SNP Links for Gene (Select 645752) - SNP

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Items: 1 to 20 of 4035

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Select item 14909219991.

rs1490921999 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:77921971 (GRCh38)
15:78214313 (GRCh37)
Canonical SPDI:: NC_000015.10:77921970:C:A,NC_000015.10:77921970:C:T
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.77921971C>A, NC_000015.10:g.77921971C>T, NC_000015.9:g.78214313C>A, NC_000015.9:g.78214313C>T

Select item 14908966782.

rs1490896678 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 15:77922871 (GRCh38)
15:78215213 (GRCh37)
Canonical SPDI:: NC_000015.10:77922870:GGGG:GGG
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GGG=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.77922874del, NC_000015.9:g.78215216del

Select item 14907182243.

rs1490718224 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77922105 (GRCh38)
15:78214447 (GRCh37)
Canonical SPDI:: NC_000015.10:77922104:G:A
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.77922105G>A, NC_000015.9:g.78214447G>A

Select item 14905620924.

rs1490562092 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77915168 (GRCh38)
15:78207510 (GRCh37)
Canonical SPDI:: NC_000015.10:77915167:G:A
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.77915168G>A, NC_000015.9:g.78207510G>A, NR_027024.1:n.2166C>T

Select item 14904045995.

rs1490404599 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77923210 (GRCh38)
15:78215552 (GRCh37)
Canonical SPDI:: NC_000015.10:77923209:G:A
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.77923210G>A, NC_000015.9:g.78215552G>A

Select item 14902166796.

rs1490216679 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:77923202 (GRCh38)
15:78215544 (GRCh37)
Canonical SPDI:: NC_000015.10:77923201:C:T
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000078/11 (GnomAD)
HGVS:: NC_000015.10:g.77923202C>T, NC_000015.9:g.78215544C>T

Select item 14898427397.

rs1489842739 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:77924430 (GRCh38)
15:78216772 (GRCh37)
Canonical SPDI:: NC_000015.10:77924429:T:C
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.77924430T>C, NC_000015.9:g.78216772T>C

Select item 14897788138.

rs1489778813 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77924504 (GRCh38)
15:78216846 (GRCh37)
Canonical SPDI:: NC_000015.10:77924503:G:A
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.77924504G>A, NC_000015.9:g.78216846G>A

Select item 14897770019.

rs1489777001 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:77920403 (GRCh38)
15:78212745 (GRCh37)
Canonical SPDI:: NC_000015.10:77920402:A:C
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.77920403A>C, NC_000015.9:g.78212745A>C

Select item 148968470510.

rs1489684705 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:77920508 (GRCh38)
15:78212850 (GRCh37)
Canonical SPDI:: NC_000015.10:77920507:G:C
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.77920508G>C, NC_000015.9:g.78212850G>C

Select item 148965854911.

rs1489658549 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77922341 (GRCh38)
15:78214683 (GRCh37)
Canonical SPDI:: NC_000015.10:77922340:G:A
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000117/31 (TOPMED)
A=0.000157/22 (GnomAD)
HGVS:: NC_000015.10:g.77922341G>A, NC_000015.9:g.78214683G>A

Select item 148946055612.

rs1489460556 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77917691 (GRCh38)
15:78210033 (GRCh37)
Canonical SPDI:: NC_000015.10:77917690:G:A
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000015.10:g.77917691G>A, NC_000015.9:g.78210033G>A

Select item 148920741613.

rs1489207416 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77914746 (GRCh38)
15:78207088 (GRCh37)
Canonical SPDI:: NC_000015.10:77914745:C:G
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.77914746C>G, NC_000015.9:g.78207088C>G, NR_027024.1:n.2588G>C

Select item 148869463114.

rs1488694631 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:77926518 (GRCh38)
15:78218860 (GRCh37)
Canonical SPDI:: NC_000015.10:77926517:G:A
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.77926518G>A, NC_000015.9:g.78218860G>A

Select item 148869114415.

rs1488691144 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:77922519 (GRCh38)
15:78214861 (GRCh37)
Canonical SPDI:: NC_000015.10:77922518:A:C
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000015.10:g.77922519A>C, NC_000015.9:g.78214861A>C

Select item 148855339416.

rs1488553394 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77918068 (GRCh38)
15:78210410 (GRCh37)
Canonical SPDI:: NC_000015.10:77918067:C:G
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.77918068C>G, NC_000015.9:g.78210410C>G

Select item 148843997717.

rs1488439977 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77924931 (GRCh38)
15:78217273 (GRCh37)
Canonical SPDI:: NC_000015.10:77924930:C:G
Gene:: GOLGA6FP (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.77924931C>G, NC_000015.9:g.78217273C>G

Select item 148831643518.

rs1488316435 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77919641 (GRCh38)
15:78211983 (GRCh37)
Canonical SPDI:: NC_000015.10:77919640:C:G
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000198/3 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.77919641C>G, NC_000015.9:g.78211983C>G

Select item 148828344819.

rs1488283448 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77915719 (GRCh38)
15:78208061 (GRCh37)
Canonical SPDI:: NC_000015.10:77915718:C:G
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.77915719C>G, NC_000015.9:g.78208061C>G, NR_027024.1:n.1789G>C

Select item 148824744720.

rs1488247447 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 15:77915762 (GRCh38)
15:78208104 (GRCh37)
Canonical SPDI:: NC_000015.10:77915761:C:G
Gene:: GOLGA6FP (Varview), LOC124903533 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000015.10:g.77915762C>G, NC_000015.9:g.78208104C>G

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