SNP Links for Gene (Select 654817) - SNP

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Items: 1 to 20 of 2000

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Select item 14908975591.

rs1490897559 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 7:75156300 (GRCh38)
7:74572107 (GRCh37)
Canonical SPDI:: NC_000007.14:75156300:TTTTTT:TTTTTTT
Gene:: NCF1C (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTT=0./0 (ALFA)
T=0.000009/1 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000007.14:g.75156306dup, NW_003871064.1:g.2685542dup, NC_000007.13:g.74572112dup

Select item 14907908192.

rs1490790819 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 7:75164228 (GRCh38)
7:74580033 (GRCh37)
Canonical SPDI:: NC_000007.14:75164227:T:A
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000018/2 (GnomAD)
HGVS:: NC_000007.14:g.75164228T>A, NW_003871064.1:g.2693464T>A, NC_000007.13:g.74580033T>A

Select item 14905154893.

rs1490515489 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:75165736 (GRCh38)
7:74581541 (GRCh37)
Canonical SPDI:: NC_000007.14:75165735:G:A
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000007.14:g.75165736G>A, NW_003871064.1:g.2694972G>A, NC_000007.13:g.74581541G>A

Select item 14904086154.

rs1490408615 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:75156726 (GRCh38)
7:74572532 (GRCh37)
Canonical SPDI:: NC_000007.14:75156725:A:G
Gene:: NCF1C (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00014/2 (TOMMO)
HGVS:: NC_000007.14:g.75156726A>G, NW_003871064.1:g.2685962A>G, NC_000007.13:g.74572532A>G, NR_003187.3:n.1294T>C, NM_001040003.1:c.*68T>C

Select item 14899723615.

rs1489972361 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 7:75163863 (GRCh38)
7:74579668 (GRCh37)
Canonical SPDI:: NC_000007.14:75163862:T:G
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.75163863T>G, NW_003871064.1:g.2693099T>G, NC_000007.13:g.74579668T>G

Select item 14897137646.

rs1489713764 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:75157774 (GRCh38)
7:74573580 (GRCh37)
Canonical SPDI:: NC_000007.14:75157773:C:A
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.75157774C>A, NW_003871064.1:g.2687010C>A, NC_000007.13:g.74573580C>A

Select item 14895981567.

rs1489598156 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:75165116 (GRCh38)
7:74580921 (GRCh37)
Canonical SPDI:: NC_000007.14:75165115:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000007.14:g.75165116C>T, NW_003871064.1:g.2694352C>T, NC_000007.13:g.74580921C>T

Select item 14894600978.

rs1489460097 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 7:75162099 (GRCh38)
7:74577904 (GRCh37)
Canonical SPDI:: NC_000007.14:75162098:A:C,NC_000007.14:75162098:A:G
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
HGVS:: NC_000007.14:g.75162099A>C, NC_000007.14:g.75162099A>G, NW_003871064.1:g.2691335A>C, NW_003871064.1:g.2691335A>G, NC_000007.13:g.74577904A>C, NC_000007.13:g.74577904A>G

Select item 14893318049.

rs1489331804 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 7:75163434 (GRCh38)
7:74579239 (GRCh37)
Canonical SPDI:: NC_000007.14:75163433:G:C,NC_000007.14:75163433:G:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000017/2 (GnomAD)
HGVS:: NC_000007.14:g.75163434G>C, NC_000007.14:g.75163434G>T, NW_003871064.1:g.2692670G>C, NW_003871064.1:g.2692670G>T, NC_000007.13:g.74579239G>C, NC_000007.13:g.74579239G>T

Select item 148925888910.

rs1489258889 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:75162477 (GRCh38)
7:74578282 (GRCh37)
Canonical SPDI:: NC_000007.14:75162476:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000106/3 (TOMMO)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000007.14:g.75162477C>T, NW_003871064.1:g.2691713C>T, NC_000007.13:g.74578282C>T

Select item 148891399511.

rs1488913995 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:75170826 (GRCh38)
7:74586630 (GRCh37)
Canonical SPDI:: NC_000007.14:75170825:G:A
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000007.14:g.75170826G>A, NW_003871064.1:g.2700062G>A, NC_000007.13:g.74586630G>A

Select item 148862747312.

rs1488627473 has merged into rs587716880 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:75157304 (GRCh38)
7:74573110 (GRCh37)
Canonical SPDI:: NC_000007.14:75157303:G:A
Gene:: NCF1C (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000959/20 (ALFA)
A=0.000418/59 (GnomAD_exomes)
A=0.000616/8 (ExAC)
A=0.001198/6 (1000Genomes)
A=0.001764/467 (TOPMED)
A=0.00177/247 (GnomAD)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000007.14:g.75157304G>A, NW_003871064.1:g.2686540G>A, NC_000007.13:g.74573110G>A, NR_003187.3:n.1050C>T, NM_001040003.1:c.925C>T

Select item 148823057613.

rs1488230576 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 7:75165802 (GRCh38)
7:74581607 (GRCh37)
Canonical SPDI:: NC_000007.14:75165801:C:A,NC_000007.14:75165801:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00468/30 (1000Genomes)
HGVS:: NC_000007.14:g.75165802C>A, NC_000007.14:g.75165802C>T, NW_003871064.1:g.2695038C>A, NW_003871064.1:g.2695038C>T, NC_000007.13:g.74581607C>A, NC_000007.13:g.74581607C>T

Select item 148805603414.

rs1488056034 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 7:75157392 (GRCh38)
7:74573198 (GRCh37)
Canonical SPDI:: NC_000007.14:75157391:C:A,NC_000007.14:75157391:C:G,NC_000007.14:75157391:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
G=0.000014/2 (GnomAD_exomes)
HGVS:: NC_000007.14:g.75157392C>A, NC_000007.14:g.75157392C>G, NC_000007.14:g.75157392C>T, NW_003871064.1:g.2686628C>A, NW_003871064.1:g.2686628C>G, NW_003871064.1:g.2686628C>T, NC_000007.13:g.74573198C>A, NC_000007.13:g.74573198C>G, NC_000007.13:g.74573198C>T, NR_003187.3:n.962G>T, NR_003187.3:n.962G>C, NR_003187.3:n.962G>A, NM_001040003.1:c.837G>T, NM_001040003.1:c.837G>C, NM_001040003.1:c.837G>A

Select item 148798267615.

rs1487982676 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:75156818 (GRCh38)
7:74572624 (GRCh37)
Canonical SPDI:: NC_000007.14:75156817:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.75156818C>T, NW_003871064.1:g.2686054C>T, NC_000007.13:g.74572624C>T, NR_003187.3:n.1202G>A, NM_001040003.1:c.1077G>A

Select item 148790028216.

rs1487900282 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:75162691 (GRCh38)
7:74578496 (GRCh37)
Canonical SPDI:: NC_000007.14:75162690:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000007.14:g.75162691C>T, NW_003871064.1:g.2691927C>T, NC_000007.13:g.74578496C>T

Select item 148760000517.

rs1487600005 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 7:75162089 (GRCh38)
7:74577894 (GRCh37)
Canonical SPDI:: NC_000007.14:75162088:C:G
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00582/69 (ALFA)
G=0.00625/40 (1000Genomes)
G=0.00756/590 (GnomAD)
C=0.5/2 (SGDP_PRJ)
HGVS:: NC_000007.14:g.75162089C>G, NW_003871064.1:g.2691325C>G, NC_000007.13:g.74577894C>G

Select item 148714365818.

rs1487143658 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 7:75163948 (GRCh38)
7:74579753 (GRCh37)
Canonical SPDI:: NC_000007.14:75163947:T:C,NC_000007.14:75163947:T:G
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.75163948T>C, NC_000007.14:g.75163948T>G, NW_003871064.1:g.2693184T>C, NW_003871064.1:g.2693184T>G, NC_000007.13:g.74579753T>C, NC_000007.13:g.74579753T>G

Select item 148693609319.

rs1486936093 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 7:75160101 (GRCh38)
7:74575906 (GRCh37)
Canonical SPDI:: NC_000007.14:75160100:A:C,NC_000007.14:75160100:A:G
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00009/1 (ALFA)
G=0.00002/1 (GnomAD)
C=0.04138/120 (KOREAN)
HGVS:: NC_000007.14:g.75160101A>C, NC_000007.14:g.75160101A>G, NW_003871064.1:g.2689337A>C, NW_003871064.1:g.2689337A>G, NC_000007.13:g.74575906A>C, NC_000007.13:g.74575906A>G

Select item 148690527520.

rs1486905275 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 7:75158902 (GRCh38)
7:74574708 (GRCh37)
Canonical SPDI:: NC_000007.14:75158901:C:A,NC_000007.14:75158901:C:T
Gene:: NCF1C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.00004/3 (GnomAD)
A=0.00031/2 (1000Genomes)
HGVS:: NC_000007.14:g.75158902C>A, NC_000007.14:g.75158902C>T, NW_003871064.1:g.2688138C>A, NW_003871064.1:g.2688138C>T, NC_000007.13:g.74574708C>A, NC_000007.13:g.74574708C>T

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