Links from Gene
Items: 1 to 20 of 26280
1.
rs1491559364 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-,GTGT
[Show Flanks]
- Chromosome:
- 9:121002262
(GRCh38)
9:123764540
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121002260:TGT:T,NC_000009.12:121002260:TGT:TGTGT
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGT=0./0
(
ALFA)
-=0.0001/9
(GnomAD)
-=0.00011/2
(TOMMO)
-=0.00116/2
(Korea1K)
-=0.00333/2
(NorthernSweden)
- HGVS:
2.
rs1491529772 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GG>-
[Show Flanks]
- Chromosome:
- 9:121033013
(GRCh38)
9:123795291
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121033011:GGG:G
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.02487/295
(
ALFA)
-=0.00902/65
(TOMMO)
-=0.06282/49
(Korea1K)
-=0.13362/4138
(GnomAD)
-=0.35755/1378
(ALSPAC)
-=0.36812/1365
(TWINSUK)
- HGVS:
3.
rs1491506765 has merged into rs201849062 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTT>-,T,TT,TTTGTTTTTTTTTTTTTTTTT,TTTT,TTTTGATTTTTTTTTTTTTTTT,TTTTGTTTTTTTTTTTTTTTTT,TTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 9:121037316
(GRCh38)
9:123799594
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTGATTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121037302:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTT
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTTTT=0./0
(
ALFA)
-=0.275/11
(GENOME_DK)
-=0.32089/1607
(1000Genomes)
- HGVS:
NC_000009.12:g.121037316_121037318del, NC_000009.12:g.121037317_121037318del, NC_000009.12:g.121037318del, NC_000009.12:g.121037303_121037318T[16]GTTTTTTTTTTTTTTTTT[1], NC_000009.12:g.121037318dup, NC_000009.12:g.121037303_121037318T[17]GATTTTTTTTTTTTTTTT[1], NC_000009.12:g.121037303_121037318T[17]GTTTTTTTTTTTTTTTTT[1], NC_000009.12:g.121037317_121037318dup, NC_000009.12:g.121037306_121037318dup, NC_000009.12:g.121037305_121037318dup, NC_000009.12:g.121037304_121037318dup, NC_000009.12:g.121037303_121037318dup, NC_000009.12:g.121037318_121037319insTTTTTTTTTTTTTTTTT, NC_000009.12:g.121037318_121037319insTTTTTTTTTTTTTTTTTTTT, NC_000009.12:g.121037303_121037318T[36]GTTTTTTTTTTTTTTTTTT[1], NC_000009.11:g.123799594_123799596del, NC_000009.11:g.123799595_123799596del, NC_000009.11:g.123799596del, NC_000009.11:g.123799581_123799596T[16]GTTTTTTTTTTTTTTTTT[1], NC_000009.11:g.123799596dup, NC_000009.11:g.123799581_123799596T[17]GATTTTTTTTTTTTTTTT[1], NC_000009.11:g.123799581_123799596T[17]GTTTTTTTTTTTTTTTTT[1], NC_000009.11:g.123799595_123799596dup, NC_000009.11:g.123799584_123799596dup, NC_000009.11:g.123799583_123799596dup, NC_000009.11:g.123799582_123799596dup, NC_000009.11:g.123799581_123799596dup, NC_000009.11:g.123799596_123799597insTTTTTTTTTTTTTTTTT, NC_000009.11:g.123799596_123799597insTTTTTTTTTTTTTTTTTTTT, NC_000009.11:g.123799581_123799596T[36]GTTTTTTTTTTTTTTTTTT[1], NG_007364.1:g.17972_17974del, NG_007364.1:g.17973_17974del, NG_007364.1:g.17974del, NG_007364.1:g.17959_17974A[17]CAAAAAAAAAAAAAAAA[1], NG_007364.1:g.17974dup, NG_007364.1:g.17959_17974A[16]TCAAAAAAAAAAAAAAAAA[1], NG_007364.1:g.17959_17974A[17]CAAAAAAAAAAAAAAAAA[1], NG_007364.1:g.17973_17974dup, NG_007364.1:g.17962_17974dup, NG_007364.1:g.17961_17974dup, NG_007364.1:g.17960_17974dup, NG_007364.1:g.17959_17974dup, NG_007364.1:g.17974_17975insAAAAAAAAAAAAAAAAA, NG_007364.1:g.17974_17975insAAAAAAAAAAAAAAAAAAAA, NG_007364.1:g.17959_17974A[18]CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]
4.
