SNP Links for Gene (Select 646282) - SNP

Links from Gene

Items: 1 to 20 of 1423

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Select item 14909387231.

rs1490938723 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:99979197 (GRCh38)
7:99576820 (GRCh37)
Canonical SPDI:: NC_000007.14:99979196:A:G
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.99979197A>G, NC_000007.13:g.99576820A>G

Select item 14902544552.

rs1490254455 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:99984691 (GRCh38)
7:99582314 (GRCh37)
Canonical SPDI:: NC_000007.14:99984690:A:G
Gene:: AZGP1P1 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000007.14:g.99984691A>G, NC_000007.13:g.99582314A>G

Select item 14901248253.

rs1490124825 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:99978853 (GRCh38)
7:99576476 (GRCh37)
Canonical SPDI:: NC_000007.14:99978852:A:G
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.99978853A>G, NC_000007.13:g.99576476A>G

Select item 14891445214.

rs1489144521 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 7:99981073 (GRCh38)
7:99578696 (GRCh37)
Canonical SPDI:: NC_000007.14:99981072:CT:
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.99981073_99981074del, NC_000007.13:g.99578696_99578697del

Select item 14889718135.

rs1488971813 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:99979034 (GRCh38)
7:99576657 (GRCh37)
Canonical SPDI:: NC_000007.14:99979033:C:T
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000026/7 (TOPMED)
T=0.000043/6 (GnomAD)
HGVS:: NC_000007.14:g.99979034C>T, NC_000007.13:g.99576657C>T

Select item 14885220716.

rs1488522071 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:99979690 (GRCh38)
7:99577313 (GRCh37)
Canonical SPDI:: NC_000007.14:99979689:G:A
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.99979690G>A, NC_000007.13:g.99577313G>A

Select item 14884894447.

rs1488489444 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:99981344 (GRCh38)
7:99578967 (GRCh37)
Canonical SPDI:: NC_000007.14:99981343:C:T
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000342/1 (KOREAN)
HGVS:: NC_000007.14:g.99981344C>T, NC_000007.13:g.99578967C>T

Select item 14882028758.

rs1488202875 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:99978819 (GRCh38)
7:99576442 (GRCh37)
Canonical SPDI:: NC_000007.14:99978818:A:G
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000007.14:g.99978819A>G, NC_000007.13:g.99576442A>G

Select item 14873282929.

rs1487328292 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:99984067 (GRCh38)
7:99581690 (GRCh37)
Canonical SPDI:: NC_000007.14:99984066:G:A
Gene:: AZGP1P1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.99984067G>A, NC_000007.13:g.99581690G>A, NR_036679.1:n.1011G>A

Select item 148615877710.

rs1486158777 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:99983110 (GRCh38)
7:99580733 (GRCh37)
Canonical SPDI:: NC_000007.14:99983109:T:C
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.99983110T>C, NC_000007.13:g.99580733T>C

Select item 148614723711.

rs1486147237 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:99983993 (GRCh38)
7:99581616 (GRCh37)
Canonical SPDI:: NC_000007.14:99983992:T:C
Gene:: AZGP1P1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.99983993T>C, NC_000007.13:g.99581616T>C, NR_036679.1:n.937T>C

Select item 148584233712.

rs1485842337 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:99982244 (GRCh38)
7:99579867 (GRCh37)
Canonical SPDI:: NC_000007.14:99982243:C:T
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000224/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.99982244C>T, NC_000007.13:g.99579867C>T

Select item 148570834313.

rs1485708343 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:99980669 (GRCh38)
7:99578292 (GRCh37)
Canonical SPDI:: NC_000007.14:99980668:G:A
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000007.14:g.99980669G>A, NC_000007.13:g.99578292G>A

Select item 148554652614.

rs1485546526 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:99980768 (GRCh38)
7:99578391 (GRCh37)
Canonical SPDI:: NC_000007.14:99980767:A:C
Gene:: AZGP1P1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/2 (GnomAD_exomes)
C=0.000014/2 (GnomAD)
HGVS:: NC_000007.14:g.99980768A>C, NC_000007.13:g.99578391A>C, NR_036679.1:n.7A>C

Select item 148554200915.

rs1485542009 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 7:99982031 (GRCh38)
7:99579654 (GRCh37)
Canonical SPDI:: NC_000007.14:99982030:A:T
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.99982031A>T, NC_000007.13:g.99579654A>T

Select item 148525224516.

rs1485252245 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>A
Chromosome:: no mapping
Canonical SPDI:

Select item 148463097217.

rs1484630972 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 7:99982145 (GRCh38)
7:99579768 (GRCh37)
Canonical SPDI:: NC_000007.14:99982144:G:C
Gene:: AZGP1P1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000007.14:g.99982145G>C, NC_000007.13:g.99579768G>C

Select item 148435055518.

rs1484350555 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:99984086 (GRCh38)
7:99581709 (GRCh37)
Canonical SPDI:: NC_000007.14:99984085:C:T
Gene:: AZGP1P1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.99984086C>T, NC_000007.13:g.99581709C>T, NR_036679.1:n.1030C>T

Select item 148314500619.

rs1483145006 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 7:99979964 (GRCh38)
7:99577587 (GRCh37)
Canonical SPDI:: NC_000007.14:99979963:C:G
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.99979964C>G, NC_000007.13:g.99577587C>G

Select item 148274334420.

rs1482743344 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 7:99979430 (GRCh38)
7:99577053 (GRCh37)
Canonical SPDI:: NC_000007.14:99979429:T:A,NC_000007.14:99979429:T:C
Gene:: AZGP1P1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000029/4 (GnomAD)
C=0.00003/8 (TOPMED)
HGVS:: NC_000007.14:g.99979430T>A, NC_000007.14:g.99979430T>C, NC_000007.13:g.99577053T>A, NC_000007.13:g.99577053T>C

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