Links from Gene
Items: 1 to 20 of 1000
1.
rs1491576357 has merged into rs59266525 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAAAA>-,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:951186
(GRCh38)
17:854426
(GRCh37)
- Canonical SPDI:
- NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:951175:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAAAAAA=0./0
(
ALFA)
- HGVS:
NC_000017.11:g.951186_951203del, NC_000017.11:g.951195_951203del, NC_000017.11:g.951196_951203del, NC_000017.11:g.951197_951203del, NC_000017.11:g.951198_951203del, NC_000017.11:g.951199_951203del, NC_000017.11:g.951201_951203del, NC_000017.11:g.951202_951203del, NC_000017.11:g.951203del, NC_000017.11:g.951203dup, NC_000017.11:g.951202_951203dup, NC_000017.11:g.951201_951203dup, NC_000017.10:g.854426_854443del, NC_000017.10:g.854435_854443del, NC_000017.10:g.854436_854443del, NC_000017.10:g.854437_854443del, NC_000017.10:g.854438_854443del, NC_000017.10:g.854439_854443del, NC_000017.10:g.854441_854443del, NC_000017.10:g.854442_854443del, NC_000017.10:g.854443del, NC_000017.10:g.854443dup, NC_000017.10:g.854442_854443dup, NC_000017.10:g.854441_854443dup
2.
rs1491575386 has merged into rs59822805 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 17:909108
(GRCh38)
17:812348
(GRCh37)
- Canonical SPDI:
- NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:909098:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- NXN (Varview), LOC101927727 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAA=0./0
(
ALFA)
AAAAAAAAAAAAAAAA=0./0
(GENOME_DK)
AAAAAAAAAAAAAAAAA=0.0236/118
(1000Genomes)
- HGVS:
NC_000017.11:g.909108_909127del, NC_000017.11:g.909109_909127del, NC_000017.11:g.909110_909127del, NC_000017.11:g.909111_909127del, NC_000017.11:g.909112_909127del, NC_000017.11:g.909113_909127del, NC_000017.11:g.909114_909127del, NC_000017.11:g.909115_909127del, NC_000017.11:g.909116_909127del, NC_000017.11:g.909117_909127del, NC_000017.11:g.909118_909127del, NC_000017.11:g.909119_909127del, NC_000017.11:g.909120_909127del, NC_000017.11:g.909121_909127del, NC_000017.11:g.909122_909127del, NC_000017.11:g.909123_909127del, NC_000017.11:g.909124_909127del, NC_000017.11:g.909125_909127del, NC_000017.11:g.909126_909127del, NC_000017.11:g.909127del, NC_000017.11:g.909127dup, NC_000017.11:g.909126_909127dup, NC_000017.11:g.909125_909127dup, NC_000017.11:g.909124_909127dup, NC_000017.11:g.909123_909127dup, NC_000017.11:g.909122_909127dup, NC_000017.11:g.909121_909127dup, NC_000017.11:g.909120_909127dup, NC_000017.11:g.909119_909127dup, NC_000017.11:g.909118_909127dup, NC_000017.11:g.909117_909127dup, NC_000017.11:g.909116_909127dup, NC_000017.11:g.909115_909127dup, NC_000017.11:g.909114_909127dup, NC_000017.11:g.909112_909127dup, NC_000017.11:g.909111_909127dup, NC_000017.11:g.909099_909127dup, NC_000017.10:g.812348_812367del, NC_000017.10:g.812349_812367del, NC_000017.10:g.812350_812367del, NC_000017.10:g.812351_812367del, NC_000017.10:g.812352_812367del, NC_000017.10:g.812353_812367del, NC_000017.10:g.812354_812367del, NC_000017.10:g.812355_812367del, NC_000017.10:g.812356_812367del, NC_000017.10:g.812357_812367del, NC_000017.10:g.812358_812367del, NC_000017.10:g.812359_812367del, NC_000017.10:g.812360_812367del, NC_000017.10:g.812361_812367del, NC_000017.10:g.812362_812367del, NC_000017.10:g.812363_812367del, NC_000017.10:g.812364_812367del, NC_000017.10:g.812365_812367del, NC_000017.10:g.812366_812367del, NC_000017.10:g.812367del, NC_000017.10:g.812367dup, NC_000017.10:g.812366_812367dup, NC_000017.10:g.812365_812367dup, NC_000017.10:g.812364_812367dup, NC_000017.10:g.812363_812367dup, NC_000017.10:g.812362_812367dup, NC_000017.10:g.812361_812367dup, NC_000017.10:g.812360_812367dup, NC_000017.10:g.812359_812367dup, NC_000017.10:g.812358_812367dup, NC_000017.10:g.812357_812367dup, NC_000017.10:g.812356_812367dup, NC_000017.10:g.812355_812367dup, NC_000017.10:g.812354_812367dup, NC_000017.10:g.812352_812367dup, NC_000017.10:g.812351_812367dup, NC_000017.10:g.812339_812367dup
3.
