SNP Links for Gene (Select 81551) - SNP

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Items: 1 to 20 of 5893

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Select item 14913850441.

rs1491385044 [Homo sapiens]

Variant type:: DEL
Alleles:: GT>- [Show Flanks]
Chromosome:: 8:27251286 (GRCh38)
8:27108803 (GRCh37)
Canonical SPDI:: NC_000008.11:27251285:GT:
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00002/2 (GnomAD)
-=0.000035/1 (TOMMO)
HGVS:: NC_000008.11:g.27251286_27251287del, NC_000008.10:g.27108803_27108804del

Select item 14912159012.

rs1491215901 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 8:27259483 (GRCh38)
8:27117001 (GRCh37)
Canonical SPDI:: NC_000008.11:27259483:T:TT
Gene:: STMN4 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.27259484dup, NC_000008.10:g.27117001dup

Select item 14910597713.

rs1491059771 has merged into rs150260843 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAA>-,AA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 8:27247264 (GRCh38)
8:27104781 (GRCh37)
Canonical SPDI:: NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000008.11:27247254:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000008.11:g.27247264_27247273del, NC_000008.11:g.27247266_27247273del, NC_000008.11:g.27247268_27247273del, NC_000008.11:g.27247269_27247273del, NC_000008.11:g.27247270_27247273del, NC_000008.11:g.27247271_27247273del, NC_000008.11:g.27247272_27247273del, NC_000008.11:g.27247273del, NC_000008.11:g.27247273dup, NC_000008.11:g.27247272_27247273dup, NC_000008.11:g.27247271_27247273dup, NC_000008.11:g.27247270_27247273dup, NC_000008.11:g.27247269_27247273dup, NC_000008.11:g.27247268_27247273dup, NC_000008.10:g.27104781_27104790del, NC_000008.10:g.27104783_27104790del, NC_000008.10:g.27104785_27104790del, NC_000008.10:g.27104786_27104790del, NC_000008.10:g.27104787_27104790del, NC_000008.10:g.27104788_27104790del, NC_000008.10:g.27104789_27104790del, NC_000008.10:g.27104790del, NC_000008.10:g.27104790dup, NC_000008.10:g.27104789_27104790dup, NC_000008.10:g.27104788_27104790dup, NC_000008.10:g.27104787_27104790dup, NC_000008.10:g.27104786_27104790dup, NC_000008.10:g.27104785_27104790dup

Select item 14909693174.

rs1490969317 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:27248276 (GRCh38)
8:27105793 (GRCh37)
Canonical SPDI:: NC_000008.11:27248275:T:C
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.27248276T>C, NC_000008.10:g.27105793T>C

Select item 14907505905.

rs1490750590 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27240321 (GRCh38)
8:27097838 (GRCh37)
Canonical SPDI:: NC_000008.11:27240320:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.27240321C>T, NC_000008.10:g.27097838C>T

Select item 14907368856.

rs1490736885 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27238330 (GRCh38)
8:27095847 (GRCh37)
Canonical SPDI:: NC_000008.11:27238329:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.27238330C>T, NC_000008.10:g.27095847C>T

Select item 14906054627.

rs1490605462 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27255860 (GRCh38)
8:27113377 (GRCh37)
Canonical SPDI:: NC_000008.11:27255859:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.27255860C>T, NC_000008.10:g.27113377C>T

Select item 14906015808.

rs1490601580 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:27235331 (GRCh38)
8:27092848 (GRCh37)
Canonical SPDI:: NC_000008.11:27235330:T:C
Gene:: STMN4 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.27235331T>C, NC_000008.10:g.27092848T>C, NM_030795.4:c.*1515A>G, NM_030795.3:c.*1515A>G, NM_001283053.2:c.*1608A>G, NM_001283053.1:c.*1608A>G, NM_001283054.2:c.*1515A>G, NM_001283054.1:c.*1515A>G, NM_001283055.2:c.*1608A>G, NM_001283055.1:c.*1608A>G, NM_001394387.1:c.*1608A>G, NM_001394385.1:c.*1608A>G, NM_001394388.1:c.*1608A>G, NM_001394383.1:c.*1515A>G, NM_001394384.1:c.*1515A>G, NM_001394386.1:c.*1515A>G

Select item 14905874879.

rs1490587487 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 8:27240802 (GRCh38)
8:27098320 (GRCh37)
Canonical SPDI:: NC_000008.11:27240802:T:TT
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.27240803dup, NC_000008.10:g.27098320dup

Select item 149036206310.

rs1490362063 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27249327 (GRCh38)
8:27106844 (GRCh37)
Canonical SPDI:: NC_000008.11:27249326:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.27249327C>T, NC_000008.10:g.27106844C>T

Select item 149030171411.

rs1490301714 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 8:27237129 (GRCh38)
8:27094646 (GRCh37)
Canonical SPDI:: NC_000008.11:27237128:G:A,NC_000008.11:27237128:G:T
Gene:: STMN4 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.27237129G>A, NC_000008.11:g.27237129G>T, NC_000008.10:g.27094646G>A, NC_000008.10:g.27094646G>T

Select item 148999247612.

rs1489992476 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:27249206 (GRCh38)
8:27106723 (GRCh37)
Canonical SPDI:: NC_000008.11:27249205:C:A,NC_000008.11:27249205:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00007/1 (TOMMO)
HGVS:: NC_000008.11:g.27249206C>A, NC_000008.11:g.27249206C>T, NC_000008.10:g.27106723C>A, NC_000008.10:g.27106723C>T

Select item 148977745813.

rs1489777458 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:27256339 (GRCh38)
8:27113856 (GRCh37)
Canonical SPDI:: NC_000008.11:27256338:G:A
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000008.11:g.27256339G>A, NC_000008.10:g.27113856G>A

Select item 148969328314.

rs1489693283 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27246424 (GRCh38)
8:27103941 (GRCh37)
Canonical SPDI:: NC_000008.11:27246423:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.27246424C>T, NC_000008.10:g.27103941C>T

Select item 148959513015.

rs1489595130 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:27257723 (GRCh38)
8:27115240 (GRCh37)
Canonical SPDI:: NC_000008.11:27257722:G:A
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.27257723G>A, NC_000008.10:g.27115240G>A

Select item 148957395416.

rs1489573954 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:27236849 (GRCh38)
8:27094366 (GRCh37)
Canonical SPDI:: NC_000008.11:27236848:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,coding_sequence_variant,synonymous_variant,3_prime_UTR_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000008.11:g.27236849C>T, NC_000008.10:g.27094366C>T, NM_030795.4:c.648G>A, NM_030795.3:c.648G>A, NM_030795.2:c.648G>A, NM_001283053.2:c.*90G>A, NM_001283053.1:c.*90G>A, NM_001283054.2:c.567G>A, NM_001283054.1:c.567G>A, NM_001283055.2:c.*90G>A, NM_001283055.1:c.*90G>A, NM_001394387.1:c.*90G>A, NM_001394385.1:c.*90G>A, NM_001394388.1:c.*90G>A, NM_001394383.1:c.564G>A, NM_001394384.1:c.540G>A, NM_001394386.1:c.471G>A

Select item 148954385417.

rs1489543854 has merged into rs59516183 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACACACACACACACACACACACACA>-,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA [Show Flanks]
Chromosome:: 8:27257473 (GRCh38)
8:27114990 (GRCh37)
Canonical SPDI:: NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000008.11:27257459:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACA=0./0 (ALFA)
ACACACACACAC=0.5/20 (GENOME_DK)
HGVS:: NC_000008.11:g.27257461CA[6], NC_000008.11:g.27257461CA[8], NC_000008.11:g.27257461CA[9], NC_000008.11:g.27257461CA[10], NC_000008.11:g.27257461CA[11], NC_000008.11:g.27257461CA[12], NC_000008.11:g.27257461CA[13], NC_000008.11:g.27257461CA[14], NC_000008.11:g.27257461CA[15], NC_000008.11:g.27257461CA[16], NC_000008.11:g.27257461CA[17], NC_000008.11:g.27257461CA[18], NC_000008.11:g.27257461CA[19], NC_000008.11:g.27257461CA[20], NC_000008.11:g.27257461CA[22], NC_000008.11:g.27257461CA[23], NC_000008.11:g.27257461CA[24], NC_000008.11:g.27257461CA[25], NC_000008.11:g.27257461CA[26], NC_000008.11:g.27257461CA[27], NC_000008.11:g.27257461CA[28], NC_000008.11:g.27257461CA[29], NC_000008.10:g.27114978CA[6], NC_000008.10:g.27114978CA[8], NC_000008.10:g.27114978CA[9], NC_000008.10:g.27114978CA[10], NC_000008.10:g.27114978CA[11], NC_000008.10:g.27114978CA[12], NC_000008.10:g.27114978CA[13], NC_000008.10:g.27114978CA[14], NC_000008.10:g.27114978CA[15], NC_000008.10:g.27114978CA[16], NC_000008.10:g.27114978CA[17], NC_000008.10:g.27114978CA[18], NC_000008.10:g.27114978CA[19], NC_000008.10:g.27114978CA[20], NC_000008.10:g.27114978CA[22], NC_000008.10:g.27114978CA[23], NC_000008.10:g.27114978CA[24], NC_000008.10:g.27114978CA[25], NC_000008.10:g.27114978CA[26], NC_000008.10:g.27114978CA[27], NC_000008.10:g.27114978CA[28], NC_000008.10:g.27114978CA[29]

Select item 148940324318.

rs1489403243 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>- [Show Flanks]
Chromosome:: 8:27243408 (GRCh38)
8:27100925 (GRCh37)
Canonical SPDI:: NC_000008.11:27243405:AAAAA:AA
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.27243408_27243410del, NC_000008.10:g.27100925_27100927del

Select item 148934034919.

rs1489340349 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:27247035 (GRCh38)
8:27104552 (GRCh37)
Canonical SPDI:: NC_000008.11:27247034:C:G,NC_000008.11:27247034:C:T
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.27247035C>G, NC_000008.11:g.27247035C>T, NC_000008.10:g.27104552C>G, NC_000008.10:g.27104552C>T

Select item 148928030620.

rs1489280306 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 8:27254073 (GRCh38)
8:27111590 (GRCh37)
Canonical SPDI:: NC_000008.11:27254072:G:A,NC_000008.11:27254072:G:C
Gene:: STMN4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.003333/2 (NorthernSweden)
HGVS:: NC_000008.11:g.27254073G>A, NC_000008.11:g.27254073G>C, NC_000008.10:g.27111590G>A, NC_000008.10:g.27111590G>C

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