Links from Gene
Items: 1 to 20 of 12707
1.
rs1491580537 has merged into rs199997128 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA
[Show Flanks]
- Chromosome:
- 5:178008131
(GRCh38)
5:177435132
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:178008120:AAAAAAAAAAAA:AAAAAAAAAAAAAAAAA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.048333/29
(NorthernSweden)
-=0.127542/33759
(TOPMED)
- HGVS:
NC_000005.10:g.178008131_178008132del, NC_000005.10:g.178008132del, NC_000005.10:g.178008132dup, NC_000005.10:g.178008131_178008132dup, NC_000005.10:g.178008130_178008132dup, NC_000005.10:g.178008129_178008132dup, NC_000005.10:g.178008128_178008132dup, NC_000005.9:g.177435132_177435133del, NC_000005.9:g.177435133del, NC_000005.9:g.177435133dup, NC_000005.9:g.177435132_177435133dup, NC_000005.9:g.177435131_177435133dup, NC_000005.9:g.177435130_177435133dup, NC_000005.9:g.177435129_177435133dup, NR_149722.1:n.440_441del, NR_149722.1:n.441del, NR_149722.1:n.441dup, NR_149722.1:n.440_441dup, NR_149722.1:n.439_441dup, NR_149722.1:n.438_441dup, NR_149722.1:n.437_441dup
2.
rs1491550785 has merged into rs36051284 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 5:178055283
(GRCh38)
5:177482284
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178055271:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAA=0./0
(
ALFA)
-=0.000015/4
(TOPMED)
-=0.394369/1975
(1000Genomes)
- HGVS:
NC_000005.10:g.178055283_178055291del, NC_000005.10:g.178055284_178055291del, NC_000005.10:g.178055285_178055291del, NC_000005.10:g.178055286_178055291del, NC_000005.10:g.178055287_178055291del, NC_000005.10:g.178055288_178055291del, NC_000005.10:g.178055289_178055291del, NC_000005.10:g.178055290_178055291del, NC_000005.10:g.178055291del, NC_000005.10:g.178055291dup, NC_000005.10:g.178055290_178055291dup, NC_000005.10:g.178055289_178055291dup, NC_000005.10:g.178055288_178055291dup, NC_000005.10:g.178055286_178055291dup, NC_000005.9:g.177482284_177482292del, NC_000005.9:g.177482285_177482292del, NC_000005.9:g.177482286_177482292del, NC_000005.9:g.177482287_177482292del, NC_000005.9:g.177482288_177482292del, NC_000005.9:g.177482289_177482292del, NC_000005.9:g.177482290_177482292del, NC_000005.9:g.177482291_177482292del, NC_000005.9:g.177482292del, NC_000005.9:g.177482292dup, NC_000005.9:g.177482291_177482292dup, NC_000005.9:g.177482290_177482292dup, NC_000005.9:g.177482289_177482292dup, NC_000005.9:g.177482287_177482292dup
5.
rs1491410256 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CT
[Show Flanks]
- Chromosome:
- 5:178063946
(GRCh38)
5:177490948
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178063946:T:TCT
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCT=0./0
(
ALFA)
TC=0.0002/3
(TOMMO)
- HGVS:
6.
rs1491406491 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 5:178005328
(GRCh38)
5:177432329
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178005327:TA:
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.00003/4
(GnomAD)
- HGVS:
7.
rs1491345403 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->C
[Show Flanks]
- Chromosome:
- 5:178042662
(GRCh38)
5:177469664
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178042662::C
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
- HGVS:
9.
rs1491273906 has merged into rs71274706 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTT>-,TT,TTT,TTTTT,TTTTTT,TTTTTTT
[Show Flanks]
- Chromosome:
- 5:178030861
(GRCh38)
5:177457862
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:178030849:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000005.10:g.178030861_178030864del, NC_000005.10:g.178030863_178030864del, NC_000005.10:g.178030864del, NC_000005.10:g.178030864dup, NC_000005.10:g.178030863_178030864dup, NC_000005.10:g.178030862_178030864dup, NC_000005.9:g.177457862_177457865del, NC_000005.9:g.177457864_177457865del, NC_000005.9:g.177457865del, NC_000005.9:g.177457865dup, NC_000005.9:g.177457864_177457865dup, NC_000005.9:g.177457863_177457865dup
10.
rs1491269780 has merged into rs145766403 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 5:178063959
(GRCh38)
5:177490960
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000005.10:g.178063959_178063973del, NC_000005.10:g.178063960_178063973del, NC_000005.10:g.178063961_178063973del, NC_000005.10:g.178063962_178063973del, NC_000005.10:g.178063963_178063973del, NC_000005.10:g.178063964_178063973del, NC_000005.10:g.178063965_178063973del, NC_000005.10:g.178063966_178063973del, NC_000005.10:g.178063967_178063973del, NC_000005.10:g.178063968_178063973del, NC_000005.10:g.178063969_178063973del, NC_000005.10:g.178063970_178063973del, NC_000005.10:g.178063971_178063973del, NC_000005.10:g.178063972_178063973del, NC_000005.10:g.178063973del, NC_000005.10:g.178063973dup, NC_000005.10:g.178063972_178063973dup, NC_000005.10:g.178063971_178063973dup, NC_000005.10:g.178063970_178063973dup, NC_000005.10:g.178063969_178063973dup, NC_000005.10:g.178063968_178063973dup, NC_000005.10:g.178063967_178063973dup, NC_000005.10:g.178063966_178063973dup, NC_000005.10:g.178063965_178063973dup, NC_000005.10:g.178063964_178063973dup, NC_000005.10:g.178063963_178063973dup, NC_000005.10:g.178063962_178063973dup, NC_000005.10:g.178063960_178063973dup, NC_000005.10:g.178063958_178063973dup, NC_000005.10:g.178063957_178063973dup, NC_000005.10:g.178063956_178063973dup, NC_000005.10:g.178063954_178063973dup, NC_000005.10:g.178063952_178063973dup, NC_000005.9:g.177490960_177490974del, NC_000005.9:g.177490961_177490974del, NC_000005.9:g.177490962_177490974del, NC_000005.9:g.177490963_177490974del, NC_000005.9:g.177490964_177490974del, NC_000005.9:g.177490965_177490974del, NC_000005.9:g.177490966_177490974del, NC_000005.9:g.177490967_177490974del, NC_000005.9:g.177490968_177490974del, NC_000005.9:g.177490969_177490974del, NC_000005.9:g.177490970_177490974del, NC_000005.9:g.177490971_177490974del, NC_000005.9:g.177490972_177490974del, NC_000005.9:g.177490973_177490974del, NC_000005.9:g.177490974del, NC_000005.9:g.177490974dup, NC_000005.9:g.177490973_177490974dup, NC_000005.9:g.177490972_177490974dup, NC_000005.9:g.177490971_177490974dup, NC_000005.9:g.177490970_177490974dup, NC_000005.9:g.177490969_177490974dup, NC_000005.9:g.177490968_177490974dup, NC_000005.9:g.177490967_177490974dup, NC_000005.9:g.177490966_177490974dup, NC_000005.9:g.177490965_177490974dup, NC_000005.9:g.177490964_177490974dup, NC_000005.9:g.177490963_177490974dup, NC_000005.9:g.177490961_177490974dup, NC_000005.9:g.177490959_177490974dup, NC_000005.9:g.177490958_177490974dup, NC_000005.9:g.177490957_177490974dup, NC_000005.9:g.177490955_177490974dup, NC_000005.9:g.177490953_177490974dup
11.
rs1491259833 has merged into rs1225834034 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAA>-,AA,AAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 5:178042672
(GRCh38)
5:177469673
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178042661:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000005.10:g.178042672_178042680del, NC_000005.10:g.178042674_178042680del, NC_000005.10:g.178042675_178042680del, NC_000005.10:g.178042677_178042680del, NC_000005.10:g.178042678_178042680del, NC_000005.10:g.178042679_178042680del, NC_000005.10:g.178042680del, NC_000005.10:g.178042680dup, NC_000005.10:g.178042679_178042680dup, NC_000005.10:g.178042678_178042680dup, NC_000005.10:g.178042677_178042680dup, NC_000005.10:g.178042674_178042680dup, NC_000005.9:g.177469673_177469681del, NC_000005.9:g.177469675_177469681del, NC_000005.9:g.177469676_177469681del, NC_000005.9:g.177469678_177469681del, NC_000005.9:g.177469679_177469681del, NC_000005.9:g.177469680_177469681del, NC_000005.9:g.177469681del, NC_000005.9:g.177469681dup, NC_000005.9:g.177469680_177469681dup, NC_000005.9:g.177469679_177469681dup, NC_000005.9:g.177469678_177469681dup, NC_000005.9:g.177469675_177469681dup
12.
