SNP Links for Gene (Select 84219) - SNP

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Select item 14902641411.

rs1490264141 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:690493 (GRCh38)
16:740493 (GRCh37)
Canonical SPDI:: NC_000016.10:690492:C:T
Gene:: WDR24 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.690493C>T, NC_000016.9:g.740493C>T

Select item 14898754972.

rs1489875497 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:684480 (GRCh38)
16:734480 (GRCh37)
Canonical SPDI:: NC_000016.10:684479:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant
HGVS:: NC_000016.10:g.684480G>A, NC_000016.9:g.734480G>A, NG_034141.1:g.9370G>A

Select item 14897782773.

rs1489778277 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:686531 (GRCh38)
16:736531 (GRCh37)
Canonical SPDI:: NC_000016.10:686530:C:A
Gene:: WDR24 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000016/2 (GnomAD)
HGVS:: NC_000016.10:g.686531C>A, NC_000016.9:g.736531C>A

Select item 14897178624.

rs1489717862 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:685357 (GRCh38)
16:735357 (GRCh37)
Canonical SPDI:: NC_000016.10:685356:A:G
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.685357A>G, NC_000016.9:g.735357A>G, NM_032259.4:c.1919T>C, NM_032259.3:c.1919T>C, NM_032259.2:c.1919T>C, NM_001303027.1:c.1919T>C, XM_047434767.1:c.1688T>C, NP_115635.1:p.Met640Thr, XP_047290723.1:p.Met563Thr

Select item 14897000925.

rs1489700092 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:684831 (GRCh38)
16:734831 (GRCh37)
Canonical SPDI:: NC_000016.10:684830:C:T
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
HGVS:: NC_000016.10:g.684831C>T, NC_000016.9:g.734831C>T, NM_032259.4:c.2276G>A, NM_032259.3:c.2276G>A, NM_032259.2:c.2276G>A, NM_001303027.1:c.2276G>A, XM_047434767.1:c.2045G>A, NP_115635.1:p.Gly759Asp, XP_047290723.1:p.Gly682Asp

Select item 14896769816.

rs1489676981 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 16:684550 (GRCh38)
16:734550 (GRCh37)
Canonical SPDI:: NC_000016.10:684549:CCCCC:CCCC
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: 2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CCCC=0.000071/1 (ALFA)
-=0.000019/5 (TOPMED)
HGVS:: NC_000016.10:g.684554del, NC_000016.9:g.734554del, NG_034141.1:g.9444del

Select item 14893130517.

rs1489313051 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:691392 (GRCh38)
16:741392 (GRCh37)
Canonical SPDI:: NC_000016.10:691391:C:T
Gene:: WDR24 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000023/6 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000016.10:g.691392C>T, NC_000016.9:g.741392C>T

Select item 14892512558.

rs1489251255 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:685063 (GRCh38)
16:735063 (GRCh37)
Canonical SPDI:: NC_000016.10:685062:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000016.10:g.685063G>A, NC_000016.9:g.735063G>A, NM_032259.4:c.2133C>T, NM_032259.3:c.2133C>T, NM_032259.2:c.2133C>T, NM_001303027.1:c.2133C>T, XM_047434767.1:c.1902C>T

Select item 14888768409.

rs1488876840 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:685280 (GRCh38)
16:735280 (GRCh37)
Canonical SPDI:: NC_000016.10:685279:T:G
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000111/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.685280T>G, NC_000016.9:g.735280T>G, NM_032259.4:c.1996A>C, NM_032259.3:c.1996A>C, NM_032259.2:c.1996A>C, NM_001303027.1:c.1996A>C, XM_047434767.1:c.1765A>C, NP_115635.1:p.Lys666Gln, XP_047290723.1:p.Lys589Gln

Select item 148870100310.

rs1488701003 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 16:684880 (GRCh38)
16:734880 (GRCh37)
Canonical SPDI:: NC_000016.10:684879:A:C
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.684880A>C, NC_000016.9:g.734880A>C, NM_032259.4:c.2227T>G, NM_032259.3:c.2227T>G, NM_032259.2:c.2227T>G, NM_001303027.1:c.2227T>G, XM_047434767.1:c.1996T>G, NP_115635.1:p.Cys743Gly, XP_047290723.1:p.Cys666Gly

Select item 148835358211.

rs1488353582 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:684146 (GRCh38)
16:734146 (GRCh37)
Canonical SPDI:: NC_000016.10:684145:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: 500B_downstream_variant,intron_variant,coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000012/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.684146G>A, NC_000016.9:g.734146G>A, NG_034141.1:g.9036G>A, NM_001005920.4:c.96C>T, NM_001005920.3:c.96C>T, NM_001005920.2:c.159C>T, NR_136651.3:n.111C>T, NR_136651.2:n.111C>T, NR_136651.1:n.223C>T, NR_136650.3:n.111C>T, NR_136650.2:n.111C>T, NR_136650.1:n.223C>T, NM_001323918.3:c.96C>T, NM_001323918.2:c.96C>T, NM_001323918.1:c.159C>T, NM_001323919.3:c.96C>T, NM_001323919.2:c.96C>T, NM_001323919.1:c.159C>T