rs1491556618 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 17:889749
(GRCh38)
17:792990
(GRCh37)
- Canonical SPDI:
- NC_000017.11:889749::G
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.00363/43
(
ALFA)
G=0.02202/579
(GnomAD)
- HGVS:
4.
rs1491531653 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GG>-
[Show Flanks]
- Chromosome:
- 17:963209
(GRCh38)
17:866449
(GRCh37)
- Canonical SPDI:
- NC_000017.11:963207:GGG:G
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0.000857/14
(
ALFA)
-=0.003126/14
(Estonian)
-=0.021446/2472
(GnomAD)
-=0.085572/548
(1000Genomes)
-=0.252201/4191
(TOMMO)
- HGVS:
5.
rs1491528474 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATATATATATATATATATATATATATATATATATATTTTTT,ATATATATATATATATATATATATATATATATT,ATATATATATATATATATATATATATATTTTTT,ATATATATATATATATATATATATATT,ATATATATATATATATATATATATATTT,ATATATATATATATATATATATATATTTT,ATATATATATATATATATATATATATTTTTT,ATATATATATATATATATATATATATTTTTTT,ATATATATATATATATATATATATT,ATATATATATATATATATATATATTTTT,ATATATATATATATATATATATT,ATATATATATATATATATATATTT,ATATATATATATATATATATATTTT,ATATATATATATATATATATT,ATATATATATATATATATATTT,ATATATATATATATATATATTTT,ATATATATATATATATATATTTTT,ATATATATATATATATATATTTTTT,ATATATATATATATATATT,ATATATATATATATATATTT,ATATATATATATATATATTTT,ATATATATATATATATATTTTT,ATATATATATATATATATTTTTT,ATATATATATATATATATTTTTTT,ATATATATATATATATATTTTTTTTTT,ATATATATATATATATT,ATATATATATATATATTT,ATATATATATATATATTTT,ATATATATATATATATTTTT,ATATATATATATATATTTTTT,ATATATATATATATT,ATATATATATATATTT,ATATATATATATATTTT,ATATATATATATATTTTT,ATATATATATATATTTTTT,ATATATATATATATTTTTTT,ATATATATATATATTTTTTTT,ATATATATATATT,ATATATATATATTT,ATATATATATATTTATATATATATATATATATATATTTTT,ATATATATATATTTT,ATATATATATATTTTT,ATATATATATATTTTTT,ATATATATATATTTTTTT,ATATATATATT,ATATATATATTT,ATATATATATTTT,ATATATATATTTTT,ATATATATATTTTTT,ATATATATATTTTTTT,ATATATATT,ATATATATTT,ATATATATTTT,ATATATATTTTT,ATATATATTTTTT,ATATATATTTTTTT,ATATATATTTTTTTT,ATATATATTTTTTTTT,ATATATT,ATATATTT,ATATATTTT,ATATATTTTT,ATATATTTTTT,ATATATTTTTTT,ATATATTTTTTTT,ATATATTTTTTTTTT,ATATT,ATATTT,ATATTTT,ATATTTTT,ATATTTTTT,ATATTTTTTT,ATATTTTTTTT,ATATTTTTTTTTT,ATT,ATTT,ATTTT,ATTTTT,ATTTTTT,ATTTTTTT,ATTTTTTTT,ATTTTTTTTTT
[Show Flanks]
- Chromosome:
- 17:853723
(GRCh38)
17:756964
(GRCh37)
- Canonical SPDI:
