SNP Links for Gene (Select 83714) - SNP

Links from Gene

Items: 1 to 20 of 3357

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Select item 14906861611.

rs1490686161 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:2837183 (GRCh38)
12:2946349 (GRCh37)
Canonical SPDI:: NC_000012.12:2837182:A:G
Gene:: ITFG2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000012.12:g.2837183A>G, NC_000012.11:g.2946349A>G

Select item 14901968262.

rs1490196826 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:2828784 (GRCh38)
12:2937950 (GRCh37)
Canonical SPDI:: NC_000012.12:2828783:G:A
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2828784G>A, NC_000012.11:g.2937950G>A

Select item 14895511033.

rs1489551103 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:2834602 (GRCh38)
12:2943768 (GRCh37)
Canonical SPDI:: NC_000012.12:2834601:A:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.2834602A>G, NC_000012.11:g.2943768A>G

Select item 14894091134.

rs1489409113 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:2830261 (GRCh38)
12:2939427 (GRCh37)
Canonical SPDI:: NC_000012.12:2830260:T:C
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000036/5 (GnomAD)
C=0.000106/28 (TOPMED)
HGVS:: NC_000012.12:g.2830261T>C, NC_000012.11:g.2939427T>C, NR_130744.3:n.1617T>C, NR_130744.2:n.1663T>C, NR_130744.1:n.1663T>C

Select item 14893739185.

rs1489373918 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:2831132 (GRCh38)
12:2940298 (GRCh37)
Canonical SPDI:: NC_000012.12:2831131:C:T
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000012.12:g.2831132C>T, NC_000012.11:g.2940298C>T

Select item 14891441186.

rs1489144118 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 12:2826087 (GRCh38)
12:2935253 (GRCh37)
Canonical SPDI:: NC_000012.12:2826086:A:T
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2826087A>T, NC_000012.11:g.2935253A>T, NM_031474.3:c.*1120T>A, NM_031474.2:c.*1120T>A

Select item 14889563307.

rs1488956330 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:2836981 (GRCh38)
12:2946147 (GRCh37)
Canonical SPDI:: NC_000012.12:2836980:T:C
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.2836981T>C, NC_000012.11:g.2946147T>C

Select item 14888493618.

rs1488849361 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:2828091 (GRCh38)
12:2937257 (GRCh37)
Canonical SPDI:: NC_000012.12:2828090:G:A
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000023/6 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000012.12:g.2828091G>A, NC_000012.11:g.2937257G>A

Select item 14877338599.

rs1487733859 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:2834244 (GRCh38)
12:2943410 (GRCh37)
Canonical SPDI:: NC_000012.12:2834243:T:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000546/1 (Korea1K)
HGVS:: NC_000012.12:g.2834244T>G, NC_000012.11:g.2943410T>G

Select item 148761419110.

rs1487614191 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:2835988 (GRCh38)
12:2945154 (GRCh37)
Canonical SPDI:: NC_000012.12:2835987:A:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2835988A>G, NC_000012.11:g.2945154A>G

Select item 148750466311.

rs1487504663 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:2826227 (GRCh38)
12:2935393 (GRCh37)
Canonical SPDI:: NC_000012.12:2826226:T:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2826227T>G, NC_000012.11:g.2935393T>G, NM_031474.3:c.*980A>C, NM_031474.2:c.*980A>C

Select item 148742710112.

rs1487427101 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:2830338 (GRCh38)
12:2939504 (GRCh37)
Canonical SPDI:: NC_000012.12:2830337:T:C
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000023/6 (TOPMED)
C=0.000684/2 (KOREAN)
HGVS:: NC_000012.12:g.2830338T>C, NC_000012.11:g.2939504T>C, NR_130744.3:n.1694T>C, NR_130744.2:n.1740T>C, NR_130744.1:n.1740T>C

Select item 148732508413.

rs1487325084 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 12:2829660 (GRCh38)
12:2938826 (GRCh37)
Canonical SPDI:: NC_000012.12:2829659:A:G,NC_000012.12:2829659:A:T
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.2829660A>G, NC_000012.12:g.2829660A>T, NC_000012.11:g.2938826A>G, NC_000012.11:g.2938826A>T

Select item 148724049414.

rs1487240494 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:2835609 (GRCh38)
12:2944775 (GRCh37)
Canonical SPDI:: NC_000012.12:2835608:C:T
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2835609C>T, NC_000012.11:g.2944775C>T

Select item 148702632115.

rs1487026321 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:2836601 (GRCh38)
12:2945767 (GRCh37)
Canonical SPDI:: NC_000012.12:2836600:T:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.2836601T>G, NC_000012.11:g.2945767T>G

Select item 148685240616.

rs1486852406 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:2824990 (GRCh38)
12:2934156 (GRCh37)
Canonical SPDI:: NC_000012.12:2824989:A:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,3_prime_UTR_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.2824990A>G, NC_000012.11:g.2934156A>G, NM_018463.4:c.*797A>G, NM_018463.3:c.*797A>G

Select item 148678093517.

rs1486780935 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:2830430 (GRCh38)
12:2939596 (GRCh37)
Canonical SPDI:: NC_000012.12:2830429:T:C
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.2830430T>C, NC_000012.11:g.2939596T>C, NR_130744.3:n.1786T>C, NR_130744.2:n.1832T>C, NR_130744.1:n.1832T>C

Select item 148654709018.

rs1486547090 [Homo sapiens]

Variant type:: DELINS
Alleles:: AACCCCATCTCTA>- [Show Flanks]
Chromosome:: 12:2829901 (GRCh38)
12:2939067 (GRCh37)
Canonical SPDI:: NC_000012.12:2829899:AAACCCCATCTCTA:A
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: -=0.000036/5 (GnomAD)
HGVS:: NC_000012.12:g.2829901_2829913del, NC_000012.11:g.2939067_2939079del

Select item 148643096019.

rs1486430960 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 12:2831638 (GRCh38)
12:2940804 (GRCh37)
Canonical SPDI:: NC_000012.12:2831637:C:G
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.2831638C>G, NC_000012.11:g.2940804C>G

Select item 148634791620.

rs1486347916 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:2834900 (GRCh38)
12:2944066 (GRCh37)
Canonical SPDI:: NC_000012.12:2834899:T:C
Gene:: ITFG2 (Varview), NRIP2 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: C=0.0001/1 (ALFA)
HGVS:: NC_000012.12:g.2834900T>C, NC_000012.11:g.2944066T>C, NM_031474.3:c.84A>G, NM_031474.2:c.84A>G

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