SNP Links for Gene (Select 8350) - SNP

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Select item 14903149691.

rs1490314969 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:26019838 (GRCh38)
6:26020066 (GRCh37)
Canonical SPDI:: NC_000006.12:26019837:A:T
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.26019838A>T, NC_000006.11:g.26020066A>T

Select item 14895553682.

rs1489555368 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:26020892 (GRCh38)
6:26021120 (GRCh37)
Canonical SPDI:: NC_000006.12:26020891:A:G
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.26020892A>G, NC_000006.11:g.26021120A>G, NM_003529.3:c.403A>G, NM_003529.2:c.403A>G, NP_003520.1:p.Arg135Gly

Select item 14879373203.

rs1487937320 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:26018513 (GRCh38)
6:26018741 (GRCh37)
Canonical SPDI:: NC_000006.12:26018512:G:T
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.26018513G>T, NC_000006.11:g.26018741G>T

Select item 14870928564.

rs1487092856 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:26018975 (GRCh38)
6:26019203 (GRCh37)
Canonical SPDI:: NC_000006.12:26018974:C:T
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.26018975C>T, NC_000006.11:g.26019203C>T

Select item 14852363415.

rs1485236341 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 6:26021268 (GRCh38)
6:26021496 (GRCh37)
Canonical SPDI:: NC_000006.12:26021267:G:A,NC_000006.12:26021267:G:C
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.26021268G>A, NC_000006.12:g.26021268G>C, NC_000006.11:g.26021496G>A, NC_000006.11:g.26021496G>C

Select item 14851229016.

rs1485122901 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:26019969 (GRCh38)
6:26020197 (GRCh37)
Canonical SPDI:: NC_000006.12:26019968:G:A
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.26019969G>A, NC_000006.11:g.26020197G>A

Select item 14813461867.

rs1481346186 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:26021348 (GRCh38)
6:26021576 (GRCh37)
Canonical SPDI:: NC_000006.12:26021347:G:A
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00011/29 (TOPMED)
A=0.000128/18 (GnomAD)
HGVS:: NC_000006.12:g.26021348G>A, NC_000006.11:g.26021576G>A

Select item 14807883708.

rs1480788370 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:26018569 (GRCh38)
6:26018797 (GRCh37)
Canonical SPDI:: NC_000006.12:26018568:A:G
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.26018569A>G, NC_000006.11:g.26018797A>G

Select item 14807406879.

rs1480740687 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:26018752 (GRCh38)
6:26018980 (GRCh37)
Canonical SPDI:: NC_000006.12:26018751:C:T
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.26018752C>T, NC_000006.11:g.26018980C>T

Select item 148040562110.

rs1480405621 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:26019954 (GRCh38)
6:26020182 (GRCh37)
Canonical SPDI:: NC_000006.12:26019953:G:T
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.26019954G>T, NC_000006.11:g.26020182G>T

Select item 147989465311.

rs1479894653 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 6:26018933 (GRCh38)
6:26019161 (GRCh37)
Canonical SPDI:: NC_000006.12:26018932:G:C
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000045/12 (TOPMED)
HGVS:: NC_000006.12:g.26018933G>C, NC_000006.11:g.26019161G>C

Select item 147915592412.

rs1479155924 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTTT>- [Show Flanks]
Chromosome:: 6:26019978 (GRCh38)
6:26020206 (GRCh37)
Canonical SPDI:: NC_000006.12:26019976:TCTTT:T
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000084/1 (ALFA)
-=0.000016/2 (GnomAD)
HGVS:: NC_000006.12:g.26019978_26019981del, NC_000006.11:g.26020206_26020209del

Select item 147828545813.

rs1478285458 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 6:26020324 (GRCh38)
6:26020552 (GRCh37)
Canonical SPDI:: NC_000006.12:26020323:G:A,NC_000006.12:26020323:G:T
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.26020324G>A, NC_000006.12:g.26020324G>T, NC_000006.11:g.26020552G>A, NC_000006.11:g.26020552G>T

Select item 147828537114.

rs1478285371 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 6:26020864 (GRCh38)
6:26021092 (GRCh37)
Canonical SPDI:: NC_000006.12:26020863:CC:C
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,frameshift_variant,coding_sequence_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000006.12:g.26020865del, NC_000006.11:g.26021093del, NM_003529.3:c.376del, NM_003529.2:c.376del, NP_003520.1:p.Gln126fs

Select item 147715091815.

rs1477150918 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:26019420 (GRCh38)
6:26019648 (GRCh37)
Canonical SPDI:: NC_000006.12:26019419:A:C
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.26019420A>C, NC_000006.11:g.26019648A>C

Select item 147658852216.

rs1476588522 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 6:26019056 (GRCh38)
6:26019284 (GRCh37)
Canonical SPDI:: NC_000006.12:26019055:G:C
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.26019056G>C, NC_000006.11:g.26019284G>C

Select item 147502883617.

rs1475028836 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:26019544 (GRCh38)
6:26019772 (GRCh37)
Canonical SPDI:: NC_000006.12:26019543:T:G
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.26019544T>G, NC_000006.11:g.26019772T>G

Select item 147480190518.

rs1474801905 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:26021332 (GRCh38)
6:26021560 (GRCh37)
Canonical SPDI:: NC_000006.12:26021331:T:C
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.26021332T>C, NC_000006.11:g.26021560T>C

Select item 147230919919.

rs1472309199 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 6:26020509 (GRCh38)
6:26020737 (GRCh37)
Canonical SPDI:: NC_000006.12:26020508:C:G
Gene:: H3C1 (Varview), H4C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0.00007/1 (ALFA)
HGVS:: NC_000006.12:g.26020509C>G, NC_000006.11:g.26020737C>G, NM_003529.3:c.20C>G, NM_003529.2:c.20C>G, NP_003520.1:p.Thr7Ser

Select item 146982464520.

rs1469824645 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:26019296 (GRCh38)
6:26019524 (GRCh37)
Canonical SPDI:: NC_000006.12:26019295:A:C
Gene:: H1-1 (Varview), H3C1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.26019296A>C, NC_000006.11:g.26019524A>C

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