rs1491500922 has merged into rs68005313 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 9:121073520
(GRCh38)
9:123835798
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000009.12:121073511:TTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- C5 (Varview), CNTRL (Varview)
- Functional Consequence:
- 2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTT=0./0
(
ALFA)
-=0.2/8
(GENOME_DK)
- HGVS:
NC_000009.12:g.121073520_121073534del, NC_000009.12:g.121073521_121073534del, NC_000009.12:g.121073522_121073534del, NC_000009.12:g.121073523_121073534del, NC_000009.12:g.121073524_121073534del, NC_000009.12:g.121073525_121073534del, NC_000009.12:g.121073526_121073534del, NC_000009.12:g.121073527_121073534del, NC_000009.12:g.121073528_121073534del, NC_000009.12:g.121073529_121073534del, NC_000009.12:g.121073530_121073534del, NC_000009.12:g.121073531_121073534del, NC_000009.12:g.121073532_121073534del, NC_000009.12:g.121073533_121073534del, NC_000009.12:g.121073534del, NC_000009.12:g.121073534dup, NC_000009.12:g.121073533_121073534dup, NC_000009.12:g.121073532_121073534dup, NC_000009.12:g.121073531_121073534dup, NC_000009.12:g.121073530_121073534dup, NC_000009.12:g.121073529_121073534dup, NC_000009.12:g.121073528_121073534dup, NC_000009.12:g.121073523_121073534dup, NC_000009.11:g.123835798_123835812del, NC_000009.11:g.123835799_123835812del, NC_000009.11:g.123835800_123835812del, NC_000009.11:g.123835801_123835812del, NC_000009.11:g.123835802_123835812del, NC_000009.11:g.123835803_123835812del, NC_000009.11:g.123835804_123835812del, NC_000009.11:g.123835805_123835812del, NC_000009.11:g.123835806_123835812del, NC_000009.11:g.123835807_123835812del, NC_000009.11:g.123835808_123835812del, NC_000009.11:g.123835809_123835812del, NC_000009.11:g.123835810_123835812del, NC_000009.11:g.123835811_123835812del, NC_000009.11:g.123835812del, NC_000009.11:g.123835812dup, NC_000009.11:g.123835811_123835812dup, NC_000009.11:g.123835810_123835812dup, NC_000009.11:g.123835809_123835812dup, NC_000009.11:g.123835808_123835812dup, NC_000009.11:g.123835807_123835812dup, NC_000009.11:g.123835806_123835812dup, NC_000009.11:g.123835801_123835812dup
5.
rs1491488667 has merged into rs71370608 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATATAT>-,ATAT,ATATATAT,ATATATATAT,ATATATATATAT
[Show Flanks]
- Chromosome:
- 9:120993431
(GRCh38)
9:123755709
(GRCh37)
- Canonical SPDI:
- NC_000009.12:120993421:TATATATATATATAT:TATATATAT,NC_000009.12:120993421:TATATATATATATAT:TATATATATATAT,NC_000009.12:120993421:TATATATATATATAT:TATATATATATATATAT,NC_000009.12:120993421:TATATATATATATAT:TATATATATATATATATAT,NC_000009.12:120993421:TATATATATATATAT:TATATATATATATATATATAT
- Gene:
- C5 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATATATAT=0./0
(
ALFA)
TA=0.225/9
(GENOME_DK)
TA=0.3938/393
(GoNL)
TA=0.3968/1987
(1000Genomes)
TA=0.4469/2001
(Estonian)
TA=0.4583/275
(NorthernSweden)
- HGVS:
NC_000009.12:g.120993423AT[4], NC_000009.12:g.120993423AT[6], NC_000009.12:g.120993423AT[8], NC_000009.12:g.120993423AT[9], NC_000009.12:g.120993423AT[10], NC_000009.11:g.123755701AT[4], NC_000009.11:g.123755701AT[6], NC_000009.11:g.123755701AT[8], NC_000009.11:g.123755701AT[9], NC_000009.11:g.123755701AT[10], NG_007364.1:g.61842TA[4], NG_007364.1:g.61842TA[6], NG_007364.1:g.61842TA[8], NG_007364.1:g.61842TA[9], NG_007364.1:g.61842TA[10]
6.