rs1491197450 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GAAA
[Show Flanks]
- Chromosome:
- 5:178008121
(GRCh38)
5:177435123
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178008121:AAA:AAAGAAA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAGAAA=0.00034/4
(
ALFA)
AAAG=0.00043/42
(GnomAD)
- HGVS:
13.
rs1491153080 has merged into rs57135189 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 5:178023526
(GRCh38)
5:177450527
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000005.10:178023514:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000005.10:g.178023526_178023536del, NC_000005.10:g.178023527_178023536del, NC_000005.10:g.178023529_178023536del, NC_000005.10:g.178023530_178023536del, NC_000005.10:g.178023531_178023536del, NC_000005.10:g.178023532_178023536del, NC_000005.10:g.178023535_178023536del, NC_000005.10:g.178023536del, NC_000005.10:g.178023536dup, NC_000005.10:g.178023535_178023536dup, NC_000005.10:g.178023534_178023536dup, NC_000005.10:g.178023533_178023536dup, NC_000005.10:g.178023532_178023536dup, NC_000005.10:g.178023531_178023536dup, NC_000005.10:g.178023530_178023536dup, NC_000005.10:g.178023529_178023536dup, NC_000005.9:g.177450527_177450537del, NC_000005.9:g.177450528_177450537del, NC_000005.9:g.177450530_177450537del, NC_000005.9:g.177450531_177450537del, NC_000005.9:g.177450532_177450537del, NC_000005.9:g.177450533_177450537del, NC_000005.9:g.177450536_177450537del, NC_000005.9:g.177450537del, NC_000005.9:g.177450537dup, NC_000005.9:g.177450536_177450537dup, NC_000005.9:g.177450535_177450537dup, NC_000005.9:g.177450534_177450537dup, NC_000005.9:g.177450533_177450537dup, NC_000005.9:g.177450532_177450537dup, NC_000005.9:g.177450531_177450537dup, NC_000005.9:g.177450530_177450537dup
14.
rs1491150592 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 5:178026661
(GRCh38)
5:177453663
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178026661:TTTTTT:TTTTTTT
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTTTTTT=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
15.
rs1491095203 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 5:178055271
(GRCh38)
5:177482272
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178055270:CA:
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.00008/1
(
ALFA)
-=0.00243/9
(TWINSUK)
-=0.00311/12
(ALSPAC)
- HGVS:
16.
rs1491072415 has merged into rs58692527 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAGAGAGAGA>-,GA,GAGA,GAGAGA,GAGAGAGA,GAGAGAGAGAGA,GAGAGAGAGAGAGA,GAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGA,GAGAGAGAGAGAGAGAGAGAGAGAGAGA
[Show Flanks]
- Chromosome:
- 5:178062877
(GRCh38)
5:177489878
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA,NC_000005.10:178062863:AGAGAGAGAGAGAGAGAGAGAGA:AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGAGAGAGAGA=0./0
(
ALFA)
- HGVS:
NC_000005.10:g.178062865GA[6], NC_000005.10:g.178062865GA[7], NC_000005.10:g.178062865GA[8], NC_000005.10:g.178062865GA[9], NC_000005.10:g.178062865GA[10], NC_000005.10:g.178062865GA[12], NC_000005.10:g.178062865GA[13], NC_000005.10:g.178062865GA[14], NC_000005.10:g.178062865GA[15], NC_000005.10:g.178062865GA[16], NC_000005.10:g.178062865GA[17], NC_000005.10:g.178062865GA[18], NC_000005.10:g.178062865GA[19], NC_000005.10:g.178062865GA[20], NC_000005.9:g.177489866GA[6], NC_000005.9:g.177489866GA[7], NC_000005.9:g.177489866GA[8], NC_000005.9:g.177489866GA[9], NC_000005.9:g.177489866GA[10], NC_000005.9:g.177489866GA[12], NC_000005.9:g.177489866GA[13], NC_000005.9:g.177489866GA[14], NC_000005.9:g.177489866GA[15], NC_000005.9:g.177489866GA[16], NC_000005.9:g.177489866GA[17], NC_000005.9:g.177489866GA[18], NC_000005.9:g.177489866GA[19], NC_000005.9:g.177489866GA[20]
17.
rs1490885464 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 5:178028738
(GRCh38)
5:177455739
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178028737:T:G
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000014/2
(GnomAD)
- HGVS:
18.
rs1490857125 has merged into rs145766403 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 5:178063959
(GRCh38)
5:177490960
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000005.10:178063945:TTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000005.10:g.178063959_178063973del, NC_000005.10:g.178063960_178063973del, NC_000005.10:g.178063961_178063973del, NC_000005.10:g.178063962_178063973del, NC_000005.10:g.178063963_178063973del, NC_000005.10:g.178063964_178063973del, NC_000005.10:g.178063965_178063973del, NC_000005.10:g.178063966_178063973del, NC_000005.10:g.178063967_178063973del, NC_000005.10:g.178063968_178063973del, NC_000005.10:g.178063969_178063973del, NC_000005.10:g.178063970_178063973del, NC_000005.10:g.178063971_178063973del, NC_000005.10:g.178063972_178063973del, NC_000005.10:g.178063973del, NC_000005.10:g.178063973dup, NC_000005.10:g.178063972_178063973dup, NC_000005.10:g.178063971_178063973dup, NC_000005.10:g.178063970_178063973dup, NC_000005.10:g.178063969_178063973dup, NC_000005.10:g.178063968_178063973dup, NC_000005.10:g.178063967_178063973dup, NC_000005.10:g.178063966_178063973dup, NC_000005.10:g.178063965_178063973dup, NC_000005.10:g.178063964_178063973dup, NC_000005.10:g.178063963_178063973dup, NC_000005.10:g.178063962_178063973dup, NC_000005.10:g.178063960_178063973dup, NC_000005.10:g.178063958_178063973dup, NC_000005.10:g.178063957_178063973dup, NC_000005.10:g.178063956_178063973dup, NC_000005.10:g.178063954_178063973dup, NC_000005.10:g.178063952_178063973dup, NC_000005.9:g.177490960_177490974del, NC_000005.9:g.177490961_177490974del, NC_000005.9:g.177490962_177490974del, NC_000005.9:g.177490963_177490974del, NC_000005.9:g.177490964_177490974del, NC_000005.9:g.177490965_177490974del, NC_000005.9:g.177490966_177490974del, NC_000005.9:g.177490967_177490974del, NC_000005.9:g.177490968_177490974del, NC_000005.9:g.177490969_177490974del, NC_000005.9:g.177490970_177490974del, NC_000005.9:g.177490971_177490974del, NC_000005.9:g.177490972_177490974del, NC_000005.9:g.177490973_177490974del, NC_000005.9:g.177490974del, NC_000005.9:g.177490974dup, NC_000005.9:g.177490973_177490974dup, NC_000005.9:g.177490972_177490974dup, NC_000005.9:g.177490971_177490974dup, NC_000005.9:g.177490970_177490974dup, NC_000005.9:g.177490969_177490974dup, NC_000005.9:g.177490968_177490974dup, NC_000005.9:g.177490967_177490974dup, NC_000005.9:g.177490966_177490974dup, NC_000005.9:g.177490965_177490974dup, NC_000005.9:g.177490964_177490974dup, NC_000005.9:g.177490963_177490974dup, NC_000005.9:g.177490961_177490974dup, NC_000005.9:g.177490959_177490974dup, NC_000005.9:g.177490958_177490974dup, NC_000005.9:g.177490957_177490974dup, NC_000005.9:g.177490955_177490974dup, NC_000005.9:g.177490953_177490974dup
19.
rs1490821216 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 5:178035125
(GRCh38)
5:177462126
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178035124:T:C
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
20.
rs1490796454 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 5:178008346
(GRCh38)
5:177435347
(GRCh37)
- Canonical SPDI:
- NC_000005.10:178008345:T:C
- Gene:
- FAM153CP (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000019/5
(TOPMED)
- HGVS: