SNP Links for Gene (Select 79025) - SNP

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Links from Gene

Items: 1 to 20 of 1766

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Select item 14908315361.

rs1490831536 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 20:63552112 (GRCh38)
20:62183465 (GRCh37)
Canonical SPDI:: NC_000020.11:63552111:T:G
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
HGVS:: NC_000020.11:g.63552112T>G, NC_000020.10:g.62183465T>G

Select item 14895258432.

rs1489525843 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:63551429 (GRCh38)
20:62182782 (GRCh37)
Canonical SPDI:: NC_000020.11:63551428:A:G
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63551429A>G, NC_000020.10:g.62182782A>G

Select item 14895177013.

rs1489517701 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63553772 (GRCh38)
20:62185125 (GRCh37)
Canonical SPDI:: NC_000020.11:63553771:C:T
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.63553772C>T, NC_000020.10:g.62185125C>T, XM_047440466.1:c.79C>T, XP_047296422.1:p.Pro27Ser

Select item 14883079544.

rs1488307954 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:63554648 (GRCh38)
20:62186001 (GRCh37)
Canonical SPDI:: NC_000020.11:63554647:A:G
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63554648A>G, NC_000020.10:g.62186001A>G, XM_011529041.3:c.-531A>G, XM_011529041.2:c.-531A>G, XM_011529041.1:c.-531A>G

Select item 14876550495.

rs1487655049 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63553817 (GRCh38)
20:62185170 (GRCh37)
Canonical SPDI:: NC_000020.11:63553816:G:A
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,missense_variant,coding_sequence_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.63553817G>A, NC_000020.10:g.62185170G>A, XM_047440466.1:c.124G>A, XP_047296422.1:p.Asp42Asn

Select item 14875710246.

rs1487571024 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:63555985 (GRCh38)
20:62187338 (GRCh37)
Canonical SPDI:: NC_000020.11:63555984:T:C
Gene:: FNDC11 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63555985T>C, NC_000020.10:g.62187338T>C, XM_011529041.3:c.322T>C, XM_011529041.2:c.322T>C, XM_011529041.1:c.322T>C, NM_024059.3:c.322T>C, NM_024059.2:c.322T>C, XM_017028060.2:c.337T>C, XM_017028060.1:c.337T>C, NM_001319153.2:c.322T>C, NM_001319153.1:c.322T>C, NM_001319152.2:c.322T>C, NM_001319152.1:c.322T>C, XM_047440467.1:c.391T>C, XM_047440468.1:c.322T>C, XM_047440466.1:c.544T>C, XP_011527343.1:p.Phe108Leu, NP_076964.1:p.Phe108Leu, XP_016883549.1:p.Phe113Leu, NP_001306082.1:p.Phe108Leu, NP_001306081.1:p.Phe108Leu, XP_047296423.1:p.Phe131Leu, XP_047296424.1:p.Phe108Leu, XP_047296422.1:p.Phe182Leu

Select item 14873368287.

rs1487336828 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:63554863 (GRCh38)
20:62186216 (GRCh37)
Canonical SPDI:: NC_000020.11:63554862:G:A,NC_000020.11:63554862:G:C
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000071/1 (TOMMO)
HGVS:: NC_000020.11:g.63554863G>A, NC_000020.11:g.63554863G>C, NC_000020.10:g.62186216G>A, NC_000020.10:g.62186216G>C, XM_011529041.3:c.-316G>A, XM_011529041.3:c.-316G>C, XM_011529041.2:c.-316G>A, XM_011529041.2:c.-316G>C, XM_011529041.1:c.-316G>A, XM_011529041.1:c.-316G>C

Select item 14872970348.

rs1487297034 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGGAGCCTGCGGTGGG>-,GGGAGCCTGCGGTGGGGGGAGCCTGCGGTGGG [Show Flanks]
Chromosome:: 20:63553651 (GRCh38)
20:62185004 (GRCh37)
Canonical SPDI:: NC_000020.11:63553635:GGAGCCTGCGGTGGGGGGAGCCTGCGGTGGG:GGAGCCTGCGGTGGG,NC_000020.11:63553635:GGAGCCTGCGGTGGGGGGAGCCTGCGGTGGG:GGAGCCTGCGGTGGGGGGAGCCTGCGGTGGGGGGAGCCTGCGGTGGG
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGAGCCTGCGGTGGGGGGAGCCTGCGGTGGGGGGAGCCTGCGGTGGG=0./0 (ALFA)
-=0.00017/9 (GnomAD)
HGVS:: NC_000020.11:g.63553651_63553666del, NC_000020.11:g.63553651_63553666dup, NC_000020.10:g.62185004_62185019del, NC_000020.10:g.62185004_62185019dup, NG_060756.1:g.396_411del, NG_060756.1:g.396_411dup

Select item 14870506749.

rs1487050674 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63552799 (GRCh38)
20:62184152 (GRCh37)
Canonical SPDI:: NC_000020.11:63552798:G:A
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63552799G>A, NC_000020.10:g.62184152G>A

Select item 148611904410.

rs1486119044 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:63552982 (GRCh38)
20:62184335 (GRCh37)
Canonical SPDI:: NC_000020.11:63552981:A:G
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.63552982A>G, NC_000020.10:g.62184335A>G

Select item 148603626911.

rs1486036269 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:63553337 (GRCh38)
20:62184690 (GRCh37)
Canonical SPDI:: NC_000020.11:63553336:C:A
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000020.11:g.63553337C>A, NC_000020.10:g.62184690C>A, NG_060756.1:g.82C>A

Select item 148546411112.

rs1485464111 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:63552108 (GRCh38)
20:62183461 (GRCh37)
Canonical SPDI:: NC_000020.11:63552107:T:C
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63552108T>C, NC_000020.10:g.62183461T>C

Select item 148538261513.

rs1485382615 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:63552535 (GRCh38)
20:62183888 (GRCh37)
Canonical SPDI:: NC_000020.11:63552534:C:G
Gene:: FNDC11 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63552535C>G, NC_000020.10:g.62183888C>G

Select item 148533114214.

rs1485331142 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:63553384 (GRCh38)
20:62184737 (GRCh37)
Canonical SPDI:: NC_000020.11:63553383:C:A,NC_000020.11:63553383:C:T
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000020.11:g.63553384C>A, NC_000020.11:g.63553384C>T, NC_000020.10:g.62184737C>A, NC_000020.10:g.62184737C>T, NG_060756.1:g.129C>A, NG_060756.1:g.129C>T

Select item 148533066315.

rs1485330663 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:63555343 (GRCh38)
20:62186696 (GRCh37)
Canonical SPDI:: NC_000020.11:63555342:G:A,NC_000020.11:63555342:G:T
Gene:: FNDC11 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000020.11:g.63555343G>A, NC_000020.11:g.63555343G>T, NC_000020.10:g.62186696G>A, NC_000020.10:g.62186696G>T, XM_017028060.2:c.-219G>A, XM_017028060.2:c.-219G>T

Select item 148512874916.

rs1485128749 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:63555621 (GRCh38)
20:62186974 (GRCh37)
Canonical SPDI:: NC_000020.11:63555620:T:C
Gene:: FNDC11 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
T=0.5/3 (SGDP_PRJ)
HGVS:: NC_000020.11:g.63555621T>C, NC_000020.10:g.62186974T>C, XM_047440467.1:c.27T>C

Select item 148443138117.

rs1484431381 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:63553421 (GRCh38)
20:62184774 (GRCh37)
Canonical SPDI:: NC_000020.11:63553420:G:A,NC_000020.11:63553420:G:C
Gene:: FNDC11 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63553421G>A, NC_000020.11:g.63553421G>C, NC_000020.10:g.62184774G>A, NC_000020.10:g.62184774G>C, NG_060756.1:g.166G>A, NG_060756.1:g.166G>C

Select item 148434121518.

rs1484341215 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:63556889 (GRCh38)
20:62188242 (GRCh37)
Canonical SPDI:: NC_000020.11:63556888:C:T
Gene:: FNDC11 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.63556889C>T, NC_000020.10:g.62188242C>T

Select item 148427074419.

rs1484270744 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:63557192 (GRCh38)
20:62188545 (GRCh37)
Canonical SPDI:: NC_000020.11:63557191:G:A
Gene:: FNDC11 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.63557192G>A, NC_000020.10:g.62188545G>A