SNP Links for Gene (Select 6847) - SNP

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Select item 14915743971.

rs1491574397 has merged into rs532170484 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT [Show Flanks]
Chromosome:: 1:114914415 (GRCh38)
1:115457036 (GRCh37)
Canonical SPDI:: NC_000001.11:114914405:TTTTTTTTTTT:TTTTTTTTT,NC_000001.11:114914405:TTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:114914405:TTTTTTTTTTT:TTTTTTTTTTTT
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTT=0./0 (ALFA)
-=0.000071/2 (TOMMO)
-=0.022067/5841 (TOPMED)
HGVS:: NC_000001.11:g.114914415_114914416del, NC_000001.11:g.114914416del, NC_000001.11:g.114914416dup, NC_000001.10:g.115457036_115457037del, NC_000001.10:g.115457037del, NC_000001.10:g.115457037dup

Select item 14914825412.

rs1491482541 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GA [Show Flanks]
Chromosome:: 1:114857137 (GRCh38)
1:115399759 (GRCh37)
Canonical SPDI:: NC_000001.11:114857137:A:AGA
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
HGVS:: NC_000001.11:g.114857138_114857139insGA, NC_000001.10:g.115399759_115399760insGA

Select item 14914348823.

rs1491434882 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TAAA,TAAAA [Show Flanks]
Chromosome:: 1:114988080 (GRCh38)
1:115530702 (GRCh37)
Canonical SPDI:: NC_000001.11:114988080:AA:AATAAA,NC_000001.11:114988080:AA:AATAAAA
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AATAAAA=0.00135/16 (ALFA)
HGVS:: NC_000001.11:g.114988082_114988083insTAAA, NC_000001.11:g.114988082_114988083insTAAAA, NC_000001.10:g.115530703_115530704insTAAA, NC_000001.10:g.115530703_115530704insTAAAA

Select item 14913165084.

rs1491316508 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:114857158 (GRCh38)
1:115399779 (GRCh37)
Canonical SPDI:: NC_000001.11:114857157:G:
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0.00043/7 (ALFA)
HGVS:: NC_000001.11:g.114857158del, NC_000001.10:g.115399779del

Select item 14912699495.

rs1491269949 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT [Show Flanks]
Chromosome:: 1:114875172 (GRCh38)
1:115417794 (GRCh37)
Canonical SPDI:: NC_000001.11:114875172:T:TGT
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TGT=0./0 (ALFA)
TG=0.000035/4 (GnomAD)
HGVS:: NC_000001.11:g.114875173_114875174insGT, NC_000001.10:g.115417794_115417795insGT

Select item 14912616496.

rs1491261649 has merged into rs150956388 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT,TTTT [Show Flanks]
Chromosome:: 1:114895435 (GRCh38)
1:115438056 (GRCh37)
Canonical SPDI:: NC_000001.11:114895426:TTTTTTTTTT:TTTTTTTT,NC_000001.11:114895426:TTTTTTTTTT:TTTTTTTTT,NC_000001.11:114895426:TTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:114895426:TTTTTTTTTT:TTTTTTTTTTTT
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0.00061/16 (ALFA)
T=0.00095/16 (TOMMO)
T=0.00382/7 (Korea1K)
T=0.025/1 (GENOME_DK)
T=0.025/15 (NorthernSweden)
T=0.03525/157 (Estonian)
-=0.03574/179 (1000Genomes)
T=0.0481/48 (GoNL)
HGVS:: NC_000001.11:g.114895435_114895436del, NC_000001.11:g.114895436del, NC_000001.11:g.114895436dup, NC_000001.11:g.114895435_114895436dup, NC_000001.10:g.115438056_115438057del, NC_000001.10:g.115438057del, NC_000001.10:g.115438057dup, NC_000001.10:g.115438056_115438057dup

Select item 14912489887.

rs1491248988 [Homo sapiens]

Variant type:: INS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:114914406 (GRCh38)
1:115457028 (GRCh37)
Canonical SPDI:: NC_000001.11:114914406::A
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.114914406_114914407insA, NC_000001.10:g.115457027_115457028insA

Select item 14911412378.

rs1491141237 has merged into rs67335338 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA [Show Flanks]
Chromosome:: 1:114881078 (GRCh38)
1:115423699 (GRCh37)
Canonical SPDI:: NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000001.11:114881056:ACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACACACACA=0./0 (ALFA)
-=0.1567/287 (Korea1K)
HGVS:: NC_000001.11:g.114881058CA[10], NC_000001.11:g.114881058CA[11], NC_000001.11:g.114881058CA[12], NC_000001.11:g.114881058CA[13], NC_000001.11:g.114881058CA[14], NC_000001.11:g.114881058CA[15], NC_000001.11:g.114881058CA[16], NC_000001.11:g.114881058CA[17], NC_000001.11:g.114881058CA[18], NC_000001.11:g.114881058CA[20], NC_000001.11:g.114881058CA[21], NC_000001.11:g.114881058CA[22], NC_000001.11:g.114881058CA[23], NC_000001.11:g.114881058CA[24], NC_000001.11:g.114881058CA[25], NC_000001.11:g.114881058CA[26], NC_000001.11:g.114881058CA[28], NC_000001.10:g.115423679CA[10], NC_000001.10:g.115423679CA[11], NC_000001.10:g.115423679CA[12], NC_000001.10:g.115423679CA[13], NC_000001.10:g.115423679CA[14], NC_000001.10:g.115423679CA[15], NC_000001.10:g.115423679CA[16], NC_000001.10:g.115423679CA[17], NC_000001.10:g.115423679CA[18], NC_000001.10:g.115423679CA[20], NC_000001.10:g.115423679CA[21], NC_000001.10:g.115423679CA[22], NC_000001.10:g.115423679CA[23], NC_000001.10:g.115423679CA[24], NC_000001.10:g.115423679CA[25], NC_000001.10:g.115423679CA[26], NC_000001.10:g.115423679CA[28]

Select item 14911076199.

rs1491107619 has merged into rs746711903 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTT>-,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 1:114853593 (GRCh38)
1:115396214 (GRCh37)
Canonical SPDI:: NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000001.11:114853582:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: SYCP1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.114853593_114853603del, NC_000001.11:g.114853598_114853603del, NC_000001.11:g.114853599_114853603del, NC_000001.11:g.114853600_114853603del, NC_000001.11:g.114853601_114853603del, NC_000001.11:g.114853602_114853603del, NC_000001.11:g.114853603del, NC_000001.11:g.114853603dup, NC_000001.11:g.114853602_114853603dup, NC_000001.11:g.114853601_114853603dup, NC_000001.11:g.114853600_114853603dup, NC_000001.11:g.114853599_114853603dup, NC_000001.11:g.114853598_114853603dup, NC_000001.11:g.114853597_114853603dup, NC_000001.11:g.114853596_114853603dup, NC_000001.11:g.114853595_114853603dup, NC_000001.11:g.114853594_114853603dup, NC_000001.11:g.114853593_114853603dup, NC_000001.11:g.114853586_114853603dup, NC_000001.11:g.114853603_114853604insTTTTTTTTTTTTTTTTTTTTTT, NC_000001.11:g.114853603_114853604insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.115396214_115396224del, NC_000001.10:g.115396219_115396224del, NC_000001.10:g.115396220_115396224del, NC_000001.10:g.115396221_115396224del, NC_000001.10:g.115396222_115396224del, NC_000001.10:g.115396223_115396224del, NC_000001.10:g.115396224del, NC_000001.10:g.115396224dup, NC_000001.10:g.115396223_115396224dup, NC_000001.10:g.115396222_115396224dup, NC_000001.10:g.115396221_115396224dup, NC_000001.10:g.115396220_115396224dup, NC_000001.10:g.115396219_115396224dup, NC_000001.10:g.115396218_115396224dup, NC_000001.10:g.115396217_115396224dup, NC_000001.10:g.115396216_115396224dup, NC_000001.10:g.115396215_115396224dup, NC_000001.10:g.115396214_115396224dup, NC_000001.10:g.115396207_115396224dup, NC_000001.10:g.115396224_115396225insTTTTTTTTTTTTTTTTTTTTTT, NC_000001.10:g.115396224_115396225insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149104445110.

rs1491044451 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 1:114988097 (GRCh38)
1:115530718 (GRCh37)
Canonical SPDI:: NC_000001.11:114988095:AGA:A
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.114988097_114988098del, NC_000001.10:g.115530718_115530719del

Select item 149102504111.

rs1491025041 has merged into rs34553973 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:114988091 (GRCh38)
1:115530712 (GRCh37)
Canonical SPDI:: NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:114988080:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAA=0./0 (ALFA)
-=0.4235/2121 (1000Genomes)
HGVS:: NC_000001.11:g.114988091_114988096del, NC_000001.11:g.114988093_114988096del, NC_000001.11:g.114988094_114988096del, NC_000001.11:g.114988095_114988096del, NC_000001.11:g.114988096del, NC_000001.11:g.114988096dup, NC_000001.11:g.114988095_114988096dup, NC_000001.11:g.114988094_114988096dup, NC_000001.11:g.114988093_114988096dup, NC_000001.11:g.114988092_114988096dup, NC_000001.11:g.114988091_114988096dup, NC_000001.11:g.114988090_114988096dup, NC_000001.11:g.114988089_114988096dup, NC_000001.11:g.114988088_114988096dup, NC_000001.11:g.114988087_114988096dup, NC_000001.11:g.114988086_114988096dup, NC_000001.11:g.114988085_114988096dup, NC_000001.11:g.114988082_114988096dup, NC_000001.11:g.114988081_114988096dup, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988096_114988097insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.11:g.114988081_114988096A[21]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1], NC_000001.10:g.115530712_115530717del, NC_000001.10:g.115530714_115530717del, NC_000001.10:g.115530715_115530717del, NC_000001.10:g.115530716_115530717del, NC_000001.10:g.115530717del, NC_000001.10:g.115530717dup, NC_000001.10:g.115530716_115530717dup, NC_000001.10:g.115530715_115530717dup, NC_000001.10:g.115530714_115530717dup, NC_000001.10:g.115530713_115530717dup, NC_000001.10:g.115530712_115530717dup, NC_000001.10:g.115530711_115530717dup, NC_000001.10:g.115530710_115530717dup, NC_000001.10:g.115530709_115530717dup, NC_000001.10:g.115530708_115530717dup, NC_000001.10:g.115530707_115530717dup, NC_000001.10:g.115530706_115530717dup, NC_000001.10:g.115530703_115530717dup, NC_000001.10:g.115530702_115530717dup, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530717_115530718insAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000001.10:g.115530702_115530717A[21]GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA[1]

Select item 149099507312.

rs1490995073 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGCTCACC [Show Flanks]
Chromosome:: 1:114927888 (GRCh38)
1:115470510 (GRCh37)
Canonical SPDI:: NC_000001.11:114927888:CAGCTCACC:CAGCTCACCAGCTCACC
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAGCTCACCAGCTCACC=0./0 (ALFA)
CAGCTCAC=0.000004/1 (TOPMED)
CAGCTCAC=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.114927890_114927897dup, NC_000001.10:g.115470511_115470518dup

Select item 149097727013.

rs1490977270 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:114867084 (GRCh38)
1:115409705 (GRCh37)
Canonical SPDI:: NC_000001.11:114867083:A:G
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114867084A>G, NC_000001.10:g.115409705A>G

Select item 149097426014.

rs1490974260 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:114906694 (GRCh38)
1:115449315 (GRCh37)
Canonical SPDI:: NC_000001.11:114906693:T:C
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114906694T>C, NC_000001.10:g.115449315T>C

Select item 149096949015.

rs1490969490 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114929053 (GRCh38)
1:115471674 (GRCh37)
Canonical SPDI:: NC_000001.11:114929052:C:T
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.114929053C>T, NC_000001.10:g.115471674C>T

Select item 149094365616.

rs1490943656 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114970605 (GRCh38)
1:115513226 (GRCh37)
Canonical SPDI:: NC_000001.11:114970604:C:T
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00034/4 (ALFA)
HGVS:: NC_000001.11:g.114970605C>T, NC_000001.10:g.115513226C>T

Select item 149093812517.

rs1490938125 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:114969588 (GRCh38)
1:115512209 (GRCh37)
Canonical SPDI:: NC_000001.11:114969587:G:A
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.114969588G>A, NC_000001.10:g.115512209G>A

Select item 149091100918.

rs1490911009 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:114892642 (GRCh38)
1:115435263 (GRCh37)
Canonical SPDI:: NC_000001.11:114892641:C:T
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114892642C>T, NC_000001.10:g.115435263C>T

Select item 149090214819.

rs1490902148 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:114908972 (GRCh38)
1:115451593 (GRCh37)
Canonical SPDI:: NC_000001.11:114908971:T:C
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.114908972T>C, NC_000001.10:g.115451593T>C

Select item 149090057320.

rs1490900573 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:114945014 (GRCh38)
1:115487635 (GRCh37)
Canonical SPDI:: NC_000001.11:114945013:A:T
Gene:: SYCP1 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.114945014A>T, NC_000001.10:g.115487635A>T

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