SNP Links for Gene (Select 645355) - SNP

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Select item 14915636901.

rs1491563690 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 18:5785006 (GRCh38)
18:5785005 (GRCh37)
Canonical SPDI:: NC_000018.10:5785005:TA:
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00001/1 (GnomAD)
HGVS:: NC_000018.10:g.5785006_5785007del, NC_000018.9:g.5785005_5785006del

Select item 14914530452.

rs1491453045 has merged into rs34727160 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAA>-,A,AA,AAA,AAAA,AAAAAA,AAAAAAA [Show Flanks]
Chromosome:: 18:5783068 (GRCh38)
18:5783067 (GRCh37)
Canonical SPDI:: NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000018.10:5783057:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000018.10:g.5783068_5783072del, NC_000018.10:g.5783069_5783072del, NC_000018.10:g.5783070_5783072del, NC_000018.10:g.5783071_5783072del, NC_000018.10:g.5783072del, NC_000018.10:g.5783072dup, NC_000018.10:g.5783071_5783072dup, NC_000018.9:g.5783067_5783071del, NC_000018.9:g.5783068_5783071del, NC_000018.9:g.5783069_5783071del, NC_000018.9:g.5783070_5783071del, NC_000018.9:g.5783071del, NC_000018.9:g.5783071dup, NC_000018.9:g.5783070_5783071dup

Select item 14914124883.

rs1491412488 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 18:5748263 (GRCh38)
18:5748263 (GRCh37)
Canonical SPDI:: NC_000018.10:5748263::G
Gene:: MIR3976HG (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00004/2 (GnomAD)
HGVS:: NC_000018.10:g.5748263_5748264insG, NC_000018.9:g.5748262_5748263insG

Select item 14911560204.

rs1491156020 has merged into rs370345891 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 18:5785016 (GRCh38)
18:5785015 (GRCh37)
Canonical SPDI:: NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000018.10:5785006:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
-=0.000079/21 (TOPMED)
-=0.275/11 (GENOME_DK)
HGVS:: NC_000018.10:g.5785016_5785023del, NC_000018.10:g.5785018_5785023del, NC_000018.10:g.5785019_5785023del, NC_000018.10:g.5785020_5785023del, NC_000018.10:g.5785021_5785023del, NC_000018.10:g.5785022_5785023del, NC_000018.10:g.5785023del, NC_000018.10:g.5785023dup, NC_000018.10:g.5785022_5785023dup, NC_000018.10:g.5785021_5785023dup, NC_000018.10:g.5785020_5785023dup, NC_000018.10:g.5785019_5785023dup, NC_000018.10:g.5785017_5785023dup, NC_000018.10:g.5785016_5785023dup, NC_000018.10:g.5785015_5785023dup, NC_000018.10:g.5785014_5785023dup, NC_000018.10:g.5785013_5785023dup, NC_000018.10:g.5785012_5785023dup, NC_000018.10:g.5785011_5785023dup, NC_000018.10:g.5785007_5785023dup, NC_000018.10:g.5785023_5785024insAAAAAAAAAAAAAAAAAA, NC_000018.10:g.5785023_5785024insAAAAAAAAAAAAAAAAAAA, NC_000018.10:g.5785023_5785024insAAAAAAAAAAAAAAAAAAAA, NC_000018.10:g.5785023_5785024insAAAAAAAAAAAAAAAAAAAAA, NC_000018.9:g.5785015_5785022del, NC_000018.9:g.5785017_5785022del, NC_000018.9:g.5785018_5785022del, NC_000018.9:g.5785019_5785022del, NC_000018.9:g.5785020_5785022del, NC_000018.9:g.5785021_5785022del, NC_000018.9:g.5785022del, NC_000018.9:g.5785022dup, NC_000018.9:g.5785021_5785022dup, NC_000018.9:g.5785020_5785022dup, NC_000018.9:g.5785019_5785022dup, NC_000018.9:g.5785018_5785022dup, NC_000018.9:g.5785016_5785022dup, NC_000018.9:g.5785015_5785022dup, NC_000018.9:g.5785014_5785022dup, NC_000018.9:g.5785013_5785022dup, NC_000018.9:g.5785012_5785022dup, NC_000018.9:g.5785011_5785022dup, NC_000018.9:g.5785010_5785022dup, NC_000018.9:g.5785006_5785022dup, NC_000018.9:g.5785022_5785023insAAAAAAAAAAAAAAAAAA, NC_000018.9:g.5785022_5785023insAAAAAAAAAAAAAAAAAAA, NC_000018.9:g.5785022_5785023insAAAAAAAAAAAAAAAAAAAA, NC_000018.9:g.5785022_5785023insAAAAAAAAAAAAAAAAAAAAA

Select item 14910771705.

rs1491077170 has merged into rs557155872 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTTTT,TTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 18:5788699 (GRCh38)
18:5788698 (GRCh37)
Canonical SPDI:: NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000018.10:5788685:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTTTTTTTT=0./0 (ALFA)
-=0.12667/76 (NorthernSweden)
-=0.375/15 (GENOME_DK)
HGVS:: NC_000018.10:g.5788699_5788702del, NC_000018.10:g.5788700_5788702del, NC_000018.10:g.5788701_5788702del, NC_000018.10:g.5788702del, NC_000018.10:g.5788702dup, NC_000018.10:g.5788701_5788702dup, NC_000018.10:g.5788698_5788702dup, NC_000018.10:g.5788693_5788702dup, NC_000018.9:g.5788698_5788701del, NC_000018.9:g.5788699_5788701del, NC_000018.9:g.5788700_5788701del, NC_000018.9:g.5788701del, NC_000018.9:g.5788701dup, NC_000018.9:g.5788700_5788701dup, NC_000018.9:g.5788697_5788701dup, NC_000018.9:g.5788692_5788701dup

Select item 14909544076.

rs1490954407 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 18:5749463 (GRCh38)
18:5749462 (GRCh37)
Canonical SPDI:: NC_000018.10:5749462:C:G
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.5749463C>G, NC_000018.9:g.5749462C>G

Select item 14909485117.

rs1490948511 [Homo sapiens]

Variant type:: DELINS
Alleles:: GACTATATATAT>- [Show Flanks]
Chromosome:: 18:5779370 (GRCh38)
18:5779369 (GRCh37)
Canonical SPDI:: NC_000018.10:5779350:TATATATGACTATATATATGACTATATATAT:TATATATGACTATATATAT
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATGACTATATATAT=0.00059/7 (ALFA)
-=0.000774/107 (GnomAD)
-=0.000869/230 (TOPMED)
HGVS:: NC_000018.10:g.5779358GACTATATATAT[1], NC_000018.9:g.5779357GACTATATATAT[1]

Select item 14908977978.

rs1490897797 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:5750409 (GRCh38)
18:5750408 (GRCh37)
Canonical SPDI:: NC_000018.10:5750408:G:A
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000018.10:g.5750409G>A, NC_000018.9:g.5750408G>A

Select item 14908701109.

rs1490870110 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:5765285 (GRCh38)
18:5765284 (GRCh37)
Canonical SPDI:: NC_000018.10:5765284:G:A
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.5765285G>A, NC_000018.9:g.5765284G>A

Select item 149080328710.

rs1490803287 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 18:5778904 (GRCh38)
18:5778904 (GRCh37)
Canonical SPDI:: NC_000018.10:5778904:C:CC
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.5778905dup, NC_000018.9:g.5778904dup

Select item 149077277711.

rs1490772777 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 18:5779714 (GRCh38)
18:5779713 (GRCh37)
Canonical SPDI:: NC_000018.10:5779713:C:G
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.5779714C>G, NC_000018.9:g.5779713C>G

Select item 149074941012.

rs1490749410 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:5795504 (GRCh38)
18:5795503 (GRCh37)
Canonical SPDI:: NC_000018.10:5795503:T:C
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.5795504T>C, NC_000018.9:g.5795503T>C, NR_038839.1:n.1293T>C

Select item 149063405513.

rs1490634055 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:5771716 (GRCh38)
18:5771715 (GRCh37)
Canonical SPDI:: NC_000018.10:5771715:T:C
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.5771716T>C, NC_000018.9:g.5771715T>C

Select item 149060988914.

rs1490609889 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 18:5757988 (GRCh38)
18:5757987 (GRCh37)
Canonical SPDI:: NC_000018.10:5757987:AG:
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.000071/1 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000018.10:g.5757988_5757989del, NC_000018.9:g.5757987_5757988del

Select item 149056716415.

rs1490567164 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:5772622 (GRCh38)
18:5772621 (GRCh37)
Canonical SPDI:: NC_000018.10:5772621:T:C
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000018.10:g.5772622T>C, NC_000018.9:g.5772621T>C

Select item 149054969716.

rs1490549697 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 18:5787674 (GRCh38)
18:5787673 (GRCh37)
Canonical SPDI:: NC_000018.10:5787673:T:C
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.5787674T>C, NC_000018.9:g.5787673T>C

Select item 149052903017.

rs1490529030 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:5795197 (GRCh38)
18:5795196 (GRCh37)
Canonical SPDI:: NC_000018.10:5795196:A:G
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.5795197A>G, NC_000018.9:g.5795196A>G, NR_038839.1:n.986A>G

Select item 149042909018.

rs1490429090 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:5764894 (GRCh38)
18:5764893 (GRCh37)
Canonical SPDI:: NC_000018.10:5764893:A:G
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000018.10:g.5764894A>G, NC_000018.9:g.5764893A>G

Select item 149037884519.

rs1490378845 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAG>- [Show Flanks]
Chromosome:: 18:5765723 (GRCh38)
18:5765722 (GRCh37)
Canonical SPDI:: NC_000018.10:5765720:AGGAG:AG
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.5765723_5765725del, NC_000018.9:g.5765722_5765724del

Select item 149022510020.

rs1490225100 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:5761030 (GRCh38)
18:5761029 (GRCh37)
Canonical SPDI:: NC_000018.10:5761029:A:G
Gene:: MIR3976HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000018.10:g.5761030A>G, NC_000018.9:g.5761029A>G, NR_172498.1:n.209A>G

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