Links from Gene
Items: 1 to 20 of 1000
1.
rs1491588049 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 11:62870852
(GRCh38)
11:62638324
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62870851:AA:
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.00195/6
(ExAC)
-=0.00232/31
(GnomAD_exomes)
-=0.04042/674
(TOMMO)
-=0.04833/29
(NorthernSweden)
-=0.05/2
(GENOME_DK)
-=0.06799/6420
(GnomAD)
- HGVS:
2.
rs1491579714 has merged into rs56758000 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 11:62867330
(GRCh38)
11:62634802
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000011.10:62867322:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTT=0./0
(
ALFA)
T=0./0
(GENOME_DK)
-=0.1902/733
(ALSPAC)
- HGVS:
NC_000011.10:g.62867330_62867344del, NC_000011.10:g.62867331_62867344del, NC_000011.10:g.62867332_62867344del, NC_000011.10:g.62867333_62867344del, NC_000011.10:g.62867334_62867344del, NC_000011.10:g.62867335_62867344del, NC_000011.10:g.62867336_62867344del, NC_000011.10:g.62867337_62867344del, NC_000011.10:g.62867338_62867344del, NC_000011.10:g.62867339_62867344del, NC_000011.10:g.62867340_62867344del, NC_000011.10:g.62867341_62867344del, NC_000011.10:g.62867342_62867344del, NC_000011.10:g.62867343_62867344del, NC_000011.10:g.62867344del, NC_000011.10:g.62867344dup, NC_000011.10:g.62867343_62867344dup, NC_000011.10:g.62867342_62867344dup, NC_000011.10:g.62867341_62867344dup, NC_000011.10:g.62867340_62867344dup, NC_000011.10:g.62867339_62867344dup, NC_000011.10:g.62867338_62867344dup, NC_000011.10:g.62867337_62867344dup, NC_000011.10:g.62867336_62867344dup, NC_000011.10:g.62867335_62867344dup, NC_000011.10:g.62867334_62867344dup, NC_000011.10:g.62867333_62867344dup, NC_000011.10:g.62867332_62867344dup, NC_000011.10:g.62867331_62867344dup, NC_000011.10:g.62867330_62867344dup, NC_000011.10:g.62867329_62867344dup, NC_000011.10:g.62867328_62867344dup, NC_000011.10:g.62867326_62867344dup, NC_000011.10:g.62867323_62867344dup, NC_000011.10:g.62867344_62867345insTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.10:g.62867344_62867345insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.10:g.62867344_62867345insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.10:g.62867344_62867345insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.62634802_62634816del, NC_000011.9:g.62634803_62634816del, NC_000011.9:g.62634804_62634816del, NC_000011.9:g.62634805_62634816del, NC_000011.9:g.62634806_62634816del, NC_000011.9:g.62634807_62634816del, NC_000011.9:g.62634808_62634816del, NC_000011.9:g.62634809_62634816del, NC_000011.9:g.62634810_62634816del, NC_000011.9:g.62634811_62634816del, NC_000011.9:g.62634812_62634816del, NC_000011.9:g.62634813_62634816del, NC_000011.9:g.62634814_62634816del, NC_000011.9:g.62634815_62634816del, NC_000011.9:g.62634816del, NC_000011.9:g.62634816dup, NC_000011.9:g.62634815_62634816dup, NC_000011.9:g.62634814_62634816dup, NC_000011.9:g.62634813_62634816dup, NC_000011.9:g.62634812_62634816dup, NC_000011.9:g.62634811_62634816dup, NC_000011.9:g.62634810_62634816dup, NC_000011.9:g.62634809_62634816dup, NC_000011.9:g.62634808_62634816dup, NC_000011.9:g.62634807_62634816dup, NC_000011.9:g.62634806_62634816dup, NC_000011.9:g.62634805_62634816dup, NC_000011.9:g.62634804_62634816dup, NC_000011.9:g.62634803_62634816dup, NC_000011.9:g.62634802_62634816dup, NC_000011.9:g.62634801_62634816dup, NC_000011.9:g.62634800_62634816dup, NC_000011.9:g.62634798_62634816dup, NC_000011.9:g.62634795_62634816dup, NC_000011.9:g.62634816_62634817insTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.62634816_62634817insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.62634816_62634817insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000011.9:g.62634816_62634817insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
4.
rs1491532246 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 11:62854362
(GRCh38)
11:62621835
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62854362:GGGG:GGGGG
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD31 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD22 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGG=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
G=0.000029/4
(GnomAD)
- HGVS:
5.
rs1491521324 has merged into rs35320203 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 11:62865574
(GRCh38)
11:62633046
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000011.10:62865561:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
NC_000011.10:g.62865574_62865583del, NC_000011.10:g.62865577_62865583del, NC_000011.10:g.62865578_62865583del, NC_000011.10:g.62865579_62865583del, NC_000011.10:g.62865580_62865583del, NC_000011.10:g.62865581_62865583del, NC_000011.10:g.62865582_62865583del, NC_000011.10:g.62865583del, NC_000011.10:g.62865583dup, NC_000011.10:g.62865582_62865583dup, NC_000011.10:g.62865581_62865583dup, NC_000011.10:g.62865580_62865583dup, NC_000011.10:g.62865579_62865583dup, NC_000011.10:g.62865578_62865583dup, NC_000011.10:g.62865572_62865583dup, NC_000011.9:g.62633046_62633055del, NC_000011.9:g.62633049_62633055del, NC_000011.9:g.62633050_62633055del, NC_000011.9:g.62633051_62633055del, NC_000011.9:g.62633052_62633055del, NC_000011.9:g.62633053_62633055del, NC_000011.9:g.62633054_62633055del, NC_000011.9:g.62633055del, NC_000011.9:g.62633055dup, NC_000011.9:g.62633054_62633055dup, NC_000011.9:g.62633053_62633055dup, NC_000011.9:g.62633052_62633055dup, NC_000011.9:g.62633051_62633055dup, NC_000011.9:g.62633050_62633055dup, NC_000011.9:g.62633044_62633055dup
7.
rs1491427490 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 11:62854362
(GRCh38)
11:62621834
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62854361:AG:
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD31 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD22 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
-=0.00005/7
(GnomAD)
- HGVS:
8.
rs1491419177 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 11:62870843
(GRCh38)
11:62638315
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62870842:AA:
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.00062/9
(TOMMO)
-=0.01847/1081
(GnomAD)
- HGVS:
12.
rs1491261517 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GG
[Show Flanks]
- Chromosome:
- 11:62854252
(GRCh38)
11:62621725
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62854252:GGGG:GGGGGG
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD31 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD22 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGG=0./0
(
ALFA)
GG=0.000008/2
(TOPMED)
GG=0.000021/3
(GnomAD)
- HGVS:
14.
rs1491152201 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 11:62854252
(GRCh38)
11:62621724
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62854251:AG:
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD31 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD22 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000011/3
(TOPMED)
-=0.000014/2
(GnomAD)
- HGVS:
15.
rs1490872341 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 11:62883411
(GRCh38)
11:62650883
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62883410:G:A
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
16.
rs1490617904 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A
[Show Flanks]
- Chromosome:
- 11:62875122
(GRCh38)
11:62642594
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62875121:T:A
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000023/6
(TOPMED)
- HGVS:
17.
rs1490433174 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 11:62855498
(GRCh38)
11:62622970
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62855497:C:G
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD27 (Varview), SNORD26 (Varview), SNORD25 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000071/1
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000021/3
(GnomAD)
- HGVS:
18.
rs1490408231 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 11:62876338
(GRCh38)
11:62643810
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62876337:T:G
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000011/3
(TOPMED)
- HGVS:
19.
rs1490392068 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 11:62855315
(GRCh38)
11:62622787
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62855314:T:C
- Gene:
- SLC3A2 (Varview), SNORD29 (Varview), SNORD31 (Varview), SNORD30 (Varview), SNORD28 (Varview), SNORD27 (Varview), SNORD26 (Varview), SNORD25 (Varview), SNHG1 (Varview), LOC124900306 (Varview)
- Functional Consequence:
- upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency
- MAF:
C=0.000004/1
(GnomAD_exomes)
- HGVS:
20.
rs1490255187 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G,T
[Show Flanks]
- Chromosome:
- 11:62888504
(GRCh38)
11:62655976
(GRCh37)
- Canonical SPDI:
- NC_000011.10:62888503:C:G,NC_000011.10:62888503:C:T
- Gene:
- SLC3A2 (Varview)
- Functional Consequence:
- non_coding_transcript_variant,missense_variant,coding_sequence_variant,synonymous_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
G=0.000004/1
(GnomAD_exomes)
T=0.000004/1
(TOPMED)
- HGVS:
NC_000011.10:g.62888504C>G, NC_000011.10:g.62888504C>T, NC_000011.9:g.62655976C>G, NC_000011.9:g.62655976C>T, NM_002394.6:c.1704C>G, NM_002394.6:c.1704C>T, NM_002394.5:c.1704C>G, NM_002394.5:c.1704C>T, NM_001012662.3:c.1707C>G, NM_001012662.3:c.1707C>T, NM_001012662.2:c.1707C>G, NM_001012662.2:c.1707C>T, NM_001012664.3:c.1518C>G, NM_001012664.3:c.1518C>T, NM_001012664.2:c.1518C>G, NM_001012664.2:c.1518C>T, NM_001013251.3:c.1401C>G, NM_001013251.3:c.1401C>T, NM_001013251.2:c.1401C>G, NM_001013251.2:c.1401C>T, NR_037193.2:n.1295C>G, NR_037193.2:n.1295C>T, NR_037193.1:n.1295C>G, NR_037193.1:n.1295C>T, NM_001012661.1:c.1797C>G, NM_001012661.1:c.1797C>T, NM_001012663.1:c.1611C>G, NM_001012663.1:c.1611C>T, NP_002385.3:p.Asn568Lys, NP_001012680.1:p.Asn569Lys, NP_001012682.1:p.Asn506Lys, NP_001013269.1:p.Asn467Lys