Links from Gene
Items: 1 to 20 of 11698
1.
rs1491490101 has merged into rs143130232 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 1:36346005
(GRCh38)
1:36811606
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36345991:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTT=0./0
(
ALFA)
TTTT=0.22367/6087
(TOMMO)
- HGVS:
NC_000001.11:g.36346005_36346009del, NC_000001.11:g.36346006_36346009del, NC_000001.11:g.36346007_36346009del, NC_000001.11:g.36346008_36346009del, NC_000001.11:g.36346009del, NC_000001.11:g.36346009dup, NC_000001.11:g.36346008_36346009dup, NC_000001.11:g.36346007_36346009dup, NC_000001.11:g.36346006_36346009dup, NC_000001.11:g.36346005_36346009dup, NC_000001.11:g.36346004_36346009dup, NC_000001.11:g.36346003_36346009dup, NC_000001.11:g.36346002_36346009dup, NC_000001.11:g.36346001_36346009dup, NC_000001.11:g.36346000_36346009dup, NC_000001.11:g.36345999_36346009dup, NC_000001.11:g.36345998_36346009dup, NC_000001.11:g.36345997_36346009dup, NC_000001.11:g.36345996_36346009dup, NC_000001.11:g.36345995_36346009dup, NC_000001.11:g.36345994_36346009dup, NC_000001.11:g.36345993_36346009dup, NC_000001.11:g.36345992_36346009dup, NC_000001.11:g.36346009_36346010insTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.36346009_36346010insTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.36346009_36346010insTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.36811606_36811610del, NC_000001.10:g.36811607_36811610del, NC_000001.10:g.36811608_36811610del, NC_000001.10:g.36811609_36811610del, NC_000001.10:g.36811610del, NC_000001.10:g.36811610dup, NC_000001.10:g.36811609_36811610dup, NC_000001.10:g.36811608_36811610dup, NC_000001.10:g.36811607_36811610dup, NC_000001.10:g.36811606_36811610dup, NC_000001.10:g.36811605_36811610dup, NC_000001.10:g.36811604_36811610dup, NC_000001.10:g.36811603_36811610dup, NC_000001.10:g.36811602_36811610dup, NC_000001.10:g.36811601_36811610dup, NC_000001.10:g.36811600_36811610dup, NC_000001.10:g.36811599_36811610dup, NC_000001.10:g.36811598_36811610dup, NC_000001.10:g.36811597_36811610dup, NC_000001.10:g.36811596_36811610dup, NC_000001.10:g.36811595_36811610dup, NC_000001.10:g.36811594_36811610dup, NC_000001.10:g.36811593_36811610dup, NC_000001.10:g.36811610_36811611insTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.36811610_36811611insTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.36811610_36811611insTTTTTTTTTTTTTTTTTTTTT
2.
rs1491442052 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 1:36379770
(GRCh38)
1:36845371
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36379769:GA:
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
5.
rs1491341637 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CTTT
[Show Flanks]
- Chromosome:
- 1:36356419
(GRCh38)
1:36822021
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36356419:TTT:TTTCTTT
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTCTTT=0./0
(
ALFA)
TTTC=0.000004/1
(TOPMED)
- HGVS:
6.
rs1491275988 has merged into rs1553135169 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATATATATAT>-,AT,ATAT,ATATAT,ATATATAT,ATATATATATAT,ATATATATATATAT,ATATATATATATATAT,ATATATATATATATATAT,ATATATATATATATATATAT,ATATATATATATATATATATAT,ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATAT
[Show Flanks]
- Chromosome:
- 1:36345983
(GRCh38)
1:36811584
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:36345968:ATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATAT
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATATATATATATATAT=0./0
(
ALFA)
AT=0.15/6
(GENOME_DK)
- HGVS:
NC_000001.11:g.36345969AT[7], NC_000001.11:g.36345969AT[8], NC_000001.11:g.36345969AT[9], NC_000001.11:g.36345969AT[10], NC_000001.11:g.36345969AT[11], NC_000001.11:g.36345969AT[13], NC_000001.11:g.36345969AT[14], NC_000001.11:g.36345969AT[15], NC_000001.11:g.36345969AT[16], NC_000001.11:g.36345969AT[17], NC_000001.11:g.36345969AT[18], NC_000001.11:g.36345969AT[19], NC_000001.11:g.36345969AT[20], NC_000001.11:g.36345969AT[21], NC_000001.11:g.36345969AT[22], NC_000001.11:g.36345969AT[23], NC_000001.11:g.36345969AT[25], NC_000001.10:g.36811570AT[7], NC_000001.10:g.36811570AT[8], NC_000001.10:g.36811570AT[9], NC_000001.10:g.36811570AT[10], NC_000001.10:g.36811570AT[11], NC_000001.10:g.36811570AT[13], NC_000001.10:g.36811570AT[14], NC_000001.10:g.36811570AT[15], NC_000001.10:g.36811570AT[16], NC_000001.10:g.36811570AT[17], NC_000001.10:g.36811570AT[18], NC_000001.10:g.36811570AT[19], NC_000001.10:g.36811570AT[20], NC_000001.10:g.36811570AT[21], NC_000001.10:g.36811570AT[22], NC_000001.10:g.36811570AT[23], NC_000001.10:g.36811570AT[25]
7.
rs1491108681 has merged into rs1002682531 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 1:36356430
(GRCh38)
1:36822031
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:36356418:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000001.11:g.36356430_36356441del, NC_000001.11:g.36356431_36356441del, NC_000001.11:g.36356432_36356441del, NC_000001.11:g.36356433_36356441del, NC_000001.11:g.36356434_36356441del, NC_000001.11:g.36356435_36356441del, NC_000001.11:g.36356436_36356441del, NC_000001.11:g.36356437_36356441del, NC_000001.11:g.36356438_36356441del, NC_000001.11:g.36356439_36356441del, NC_000001.11:g.36356440_36356441del, NC_000001.11:g.36356441del, NC_000001.11:g.36356441dup, NC_000001.11:g.36356440_36356441dup, NC_000001.11:g.36356439_36356441dup, NC_000001.11:g.36356438_36356441dup, NC_000001.11:g.36356437_36356441dup, NC_000001.11:g.36356436_36356441dup, NC_000001.11:g.36356435_36356441dup, NC_000001.11:g.36356434_36356441dup, NC_000001.11:g.36356433_36356441dup, NC_000001.11:g.36356432_36356441dup, NC_000001.11:g.36356431_36356441dup, NC_000001.11:g.36356430_36356441dup, NC_000001.11:g.36356429_36356441dup, NC_000001.11:g.36356428_36356441dup, NC_000001.11:g.36356427_36356441dup, NC_000001.11:g.36356426_36356441dup, NC_000001.11:g.36356425_36356441dup, NC_000001.11:g.36356423_36356441dup, NC_000001.10:g.36822031_36822042del, NC_000001.10:g.36822032_36822042del, NC_000001.10:g.36822033_36822042del, NC_000001.10:g.36822034_36822042del, NC_000001.10:g.36822035_36822042del, NC_000001.10:g.36822036_36822042del, NC_000001.10:g.36822037_36822042del, NC_000001.10:g.36822038_36822042del, NC_000001.10:g.36822039_36822042del, NC_000001.10:g.36822040_36822042del, NC_000001.10:g.36822041_36822042del, NC_000001.10:g.36822042del, NC_000001.10:g.36822042dup, NC_000001.10:g.36822041_36822042dup, NC_000001.10:g.36822040_36822042dup, NC_000001.10:g.36822039_36822042dup, NC_000001.10:g.36822038_36822042dup, NC_000001.10:g.36822037_36822042dup, NC_000001.10:g.36822036_36822042dup, NC_000001.10:g.36822035_36822042dup, NC_000001.10:g.36822034_36822042dup, NC_000001.10:g.36822033_36822042dup, NC_000001.10:g.36822032_36822042dup, NC_000001.10:g.36822031_36822042dup, NC_000001.10:g.36822030_36822042dup, NC_000001.10:g.36822029_36822042dup, NC_000001.10:g.36822028_36822042dup, NC_000001.10:g.36822027_36822042dup, NC_000001.10:g.36822026_36822042dup, NC_000001.10:g.36822024_36822042dup
8.
rs1491100505 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 1:36379770
(GRCh38)
1:36845372
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36379770:AAAAA:AAAAAA
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAA=0./0
(
ALFA)
A=0.000021/3
(GnomAD)
A=0.000038/10
(TOPMED)
- HGVS:
9.
rs1490998737 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 1:36355715
(GRCh38)
1:36821316
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36355714:G:
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
- HGVS:
10.
rs1490942973 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 1:36353605
(GRCh38)
1:36819206
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36353604:C:A,NC_000001.11:36353604:C:T
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.00089/4
(
ALFA)
T=0.00004/1
(TOMMO)
T=0.00089/4
(Estonian)
- HGVS:
11.
rs1490921541 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 1:36371724
(GRCh38)
1:36837325
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36371723:G:A
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000084/1
(
ALFA)
A=0./0
(KOREAN)
A=0.000022/3
(GnomAD)
- HGVS:
12.
rs1490855839 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 1:36372529
(GRCh38)
1:36838131
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36372529:AAA:AAAA
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AAAA=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
13.
rs1490817547 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:36387725
(GRCh38)
1:36853326
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36387724:A:G
- Gene:
- STK40 (Varview), LOC124904012 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
15.
rs1490708183 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 1:36364293
(GRCh38)
1:36829894
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36364292:A:G
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
16.
rs1490695010 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,T
[Show Flanks]
- Chromosome:
- 1:36369145
(GRCh38)
1:36834746
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36369144:C:A,NC_000001.11:36369144:C:T
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
17.
rs1490690877 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 1:36350859
(GRCh38)
1:36816460
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36350858:A:C,NC_000001.11:36350858:A:G
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
18.
rs1490639711 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 1:36372087
(GRCh38)
1:36837688
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36372086:G:A,NC_000001.11:36372086:G:C
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
C=0.000071/2
(TOMMO)
- HGVS:
19.
rs1490562424 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 1:36349541
(GRCh38)
1:36815142
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36349540:C:T
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
T=0.000007/1
(GnomAD)
- HGVS:
20.
rs1490380313 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 1:36342848
(GRCh38)
1:36808449
(GRCh37)
- Canonical SPDI:
- NC_000001.11:36342847:A:T
- Gene:
- STK40 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS: