SNP Links for Gene (Select 83955) - SNP

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Select item 14914714051.

rs1491471405 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 8:101370061 (GRCh38)
8:102382289 (GRCh37)
Canonical SPDI:: NC_000008.11:101370060:CA:
Gene:: NACA4P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00017/2 (ALFA)
HGVS:: NC_000008.11:g.101370061_101370062del, NC_000008.10:g.102382289_102382290del, NM_032031.1:c.*511_*512del

Select item 14904764152.

rs1490476415 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:101369993 (GRCh38)
8:102382221 (GRCh37)
Canonical SPDI:: NC_000008.11:101369992:C:A,NC_000008.11:101369992:C:T
Gene:: NACA4P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000008.11:g.101369993C>A, NC_000008.11:g.101369993C>T, NC_000008.10:g.102382221C>A, NC_000008.10:g.102382221C>T, NM_032031.1:c.*443C>A, NM_032031.1:c.*443C>T

Select item 14898268973.

rs1489826897 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:101369441 (GRCh38)
8:102381669 (GRCh37)
Canonical SPDI:: NC_000008.11:101369440:A:C
Gene:: NACA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.101369441A>C, NC_000008.10:g.102381669A>C, NM_032031.1:c.533A>C, NR_002182.1:n.549A>C

Select item 14879331374.

rs1487933137 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:101369319 (GRCh38)
8:102381547 (GRCh37)
Canonical SPDI:: NC_000008.11:101369318:A:G
Gene:: NACA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD)
G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000008.11:g.101369319A>G, NC_000008.10:g.102381547A>G, NM_032031.1:c.411A>G, NR_002182.1:n.427A>G

Select item 14869105135.

rs1486910513 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 8:101368299 (GRCh38)
8:102380527 (GRCh37)
Canonical SPDI:: NC_000008.11:101368298:C:A
Gene:: NACA4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.101368299C>A, NC_000008.10:g.102380527C>A

Select item 14836406776.

rs1483640677 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:101369082 (GRCh38)
8:102381310 (GRCh37)
Canonical SPDI:: NC_000008.11:101369081:T:C
Gene:: NACA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.101369082T>C, NC_000008.10:g.102381310T>C, NM_032031.1:c.173T>C, NR_002182.1:n.190T>C

Select item 14826586607.

rs1482658660 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 8:101368726 (GRCh38)
8:102380954 (GRCh37)
Canonical SPDI:: NC_000008.11:101368725:C:G
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.101368726C>G, NC_000008.10:g.102380954C>G

Select item 14815171258.

rs1481517125 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:101369168 (GRCh38)
8:102381396 (GRCh37)
Canonical SPDI:: NC_000008.11:101369167:G:T
Gene:: NACA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.101369168G>T, NC_000008.10:g.102381396G>T, NM_032031.1:c.259G>T, NR_002182.1:n.276G>T

Select item 14812945969.

rs1481294596 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:101369874 (GRCh38)
8:102382102 (GRCh37)
Canonical SPDI:: NC_000008.11:101369873:C:A,NC_000008.11:101369873:C:T
Gene:: NACA4P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.101369874C>A, NC_000008.11:g.101369874C>T, NC_000008.10:g.102382102C>A, NC_000008.10:g.102382102C>T, NM_032031.1:c.*324C>A, NM_032031.1:c.*324C>T

Select item 148111588510.

rs1481115885 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:101366995 (GRCh38)
8:102379223 (GRCh37)
Canonical SPDI:: NC_000008.11:101366994:T:A
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.101366995T>A, NC_000008.10:g.102379223T>A, NG_004842.6:g.170A>T

Select item 148073958311.

rs1480739583 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:101369727 (GRCh38)
8:102381955 (GRCh37)
Canonical SPDI:: NC_000008.11:101369726:G:A
Gene:: NACA4P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.101369727G>A, NC_000008.10:g.102381955G>A, NM_032031.1:c.*177G>A

Select item 148028605612.

rs1480286056 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:101369951 (GRCh38)
8:102382179 (GRCh37)
Canonical SPDI:: NC_000008.11:101369950:A:G
Gene:: NACA4P (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.101369951A>G, NC_000008.10:g.102382179A>G, NM_032031.1:c.*401A>G

Select item 147711344913.

rs1477113449 [Homo sapiens]

Variant type:: SNV:
Alleles:: G>C
Chromosome:: no mapping
Canonical SPDI:

Select item 147706179314.

rs1477061793 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 8:101367068 (GRCh38)
8:102379296 (GRCh37)
Canonical SPDI:: NC_000008.11:101367067:T:G
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.101367068T>G, NC_000008.10:g.102379296T>G, NG_004842.6:g.97A>C

Select item 147637099515.

rs1476370995 has merged into rs902426728 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 8:101368346 (GRCh38)
8:102380574 (GRCh37)
Canonical SPDI:: NC_000008.11:101368345:TTTTTTT:TTTTTT,NC_000008.11:101368345:TTTTTTT:TTTTTTTT
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
-=0.000023/6 (TOPMED)
-=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.101368352del, NC_000008.11:g.101368352dup, NC_000008.10:g.102380580del, NC_000008.10:g.102380580dup

Select item 147634249716.

rs1476342497 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:101367200 (GRCh38)
8:102379428 (GRCh37)
Canonical SPDI:: NC_000008.11:101367199:A:G
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000008.11:g.101367200A>G, NC_000008.10:g.102379428A>G

Select item 147349942117.

rs1473499421 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 8:101367768 (GRCh38)
8:102379996 (GRCh37)
Canonical SPDI:: NC_000008.11:101367766:ACA:A
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.101367768_101367769del, NC_000008.10:g.102379996_102379997del

Select item 147307691018.

rs1473076910 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:101368291 (GRCh38)
8:102380519 (GRCh37)
Canonical SPDI:: NC_000008.11:101368290:G:A
Gene:: NACA4P (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000008.11:g.101368291G>A, NC_000008.10:g.102380519G>A

Select item 147212405519.

rs1472124055 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:101368821 (GRCh38)
8:102381049 (GRCh37)
Canonical SPDI:: NC_000008.11:101368820:G:A
Gene:: NACA4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000008.11:g.101368821G>A, NC_000008.10:g.102381049G>A, NM_032031.1:c.-29G>A

Select item 147191628820.

rs1471916288 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 8:101368717 (GRCh38)
8:102380945 (GRCh37)
Canonical SPDI:: NC_000008.11:101368716:T:A
Gene:: NACA4P (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.101368717T>A, NC_000008.10:g.102380945T>A

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