rs1491442268 has merged into rs757615788 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATATAT>-,AT,ATAT,ATATATAT,ATATATATAT
[Show Flanks]
- Chromosome:
- 9:121002224
(GRCh38)
9:123764502
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121002216:TATATATATATAT:TATATAT,NC_000009.12:121002216:TATATATATATAT:TATATATAT,NC_000009.12:121002216:TATATATATATAT:TATATATATAT,NC_000009.12:121002216:TATATATATATAT:TATATATATATATAT,NC_000009.12:121002216:TATATATATATAT:TATATATATATATATAT
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATAT=0./0
(
ALFA)
-=0.0877/338
(ALSPAC)
-=0.2/8
(GENOME_DK)
- HGVS:
NC_000009.12:g.121002218AT[3], NC_000009.12:g.121002218AT[4], NC_000009.12:g.121002218AT[5], NC_000009.12:g.121002218AT[7], NC_000009.12:g.121002218AT[8], NC_000009.11:g.123764496AT[3], NC_000009.11:g.123764496AT[4], NC_000009.11:g.123764496AT[5], NC_000009.11:g.123764496AT[7], NC_000009.11:g.123764496AT[8], NG_007364.1:g.53049TA[3], NG_007364.1:g.53049TA[4], NG_007364.1:g.53049TA[5], NG_007364.1:g.53049TA[7], NG_007364.1:g.53049TA[8]
7.
rs1491436962 has merged into rs1173632890 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 9:121025436
(GRCh38)
9:123787714
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:121025419:ACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACAC
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Clinical significance:
- benign
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACACACAC=0./0
(
ALFA)
-=0.1845/924
(1000Genomes)
- HGVS:
NC_000009.12:g.121025420AC[8], NC_000009.12:g.121025420AC[9], NC_000009.12:g.121025420AC[10], NC_000009.12:g.121025420AC[11], NC_000009.12:g.121025420AC[12], NC_000009.12:g.121025420AC[13], NC_000009.12:g.121025420AC[14], NC_000009.12:g.121025420AC[16], NC_000009.12:g.121025420AC[17], NC_000009.12:g.121025420AC[18], NC_000009.12:g.121025420AC[19], NC_000009.12:g.121025420AC[20], NC_000009.12:g.121025420AC[21], NC_000009.12:g.121025420AC[22], NC_000009.12:g.121025420AC[23], NC_000009.12:g.121025420AC[24], NC_000009.12:g.121025420AC[25], NC_000009.12:g.121025420AC[26], NC_000009.11:g.123787698AC[8], NC_000009.11:g.123787698AC[9], NC_000009.11:g.123787698AC[10], NC_000009.11:g.123787698AC[11], NC_000009.11:g.123787698AC[12], NC_000009.11:g.123787698AC[13], NC_000009.11:g.123787698AC[14], NC_000009.11:g.123787698AC[16], NC_000009.11:g.123787698AC[17], NC_000009.11:g.123787698AC[18], NC_000009.11:g.123787698AC[19], NC_000009.11:g.123787698AC[20], NC_000009.11:g.123787698AC[21], NC_000009.11:g.123787698AC[22], NC_000009.11:g.123787698AC[23], NC_000009.11:g.123787698AC[24], NC_000009.11:g.123787698AC[25], NC_000009.11:g.123787698AC[26], NG_007364.1:g.29828GT[8], NG_007364.1:g.29828GT[9], NG_007364.1:g.29828GT[10], NG_007364.1:g.29828GT[11], NG_007364.1:g.29828GT[12], NG_007364.1:g.29828GT[13], NG_007364.1:g.29828GT[14], NG_007364.1:g.29828GT[16], NG_007364.1:g.29828GT[17], NG_007364.1:g.29828GT[18], NG_007364.1:g.29828GT[19], NG_007364.1:g.29828GT[20], NG_007364.1:g.29828GT[21], NG_007364.1:g.29828GT[22], NG_007364.1:g.29828GT[23], NG_007364.1:g.29828GT[24], NG_007364.1:g.29828GT[25], NG_007364.1:g.29828GT[26]
9.
rs1491386802 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 9:121037303
(GRCh38)
9:123799582
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121037303:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTGTTTTTTTTTTTTTTT
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
TTTTTTTTTTTTTTTG=0.00004/1
(TOMMO)
- HGVS:
11.
rs1491310922 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->AC
[Show Flanks]
- Chromosome:
- 9:121002237
(GRCh38)
9:123764516
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121002237::AC
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AC=0.00868/103
(
ALFA)
AC=0.00029/15
(GnomAD)
- HGVS:
12.
rs1491288286 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->AC
[Show Flanks]
- Chromosome:
- 9:121002261
(GRCh38)
9:123764540
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121002261::AC
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AC=0.00008/1
(
ALFA)
AC=0.00026/24
(GnomAD)
AC=0.00348/6
(Korea1K)
AC=0.00669/108
(TOMMO)
- HGVS:
13.
rs1491282570 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 9:121035151
(GRCh38)
9:123797429
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121035150:GT:
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.0264/98
(TWINSUK)
-=0.0267/103
(ALSPAC)
- HGVS:
14.
rs1491257203 has merged into rs113125021 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTT>-,T,TT,TTT,TTTTT,TTTTTT
[Show Flanks]
- Chromosome:
- 9:121069539
(GRCh38)
9:123831817
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTT,NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000009.12:121069528:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTT=0.00008/1
(
ALFA)
T=0.1/60
(NorthernSweden)
- HGVS:
NC_000009.12:g.121069539_121069542del, NC_000009.12:g.121069540_121069542del, NC_000009.12:g.121069541_121069542del, NC_000009.12:g.121069542del, NC_000009.12:g.121069542dup, NC_000009.12:g.121069541_121069542dup, NC_000009.11:g.123831817_123831820del, NC_000009.11:g.123831818_123831820del, NC_000009.11:g.123831819_123831820del, NC_000009.11:g.123831820del, NC_000009.11:g.123831820dup, NC_000009.11:g.123831819_123831820dup
17.
rs1491039401 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TG>-
[Show Flanks]
- Chromosome:
- 9:120984216
(GRCh38)
9:123746494
(GRCh37)
- Canonical SPDI:
- NC_000009.12:120984215:TG:
- Gene:
- C5 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
-=0.000049/13
(TOPMED)
- HGVS:
18.
rs1491037167 has merged into rs41308022 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CACA>-,CA,CACACA,CACACACA,CACACACACA
[Show Flanks]
- Chromosome:
- 9:121033087
(GRCh38)
9:123795365
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121033075:ACACACACACACACA:ACACACACACA,NC_000009.12:121033075:ACACACACACACACA:ACACACACACACA,NC_000009.12:121033075:ACACACACACACACA:ACACACACACACACACA,NC_000009.12:121033075:ACACACACACACACA:ACACACACACACACACACA,NC_000009.12:121033075:ACACACACACACACA:ACACACACACACACACACACA
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACACACACACACA=0./0
(
ALFA)
AC=0.10833/65
(NorthernSweden)
AC=0.125/5
(GENOME_DK)
AC=0.13551/29
(Vietnamese)
AC=0.14335/718
(1000Genomes)
AC=0.20906/383
(Korea1K)
- HGVS:
NC_000009.12:g.121033077CA[5], NC_000009.12:g.121033077CA[6], NC_000009.12:g.121033077CA[8], NC_000009.12:g.121033077CA[9], NC_000009.12:g.121033077CA[10], NC_000009.11:g.123795355CA[5], NC_000009.11:g.123795355CA[6], NC_000009.11:g.123795355CA[8], NC_000009.11:g.123795355CA[9], NC_000009.11:g.123795355CA[10], NG_007364.1:g.22188GT[5], NG_007364.1:g.22188GT[6], NG_007364.1:g.22188GT[8], NG_007364.1:g.22188GT[9], NG_007364.1:g.22188GT[10]
19.
rs1490992283 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATT>-
[Show Flanks]
- Chromosome:
- 9:121036806
(GRCh38)
9:123799084
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121036804:TATT:T
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000671/3
(
ALFA)
-=0.000021/3
(GnomAD)
-=0.00067/3
(Estonian)
- HGVS:
20.
rs1490983869 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 9:121027998
(GRCh38)
9:123790276
(GRCh37)
- Canonical SPDI:
- NC_000009.12:121027997:A:G
- Gene:
- C5 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS: