SNP Links for Gene (Select 677834) - SNP

Links from Gene

Items: 1 to 20 of 769

<< First< Prev

Page of 39

Next >Last >>

Select item 14907387591.

rs1490738759 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 1:39568778 (GRCh38)
1:40034450 (GRCh37)
Canonical SPDI:: NC_000001.11:39568777:T:A,NC_000001.11:39568777:T:C,NC_000001.11:39568777:T:G
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.39568778T>A, NC_000001.11:g.39568778T>C, NC_000001.11:g.39568778T>G, NC_000001.10:g.40034450T>A, NC_000001.10:g.40034450T>C, NC_000001.10:g.40034450T>G

Select item 14902498162.

rs1490249816 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:39567366 (GRCh38)
1:40033038 (GRCh37)
Canonical SPDI:: NC_000001.11:39567365:C:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.39567366C>A, NC_000001.10:g.40033038C>A

Select item 14894473413.

rs1489447341 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:39566880 (GRCh38)
1:40032552 (GRCh37)
Canonical SPDI:: NC_000001.11:39566879:T:C
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00006/1 (TOMMO)
HGVS:: NC_000001.11:g.39566880T>C, NC_000001.10:g.40032552T>C

Select item 14892657724.

rs1489265772 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:39568494 (GRCh38)
1:40034166 (GRCh37)
Canonical SPDI:: NC_000001.11:39568493:G:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.39568494G>A, NC_000001.10:g.40034166G>A

Select item 14884157365.

rs1488415736 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:39567481 (GRCh38)
1:40033153 (GRCh37)
Canonical SPDI:: NC_000001.11:39567480:C:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000001.11:g.39567481C>A, NC_000001.10:g.40033153C>A, NR_002983.1:n.30G>T

Select item 14862968706.

rs1486296870 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:39568742 (GRCh38)
1:40034414 (GRCh37)
Canonical SPDI:: NC_000001.11:39568741:G:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.39568742G>A, NC_000001.10:g.40034414G>A

Select item 14850927427.

rs1485092742 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:39568546 (GRCh38)
1:40034218 (GRCh37)
Canonical SPDI:: NC_000001.11:39568545:C:G
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.39568546C>G, NC_000001.10:g.40034218C>G

Select item 14846652698.

rs1484665269 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:39569199 (GRCh38)
1:40034871 (GRCh37)
Canonical SPDI:: NC_000001.11:39569198:A:G
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.39569199A>G, NC_000001.10:g.40034871A>G

Select item 14846094479.

rs1484609447 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:39568218 (GRCh38)
1:40033890 (GRCh37)
Canonical SPDI:: NC_000001.11:39568217:C:T
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.39568218C>T, NC_000001.10:g.40033890C>T

Select item 148452771910.

rs1484527719 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:39567506 (GRCh38)
1:40033178 (GRCh37)
Canonical SPDI:: NC_000001.11:39567505:T:C
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000001.11:g.39567506T>C, NC_000001.10:g.40033178T>C, NR_002983.1:n.5A>G

Select item 148430124011.

rs1484301240 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:39567080 (GRCh38)
1:40032752 (GRCh37)
Canonical SPDI:: NC_000001.11:39567079:G:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.39567080G>A, NC_000001.10:g.40032752G>A

Select item 148312111912.

rs1483121119 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:39567889 (GRCh38)
1:40033561 (GRCh37)
Canonical SPDI:: NC_000001.11:39567888:A:C
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.39567889A>C, NC_000001.10:g.40033561A>C

Select item 148116328813.

rs1481163288 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:39567864 (GRCh38)
1:40033536 (GRCh37)
Canonical SPDI:: NC_000001.11:39567863:C:G
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.39567864C>G, NC_000001.10:g.40033536C>G

Select item 148099872814.

rs1480998728 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:39568400 (GRCh38)
1:40034072 (GRCh37)
Canonical SPDI:: NC_000001.11:39568399:C:T
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.39568400C>T, NC_000001.10:g.40034072C>T

Select item 148094823815.

rs1480948238 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACT>- [Show Flanks]
Chromosome:: 1:39567643 (GRCh38)
1:40033315 (GRCh37)
Canonical SPDI:: NC_000001.11:39567640:CTACT:CT
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CT=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.39567643_39567645del, NC_000001.10:g.40033315_40033317del

Select item 147729812116.

rs1477298121 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:39567223 (GRCh38)
1:40032895 (GRCh37)
Canonical SPDI:: NC_000001.11:39567222:T:G
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.39567223T>G, NC_000001.10:g.40032895T>G

Select item 147600249917.

rs1476002499 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:39567386 (GRCh38)
1:40033058 (GRCh37)
Canonical SPDI:: NC_000001.11:39567385:G:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000001.11:g.39567386G>A, NC_000001.10:g.40033058G>A, NR_002983.1:n.125C>T

Select item 147507778518.

rs1475077785 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:39568727 (GRCh38)
1:40034399 (GRCh37)
Canonical SPDI:: NC_000001.11:39568726:C:G,NC_000001.11:39568726:C:T
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.39568727C>G, NC_000001.11:g.39568727C>T, NC_000001.10:g.40034399C>G, NC_000001.10:g.40034399C>T

Select item 147220080519.

rs1472200805 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:39568371 (GRCh38)
1:40034043 (GRCh37)
Canonical SPDI:: NC_000001.11:39568370:G:T
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.39568371G>T, NC_000001.10:g.40034043G>T

Select item 147162694620.

rs1471626946 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:39567498 (GRCh38)
1:40033170 (GRCh37)
Canonical SPDI:: NC_000001.11:39567497:G:A
Gene:: PABPC4 (Varview), SNORA55 (Varview), PABPC4-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.39567498G>A, NC_000001.10:g.40033170G>A, NR_002983.1:n.13C>T

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 769

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity