SNP Links for Gene (Select 642976) - SNP

Links from Gene

Items: 1 to 20 of 4324

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Select item 14906787251.

rs1490678725 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:29761403 (GRCh38)
21:31133722 (GRCh37)
Canonical SPDI:: NC_000021.9:29761402:C:T
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.29761403C>T, NC_000021.8:g.31133722C>T

Select item 14905312892.

rs1490531289 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 21:29752245 (GRCh38)
21:31124564 (GRCh37)
Canonical SPDI:: NC_000021.9:29752244:T:A,NC_000021.9:29752244:T:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000312/2 (1000Genomes)
HGVS:: NC_000021.9:g.29752245T>A, NC_000021.9:g.29752245T>G, NC_000021.8:g.31124564T>A, NC_000021.8:g.31124564T>G

Select item 14903969363.

rs1490396936 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 21:29754673 (GRCh38)
21:31126992 (GRCh37)
Canonical SPDI:: NC_000021.9:29754672:A:C,NC_000021.9:29754672:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
C=0.000312/2 (1000Genomes)
HGVS:: NC_000021.9:g.29754673A>C, NC_000021.9:g.29754673A>G, NC_000021.8:g.31126992A>C, NC_000021.8:g.31126992A>G

Select item 14902021154.

rs1490202115 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:29754326 (GRCh38)
21:31126645 (GRCh37)
Canonical SPDI:: NC_000021.9:29754325:C:T
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.29754326C>T, NC_000021.8:g.31126645C>T

Select item 14901249855.

rs1490124985 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 21:29755162 (GRCh38)
21:31127481 (GRCh37)
Canonical SPDI:: NC_000021.9:29755161:CC:C
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000021.9:g.29755163del, NC_000021.8:g.31127482del

Select item 14898356786.

rs1489835678 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:29759471 (GRCh38)
21:31131790 (GRCh37)
Canonical SPDI:: NC_000021.9:29759470:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00006/16 (TOPMED)
G=0.000171/24 (GnomAD)
HGVS:: NC_000021.9:g.29759471A>G, NC_000021.8:g.31131790A>G

Select item 14897332847.

rs1489733284 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:29751207 (GRCh38)
21:31123526 (GRCh37)
Canonical SPDI:: NC_000021.9:29751206:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000054/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000223/1 (Estonian)
HGVS:: NC_000021.9:g.29751207A>G, NC_000021.8:g.31123526A>G

Select item 14896315038.

rs1489631503 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 21:29753318 (GRCh38)
21:31125637 (GRCh37)
Canonical SPDI:: NC_000021.9:29753317:T:A
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
A=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.29753318T>A, NC_000021.8:g.31125637T>A

Select item 14896007879.

rs1489600787 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 21:29760559 (GRCh38)
21:31132878 (GRCh37)
Canonical SPDI:: NC_000021.9:29760558:T:A
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.29760559T>A, NC_000021.8:g.31132878T>A

Select item 148941456610.

rs1489414566 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 21:29760487 (GRCh38)
21:31132806 (GRCh37)
Canonical SPDI:: NC_000021.9:29760486:A:C
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.29760487A>C, NC_000021.8:g.31132806A>C

Select item 148931995211.

rs1489319952 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 21:29759144 (GRCh38)
21:31131463 (GRCh37)
Canonical SPDI:: NC_000021.9:29759143:A:C,NC_000021.9:29759143:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
C=0.000023/3 (GnomAD)
HGVS:: NC_000021.9:g.29759144A>C, NC_000021.9:g.29759144A>G, NC_000021.8:g.31131463A>C, NC_000021.8:g.31131463A>G

Select item 148924918012.

rs1489249180 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:29750347 (GRCh38)
21:31122666 (GRCh37)
Canonical SPDI:: NC_000021.9:29750346:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000021.9:g.29750347A>G, NC_000021.8:g.31122666A>G

Select item 148907289113.

rs1489072891 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 21:29752742 (GRCh38)
21:31125061 (GRCh37)
Canonical SPDI:: NC_000021.9:29752741:C:A
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000021.9:g.29752742C>A, NC_000021.8:g.31125061C>A

Select item 148887614214.

rs1488876142 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 21:29749314 (GRCh38)
21:31121633 (GRCh37)
Canonical SPDI:: NC_000021.9:29749313:A:C
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.29749314A>C, NC_000021.8:g.31121633A>C

Select item 148874762515.

rs1488747625 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:29752273 (GRCh38)
21:31124592 (GRCh37)
Canonical SPDI:: NC_000021.9:29752272:T:C
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.29752273T>C, NC_000021.8:g.31124592T>C

Select item 148839139216.

rs1488391392 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:29762211 (GRCh38)
21:31134530 (GRCh37)
Canonical SPDI:: NC_000021.9:29762210:C:T
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000212/4 (TOMMO)
T=0.000684/2 (KOREAN)
T=0.001092/2 (Korea1K)
HGVS:: NC_000021.9:g.29762211C>T, NC_000021.8:g.31134530C>T

Select item 148763448717.

rs1487634487 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 21:29758500 (GRCh38)
21:31130819 (GRCh37)
Canonical SPDI:: NC_000021.9:29758499:C:A
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.29758500C>A, NC_000021.8:g.31130819C>A

Select item 148762030218.

rs1487620302 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 21:29757950 (GRCh38)
21:31130269 (GRCh37)
Canonical SPDI:: NC_000021.9:29757949:C:A
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000021.9:g.29757950C>A, NC_000021.8:g.31130269C>A

Select item 148700133219.

rs1487001332 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 21:29761115 (GRCh38)
21:31133434 (GRCh37)
Canonical SPDI:: NC_000021.9:29761114:A:T
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.29761115A>T, NC_000021.8:g.31133434A>T

Select item 148691546220.

rs1486915462 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 21:29748411 (GRCh38)
21:31120730 (GRCh37)
Canonical SPDI:: NC_000021.9:29748410:A:C,NC_000021.9:29748410:A:G
Gene:: GRIK1 (Varview), GRIK1-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.29748411A>C, NC_000021.9:g.29748411A>G, NC_000021.8:g.31120730A>C, NC_000021.8:g.31120730A>G

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