SNP Links for Gene (Select 731656) - SNP

Links from Gene

Items: 1 to 20 of 1322

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Select item 14909853631.

rs1490985363 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:235069394 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235069393:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.235069394C>T, NW_004070865.1:g.38100C>T

Select item 14901688002.

rs1490168800 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:235068932 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235068931:G:C
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.235068932G>C, NW_004070865.1:g.37638G>C

Select item 14900319123.

rs1490031912 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:235069894 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235069893:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.235069894C>T, NW_004070865.1:g.38600C>T

Select item 14899813834.

rs1489981383 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 1:235067659 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235067658:T:
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.235067659del, NW_004070865.1:g.36365del

Select item 14895807235.

rs1489580723 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:235071286 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235071285:T:G
Gene:: LINC01348 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.235071286T>G, NW_004070865.1:g.39992T>G

Select item 14885870396.

rs1488587039 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:235068223 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235068222:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
T=0.000142/4 (TOMMO)
HGVS:: NC_000001.11:g.235068223C>T, NW_004070865.1:g.36929C>T

Select item 14883731787.

rs1488373178 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:235067112 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235067111:G:A
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.235067112G>A, NW_004070865.1:g.35818G>A

Select item 14883434698.

rs1488343469 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 1:235067083 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235067083:TT:TTT
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.235067085dup, NW_004070865.1:g.35791dup

Select item 14882618489.

rs1488261848 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:235067732 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235067731:G:A
Gene:: LINC01348 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.235067732G>A, NW_004070865.1:g.36438G>A, NR_027454.2:n.834C>T, NR_027454.1:n.834C>T

Select item 148645678010.

rs1486456780 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 1:235066272 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235066271:C:A,NC_000001.11:235066271:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00031/2 (1000Genomes)
HGVS:: NC_000001.11:g.235066272C>A, NC_000001.11:g.235066272C>T, NW_004070865.1:g.34978C>A, NW_004070865.1:g.34978C>T

Select item 148637772711.

rs1486377727 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:235066177 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235066176:A:G
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.235066177A>G, NW_004070865.1:g.34883A>G

Select item 148612731412.

rs1486127314 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:235065800 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235065799:A:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.235065800A>T, NW_004070865.1:g.34506A>T

Select item 148588745113.

rs1485887451 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 1:235069004 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235069003:A:C,NC_000001.11:235069003:A:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.235069004A>C, NC_000001.11:g.235069004A>T, NW_004070865.1:g.37710A>C, NW_004070865.1:g.37710A>T

Select item 148566571514.

rs1485665715 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:235069508 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235069507:T:C
Gene:: LINC01348 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.235069508T>C, NW_004070865.1:g.38214T>C, NR_027454.2:n.311A>G, NR_027454.1:n.311A>G

Select item 148449059115.

rs1484490591 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:235065427 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235065426:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.000087/23 (TOPMED)
T=0.000531/15 (TOMMO)
T=0.000546/1 (Korea1K)
HGVS:: NC_000001.11:g.235065427C>T, NW_004070865.1:g.34133C>T

Select item 148442083116.

rs1484420831 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:235065300 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235065299:A:C,NC_000001.11:235065299:A:G
Gene:: LINC01348 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000021/3 (GnomAD)
G=0.000156/1 (1000Genomes)
HGVS:: NC_000001.11:g.235065300A>C, NC_000001.11:g.235065300A>G, NW_004070865.1:g.34006A>C, NW_004070865.1:g.34006A>G

Select item 148398136417.

rs1483981364 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:235069122 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235069121:C:T
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.235069122C>T, NW_004070865.1:g.37828C>T

Select item 148392918618.

rs1483929186 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:235068292 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235068291:T:C,NC_000001.11:235068291:T:G
Gene:: LINC01348 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000043/6 (GnomAD)
HGVS:: NC_000001.11:g.235068292T>C, NC_000001.11:g.235068292T>G, NW_004070865.1:g.36998T>C, NW_004070865.1:g.36998T>G

Select item 148376805919.

rs1483768059 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:235071595 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235071594:G:A
Gene:: LINC01348 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.235071595G>A, NW_004070865.1:g.40301G>A

Select item 148344503320.

rs1483445033 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:235071168 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:235071167:T:C
Gene:: LINC01348 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000029/4 (GnomAD)
C=0.000034/9 (TOPMED)
HGVS:: NC_000001.11:g.235071168T>C, NW_004070865.1:g.39874T>C

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