- NC_000017.11:853723:T:TATATATATATATATATATATATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATATATATATATATTTTTTT,NC_000017.11:853723:T:TATATATATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATATATTTTTTT,NC_000017.11:853723:T:TATATATATATATATATATTTTTTTTTT,NC_000017.11:853723:T:TATATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATT,NC_000017.11:853723:T:TATATATATATATATTT,NC_000017.11:853723:T:TATATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATATTTTTTT,NC_000017.11:853723:T:TATATATATATATATTTTTTTT,NC_000017.11:853723:T:TATATATATATATT,NC_000017.11:853723:T:TATATATATATATTT,NC_000017.11:853723:T:TATATATATATATTTATATATATATATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATTTT,NC_000017.11:853723:T:TATATATATATATTTTT,NC_000017.11:853723:T:TATATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATATTTTTTT,NC_000017.11:853723:T:TATATATATATT,NC_000017.11:853723:T:TATATATATATTT,NC_000017.11:853723:T:TATATATATATTTT,NC_000017.11:853723:T:TATATATATATTTTT,NC_000017.11:853723:T:TATATATATATTTTTT,NC_000017.11:853723:T:TATATATATATTTTTTT,NC_000017.11:853723:T:TATATATATT,NC_000017.11:853723:T:TATATATATTT,NC_000017.11:853723:T:TATATATATTTT,NC_000017.11:853723:T:TATATATATTTTT,NC_000017.11:853723:T:TATATATATTTTTT,NC_000017.11:853723:T:TATATATATTTTTTT,NC_000017.11:853723:T:TATATATATTTTTTTT,NC_000017.11:853723:T:TATATATATTTTTTTTT,NC_000017.11:853723:T:TATATATT,NC_000017.11:853723:T:TATATATTT,NC_000017.11:853723:T:TATATATTTT,NC_000017.11:853723:T:TATATATTTTT,NC_000017.11:853723:T:TATATATTTTTT,NC_000017.11:853723:T:TATATATTTTTTT,NC_000017.11:853723:T:TATATATTTTTTTT,NC_000017.11:853723:T:TATATATTTTTTTTTT,NC_000017.11:853723:T:TATATT,NC_000017.11:853723:T:TATATTT,NC_000017.11:853723:T:TATATTTT,NC_000017.11:853723:T:TATATTTTT,NC_000017.11:853723:T:TATATTTTTT,NC_000017.11:853723:T:TATATTTTTTT,NC_000017.11:853723:T:TATATTTTTTTT,NC_000017.11:853723:T:TATATTTTTTTTTT,NC_000017.11:853723:T:TATT,NC_000017.11:853723:T:TATTT,NC_000017.11:853723:T:TATTTT,NC_000017.11:853723:T:TATTTTT,NC_000017.11:853723:T:TATTTTTT,NC_000017.11:853723:T:TATTTTTTT,NC_000017.11:853723:T:TATTTTTTTT,NC_000017.11:853723:T:TATTTTTTTTTT
- Gene:
- NXN (Varview), LOC124903894 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATATATATATATATT=0./0
(
ALFA)
- HGVS:
NC_000017.11:g.853724TA[18]T[6], NC_000017.11:g.853724TA[16]TT[1], NC_000017.11:g.853724TA[14]T[6], NC_000017.11:g.853724TA[13]TT[1], NC_000017.11:g.853724TA[13]TTT[1], NC_000017.11:g.853724TA[13]T[4], NC_000017.11:g.853724TA[13]T[6], NC_000017.11:g.853724TA[13]T[7], NC_000017.11:g.853724TA[12]TT[1], NC_000017.11:g.853724TA[12]T[5], NC_000017.11:g.853724TA[11]TT[1], NC_000017.11:g.853724TA[11]TTT[1], NC_000017.11:g.853724TA[11]T[4], NC_000017.11:g.853724TA[10]TT[1], NC_000017.11:g.853724TA[10]TTT[1], NC_000017.11:g.853724TA[10]T[4], NC_000017.11:g.853724TA[10]T[5], NC_000017.11:g.853724TA[10]T[6], NC_000017.11:g.853724TA[9]TT[1], NC_000017.11:g.853724TA[9]TTT[1], NC_000017.11:g.853724TA[9]T[4], NC_000017.11:g.853724TA[9]T[5], NC_000017.11:g.853724TA[9]T[6], NC_000017.11:g.853724TA[9]T[7], NC_000017.11:g.853724TA[9]T[10], NC_000017.11:g.853724TA[8]TT[1], NC_000017.11:g.853724TA[8]TTT[1], NC_000017.11:g.853724TA[8]T[4], NC_000017.11:g.853724TA[8]T[5], NC_000017.11:g.853724TA[8]T[6], NC_000017.11:g.853724TA[7]TT[1], NC_000017.11:g.853724TA[7]TTT[1], NC_000017.11:g.853724TA[7]T[4], NC_000017.11:g.853724TA[7]T[5], NC_000017.11:g.853724TA[7]T[6], NC_000017.11:g.853724TA[7]T[7], NC_000017.11:g.853724TA[7]T[8], NC_000017.11:g.853724TA[6]TT[1], NC_000017.11:g.853724TA[6]TTT[1], NC_000017.11:g.853724TA[6]TTTATATATATATATATATATATATTTTT[1], NC_000017.11:g.853724TA[6]T[4], NC_000017.11:g.853724TA[6]T[5], NC_000017.11:g.853724TA[6]T[6], NC_000017.11:g.853724TA[6]T[7], NC_000017.11:g.853724TA[5]TT[1], NC_000017.11:g.853724TA[5]TTT[1], NC_000017.11:g.853724TA[5]T[4], NC_000017.11:g.853724TA[5]T[5], NC_000017.11:g.853724TA[5]T[6], NC_000017.11:g.853724TA[5]T[7], NC_000017.11:g.853724TA[4]TT[1], NC_000017.11:g.853724TA[4]TTT[1], NC_000017.11:g.853724TA[4]T[4], NC_000017.11:g.853724TA[4]T[5], NC_000017.11:g.853724TA[4]T[6], NC_000017.11:g.853724TA[4]T[7], NC_000017.11:g.853724TA[4]T[8], NC_000017.11:g.853724TA[4]T[9], NC_000017.11:g.853724TA[3]TT[1], NC_000017.11:g.853724TA[3]TTT[1], NC_000017.11:g.853724TA[3]T[4], NC_000017.11:g.853724TA[3]T[5], NC_000017.11:g.853724TA[3]T[6], NC_000017.11:g.853724TA[3]T[7], NC_000017.11:g.853724TA[3]T[8], NC_000017.11:g.853724TA[3]T[10], NC_000017.11:g.853724TA[2]TT[1], NC_000017.11:g.853724TA[2]TTT[1], NC_000017.11:g.853724TA[2]T[4], NC_000017.11:g.853724TA[2]T[5], NC_000017.11:g.853724TA[2]T[6], NC_000017.11:g.853724TA[2]T[7], NC_000017.11:g.853724TA[2]T[8], NC_000017.11:g.853724TA[2]T[10], NC_000017.11:g.853724_853725insATT, NC_000017.11:g.853724_853725insATTT, NC_000017.11:g.853724_853725insATTTT, NC_000017.11:g.853724_853725insATTTTT, NC_000017.11:g.853724_853725insATTTTTT, NC_000017.11:g.853724_853725insATTTTTTT, NC_000017.11:g.853724_853725insATTTTTTTT, NC_000017.11:g.853724_853725insATTTTTTTTTT, NC_000017.10:g.756964TA[18]T[6], NC_000017.10:g.756964TA[16]TT[1], NC_000017.10:g.756964TA[14]T[6], NC_000017.10:g.756964TA[13]TT[1], NC_000017.10:g.756964TA[13]TTT[1], NC_000017.10:g.756964TA[13]T[4], NC_000017.10:g.756964TA[13]T[6], NC_000017.10:g.756964TA[13]T[7], NC_000017.10:g.756964TA[12]TT[1], NC_000017.10:g.756964TA[12]T[5], NC_000017.10:g.756964TA[11]TT[1], NC_000017.10:g.756964TA[11]TTT[1], NC_000017.10:g.756964TA[11]T[4], NC_000017.10:g.756964TA[10]TT[1], NC_000017.10:g.756964TA[10]TTT[1], NC_000017.10:g.756964TA[10]T[4], NC_000017.10:g.756964TA[10]T[5], NC_000017.10:g.756964TA[10]T[6], NC_000017.10:g.756964TA[9]TT[1], NC_000017.10:g.756964TA[9]TTT[1], NC_000017.10:g.756964TA[9]T[4], NC_000017.10:g.756964TA[9]T[5], NC_000017.10:g.756964TA[9]T[6], NC_000017.10:g.756964TA[9]T[7], NC_000017.10:g.756964TA[9]T[10], NC_000017.10:g.756964TA[8]TT[1], NC_000017.10:g.756964TA[8]TTT[1], NC_000017.10:g.756964TA[8]T[4], NC_000017.10:g.756964TA[8]T[5], NC_000017.10:g.756964TA[8]T[6], NC_000017.10:g.756964TA[7]TT[1], NC_000017.10:g.756964TA[7]TTT[1], NC_000017.10:g.756964TA[7]T[4], NC_000017.10:g.756964TA[7]T[5], NC_000017.10:g.756964TA[7]T[6], NC_000017.10:g.756964TA[7]T[7], NC_000017.10:g.756964TA[7]T[8], NC_000017.10:g.756964TA[6]TT[1], NC_000017.10:g.756964TA[6]TTT[1], NC_000017.10:g.756964TA[6]TTTATATATATATATATATATATATTTTT[1], NC_000017.10:g.756964TA[6]T[4], NC_000017.10:g.756964TA[6]T[5], NC_000017.10:g.756964TA[6]T[6], NC_000017.10:g.756964TA[6]T[7], NC_000017.10:g.756964TA[5]TT[1], NC_000017.10:g.756964TA[5]TTT[1], NC_000017.10:g.756964TA[5]T[4], NC_000017.10:g.756964TA[5]T[5], NC_000017.10:g.756964TA[5]T[6], NC_000017.10:g.756964TA[5]T[7], NC_000017.10:g.756964TA[4]TT[1], NC_000017.10:g.756964TA[4]TTT[1], NC_000017.10:g.756964TA[4]T[4], NC_000017.10:g.756964TA[4]T[5], NC_000017.10:g.756964TA[4]T[6], NC_000017.10:g.756964TA[4]T[7], NC_000017.10:g.756964TA[4]T[8], NC_000017.10:g.756964TA[4]T[9], NC_000017.10:g.756964TA[3]TT[1], NC_000017.10:g.756964TA[3]TTT[1], NC_000017.10:g.756964TA[3]T[4], NC_000017.10:g.756964TA[3]T[5], NC_000017.10:g.756964TA[3]T[6], NC_000017.10:g.756964TA[3]T[7], NC_000017.10:g.756964TA[3]T[8], NC_000017.10:g.756964TA[3]T[10], NC_000017.10:g.756964TA[2]TT[1], NC_000017.10:g.756964TA[2]TTT[1], NC_000017.10:g.756964TA[2]T[4], NC_000017.10:g.756964TA[2]T[5], NC_000017.10:g.756964TA[2]T[6], NC_000017.10:g.756964TA[2]T[7], NC_000017.10:g.756964TA[2]T[8], NC_000017.10:g.756964TA[2]T[10], NC_000017.10:g.756964_756965insATT, NC_000017.10:g.756964_756965insATTT, NC_000017.10:g.756964_756965insATTTT, NC_000017.10:g.756964_756965insATTTTT, NC_000017.10:g.756964_756965insATTTTTT, NC_000017.10:g.756964_756965insATTTTTTT, NC_000017.10:g.756964_756965insATTTTTTTT, NC_000017.10:g.756964_756965insATTTTTTTTTT
6.
rs1491518399 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CACACAC
[Show Flanks]
- Chromosome:
- 17:958957
(GRCh38)
17:862198
(GRCh37)
- Canonical SPDI:
- NC_000017.11:958957:CACACAC:CACACACCACACAC
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACCACACAC=0.000422/5
(
ALFA)
CACACAC=0.000336/45
(GnomAD)
CACACAC=0.000412/109
(TOPMED)
CACACAC=0.000781/5
(1000Genomes)
- HGVS:
11.