Select item 148832594212.

rs1488325942 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:684827 (GRCh38)
16:734827 (GRCh37)
Canonical SPDI:: NC_000016.10:684826:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000018/3 (GnomAD_exomes)
HGVS:: NC_000016.10:g.684827G>A, NC_000016.9:g.734827G>A, NM_032259.4:c.2280C>T, NM_032259.3:c.2280C>T, NM_032259.2:c.2280C>T, NM_001303027.1:c.2280C>T, XM_047434767.1:c.2049C>T

Select item 148773757313.

rs1487737573 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:686088 (GRCh38)
16:736088 (GRCh37)
Canonical SPDI:: NC_000016.10:686087:A:G
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.686088A>G, NC_000016.9:g.736088A>G, NM_032259.4:c.1431T>C, NM_032259.3:c.1431T>C, NM_032259.2:c.1431T>C, NM_001303027.1:c.1431T>C, XM_047434767.1:c.1200T>C

Select item 148758624314.

rs1487586243 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 16:690990 (GRCh38)
16:740990 (GRCh37)
Canonical SPDI:: NC_000016.10:690989:T:A
Gene:: WDR24 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000016.10:g.690990T>A, NC_000016.9:g.740990T>A

Select item 148727087415.

rs1487270874 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:685015 (GRCh38)
16:735015 (GRCh37)
Canonical SPDI:: NC_000016.10:685014:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,synonymous_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.685015G>A, NC_000016.9:g.735015G>A, NM_032259.4:c.2181C>T, NM_032259.3:c.2181C>T, NM_032259.2:c.2181C>T, NM_001303027.1:c.2181C>T, XM_047434767.1:c.1950C>T

Select item 148679609316.

rs1486796093 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:690032 (GRCh38)
16:740032 (GRCh37)
Canonical SPDI:: NC_000016.10:690031:G:A
Gene:: WDR24 (Varview)
Functional Consequence:: upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.690032G>A, NC_000016.9:g.740032G>A, NM_032259.4:c.-392C>T, NM_032259.3:c.-392C>T, NM_032259.2:c.-392C>T, NM_001303027.1:c.-392C>T

Select item 148625624617.

rs1486256246 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:689446 (GRCh38)
16:739446 (GRCh37)
Canonical SPDI:: NC_000016.10:689445:C:T
Gene:: WDR24 (Varview)
Functional Consequence:: coding_sequence_variant,upstream_transcript_variant,genic_upstream_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.689446C>T, NC_000016.9:g.739446C>T, NM_032259.4:c.195G>A, NM_032259.3:c.195G>A, NM_032259.2:c.195G>A, NM_001303027.1:c.195G>A

Select item 148573271718.

rs1485732717 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 16:686747 (GRCh38)
16:736747 (GRCh37)
Canonical SPDI:: NC_000016.10:686746:G:A,NC_000016.10:686746:G:C
Gene:: WDR24 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000037/1 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.686747G>A, NC_000016.10:g.686747G>C, NC_000016.9:g.736747G>A, NC_000016.9:g.736747G>C, NM_032259.4:c.1329C>T, NM_032259.4:c.1329C>G, NM_032259.3:c.1329C>T, NM_032259.3:c.1329C>G, NM_032259.2:c.1329C>T, NM_032259.2:c.1329C>G, NM_001303027.1:c.1329C>T, NM_001303027.1:c.1329C>G, XM_047434767.1:c.1098C>T, XM_047434767.1:c.1098C>G, NP_115635.1:p.Asn443Lys, XP_047290723.1:p.Asn366Lys

Select item 148561852519.

rs1485618525 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:684200 (GRCh38)
16:734200 (GRCh37)
Canonical SPDI:: NC_000016.10:684199:G:A
Gene:: WDR24 (Varview), JMJD8 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.684200G>A, NC_000016.9:g.734200G>A, NG_034141.1:g.9090G>A

Select item 148529516620.

rs1485295166 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 16:688329 (GRCh38)
16:738329 (GRCh37)
Canonical SPDI:: NC_000016.10:688328:C:A,NC_000016.10:688328:C:G
Gene:: WDR24 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
A=0.000685/2 (KOREAN)
HGVS:: NC_000016.10:g.688329C>A, NC_000016.10:g.688329C>G, NC_000016.9:g.738329C>A, NC_000016.9:g.738329C>G, XM_047434767.1:c.-253G>T, XM_047434767.1:c.-253G>C