CA:
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000011.10:g.75787380_75787381del, NC_000011.9:g.75498425_75498426del, NG_046775.1:g.23648_23649del

Select item 14914016003.

rs1491401600 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 11:75797346 (GRCh38)
11:75508391 (GRCh37)
Canonical SPDI:: NC_000011.10:75797345:TA:
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.0002/2 (ALFA)
HGVS:: NC_000011.10:g.75797346_75797347del, NC_000011.9:g.75508391_75508392del, NG_046775.1:g.33614_33615del

Select item 14911323824.

rs1491132382 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 11:75787380 (GRCh38)
11:75498426 (GRCh37)
Canonical SPDI:: NC_000011.10:75787380:A:AA
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000023/6 (TOPMED)
HGVS:: NC_000011.10:g.75787381dup, NC_000011.9:g.75498426dup, NG_046775.1:g.23649dup

Select item 14908445105.

rs1490844510 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:75769948 (GRCh38)
11:75480993 (GRCh37)
Canonical SPDI:: NC_000011.10:75769947:T:G
Gene:: DGAT2 (Varview), DGAT2-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.75769948T>G, NC_000011.9:g.75480993T>G, NG_046775.1:g.6216T>G

Select item 14908270226.

rs1490827022 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75774820 (GRCh38)
11:75485865 (GRCh37)
Canonical SPDI:: NC_000011.10:75774819:A:G
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.75774820A>G, NC_000011.9:g.75485865A>G, NG_046775.1:g.11088A>G

Select item 14907056887.

rs1490705688 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75792561 (GRCh38)
11:75503606 (GRCh37)
Canonical SPDI:: NC_000011.10:75792560:C:T
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.75792561C>T, NC_000011.9:g.75503606C>T, NG_046775.1:g.28829C>T

Select item 14905868808.

rs1490586880 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75800363 (GRCh38)
11:75511408 (GRCh37)
Canonical SPDI:: NC_000011.10:75800362:C:T
Gene:: DGAT2 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75800363C>T, NC_000011.9:g.75511408C>T, NG_046775.1:g.36631C>T, NM_032564.5:c.1022C>T, NM_032564.4:c.1022C>T, NM_001253891.2:c.893C>T, NM_001253891.1:c.893C>T, XM_011545304.3:c.932C>T, XM_011545304.2:c.932C>T, XM_011545304.1:c.932C>T, XM_047427716.1:c.749C>T, NP_115953.2:p.Pro341Leu, NP_001240820.1:p.Pro298Leu, XP_011543606.1:p.Pro311Leu, XP_047283672.1:p.Pro250Leu

Select item 14905066369.

rs1490506636 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:75787087 (GRCh38)
11:75498132 (GRCh37)
Canonical SPDI:: NC_000011.10:75787086:C:G
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000011.10:g.75787087C>G, NC_000011.9:g.75498132C>G, NG_046775.1:g.23355C>G

Select item 149044025310.

rs1490440253 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:75784212 (GRCh38)
11:75495257 (GRCh37)
Canonical SPDI:: NC_000011.10:75784211:A:T
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.75784212A>T, NC_000011.9:g.75495257A>T, NG_046775.1:g.20480A>T

Select item 149041192311.

rs1490411923 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75801390 (GRCh38)
11:75512435 (GRCh37)
Canonical SPDI:: NC_000011.10:75801389:C:T
Gene:: DGAT2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000011.10:g.75801390C>T, NC_000011.9:g.75512435C>T, NG_046775.1:g.37658C>T, NM_032564.5:c.*882C>T, NM_032564.4:c.*882C>T, NM_001253891.2:c.*882C>T, NM_001253891.1:c.*882C>T, XM_011545304.3:c.*882C>T, XM_011545304.2:c.*882C>T, XM_011545304.1:c.*882C>T, XM_047427716.1:c.*882C>T

Select item 149033624912.

rs1490336249 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 11:75788275 (GRCh38)
11:75499320 (GRCh37)
Canonical SPDI:: NC_000011.10:75788274:G:A,NC_000011.10:75788274:G:C,NC_000011.10:75788274:G:T
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000015/4 (TOPMED)
C=0.000342/1 (KOREAN)
HGVS:: NC_000011.10:g.75788275G>A, NC_000011.10:g.75788275G>C, NC_000011.10:g.75788275G>T, NC_000011.9:g.75499320G>A, NC_000011.9:g.75499320G>C, NC_000011.9:g.75499320G>T, NG_046775.1:g.24543G>A, NG_046775.1:g.24543G>C, NG_046775.1:g.24543G>T

Select item 149024621713.

rs1490246217 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75767643 (GRCh38)
11:75478688 (GRCh37)
Canonical SPDI:: NC_000011.10:75767642:A:G
Gene:: DGAT2 (Varview), DGAT2-DT (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.75767643A>G, NC_000011.9:g.75478688A>G, NG_046775.1:g.3911A>G

Select item 149013564214.

rs1490135642 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75782114 (GRCh38)
11:75493159 (GRCh37)
Canonical SPDI:: NC_000011.10:75782113:C:T
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000106/2 (TOMMO)
HGVS:: NC_000011.10:g.75782114C>T, NC_000011.9:g.75493159C>T, NG_046775.1:g.18382C>T

Select item 149012275115.

rs1490122751 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:75799365 (GRCh38)
11:75510410 (GRCh37)
Canonical SPDI:: NC_000011.10:75799364:T:C
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.75799365T>C, NC_000011.9:g.75510410T>C, NG_046775.1:g.35633T>C

Select item 148991958316.

rs1489919583 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75791116 (GRCh38)
11:75502161 (GRCh37)
Canonical SPDI:: NC_000011.10:75791115:C:T
Gene:: DGAT2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000011.10:g.75791116C>T, NC_000011.9:g.75502161C>T, NG_046775.1:g.27384C>T

Select item 148991940217.

rs1489919402 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75769677 (GRCh38)
11:75480722 (GRCh37)
Canonical SPDI:: NC_000011.10:75769676:C:T
Gene:: DGAT2 (Varview), DGAT2-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.75769677C>T, NC_000011.9:g.75480722C>T, NG_046775.1:g.5945C>T

Select item 148986339918.

rs1489863399 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75772002 (GRCh38)
11:75483047 (GRCh37)
Canonical SPDI:: NC_000011.10:75772001:A:G
Gene:: DGAT2 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000021/3 (GnomAD)
G=0.000042/11 (TOPMED)
HGVS:: NC_000011.10:g.75772002A>G, NC_000011.9:g.75483047A>G, NG_046775.1:g.8270A>G

Select item 148971928719.

rs1489719287 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:75768148 (GRCh38)
11:75479193 (GRCh37)
Canonical SPDI:: NC_000011.10:75768147:G:A
Gene:: DGAT2 (Varview), DGAT2-DT (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.000035/1 (TOMMO)
A=0.000312/2 (1000Genomes)
HGVS:: NC_000011.10:g.75768148G>A, NC_000011.9:g.75479193G>A, NG_046775.1:g.4416G>A

Select item 148968267320.

rs1489682673 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75768823 (GRCh38)
11:75479868 (GRCh37)
Canonical SPDI:: NC_000011.10:75768822:C:T
Gene:: DGAT2 (Varview), DGAT2-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000071/1 (TOMMO)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000011.10:g.75768823C>T, NC_000011.9:g.75479868C>T, NG_046775.1:g.5091C>T, NM_032564.5:c.-169C>T, NM_032564.4:c.-169C>T, NM_001253891.2:c.-169C>T, NM_001253891.1:c.-169C>T

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