rs1491477619 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA
[Show Flanks]
- Chromosome:
- 17:843014
(GRCh38)
17:746254
(GRCh37)
- Canonical SPDI:
- NC_000017.11:843012:AAA:A,NC_000017.11:843012:AAA:AA,NC_000017.11:843012:AAA:AAAA
- Gene:
- NXN (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAA=0./0
(
ALFA)
-=0.00051/8
(TOMMO)
-=0.00166/3
(Korea1K)
- HGVS:
12.
rs1491477298 has merged into rs541094677 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAAG>-,GAAGGAAG
[Show Flanks]
- Chromosome:
- 17:843060
(GRCh38)
17:746300
(GRCh37)
- Canonical SPDI:
- NC_000017.11:843055:GAAGGAAG:GAAG,NC_000017.11:843055:GAAGGAAG:GAAGGAAGGAAG
- Gene:
- NXN (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAAGGAAGGAAG=0./0
(
ALFA)
-=0.04333/26
(NorthernSweden)
-=0.04662/780
(TOMMO)
-=0.04749/87
(Korea1K)
-=0.14051/521
(TWINSUK)
-=0.18526/714
(ALSPAC)
- HGVS:
14.
rs1491460282 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 17:889752
(GRCh38)
17:792993
(GRCh37)
- Canonical SPDI:
- NC_000017.11:889752::G
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency
- MAF:
G=0.00009/2
(GnomAD)
- HGVS:
15.
rs1491459819 has merged into rs55751712 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA,AAAAA
[Show Flanks]
- Chromosome:
- 17:849527
(GRCh38)
17:752767
(GRCh37)
- Canonical SPDI:
- NC_000017.11:849518:AAAAAAAAAA:AAAAAAAA,NC_000017.11:849518:AAAAAAAAAA:AAAAAAAAA,NC_000017.11:849518:AAAAAAAAAA:AAAAAAAAAAA,NC_000017.11:849518:AAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:849518:AAAAAAAAAA:AAAAAAAAAAAAA
- Gene:
- NXN (Varview), LOC124903894 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAA=0./0
(
ALFA)
-=0.00006/16
(TOPMED)
-=0.107827/540
(1000Genomes)
-=0.182724/770
(Estonian)
- HGVS:
16.
rs1491457969 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CG>-
[Show Flanks]
- Chromosome:
- 17:924728
(GRCh38)
17:827968
(GRCh37)
- Canonical SPDI:
- NC_000017.11:924727:CG:
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.000035/1
(TOMMO)
-=0.000057/8
(GnomAD)
- HGVS:
17.
rs1491454775 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 17:917826
(GRCh38)
17:821066
(GRCh37)
- Canonical SPDI:
- NC_000017.11:917825:GA:
- Gene:
- NXN (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
18.
rs1491422099 has merged into rs577293334 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT,TTTT,TTTTT
[Show Flanks]
- Chromosome:
- 17:832366
(GRCh38)
17:735606
(GRCh37)
- Canonical SPDI:
- NC_000017.11:832353:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000017.11:832353:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000017.11:832353:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000017.11:832353:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000017.11:832353:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT
- Gene:
- NXN (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
T=0.3483/209
(NorthernSweden)
T=0.4/16
(GENOME_DK)
-=0.4028/2017
(1000Genomes)
- HGVS:
19.
rs1491411583 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 17:812852
(GRCh38)
17:716092
(GRCh37)
- Canonical SPDI:
- NC_000017.11:812851:AT:
- Gene:
- NXN (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000008/1
(GnomAD)
-=0.000008/2
(TOPMED)
-=0.000036/1
(TOMMO)
- HGVS:
20.
rs1491411111 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 17:812858
(GRCh38)
17:716098
(GRCh37)
- Canonical SPDI:
- NC_000017.11:812852:TGTGTGT:TGTGT
- Gene:
- NXN (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGT=0.000306/5
(
ALFA)
-=0.000036/1
(TOMMO)
-=0.000312/37
(GnomAD)
- HGVS: