SNP Links for Gene (Select 64109) - SNP

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Select item 14915865261.

rs1491586526 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: Y:1191317 (GRCh38)
Y:0 (GRCh37)
Canonical SPDI:: NC_000024.10:1191315:TCT:T
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000024.10:g.1191317_1191318del, NG_034237.1:g.26407_26408del, NC_000023.11:g.1191317_1191318del

Select item 14915617812.

rs1491561781 [Homo sapiens]

Variant type:: INS
Alleles:: ->C,CTTTC [Show Flanks]
Chromosome:: Y:1192692 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1192692::C,NC_000024.10:1192692::CTTTC
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00008/1 (ALFA)
HGVS:: NC_000024.10:g.1192692_1192693insC, NC_000024.10:g.1192692_1192693insCTTTC, NG_034237.1:g.25031_25032insG, NG_034237.1:g.25031_25032insGAAAG, NC_000023.11:g.1192692_1192693insC, NC_000023.11:g.1192692_1192693insCTTTC

Select item 14915319833.

rs1491531983 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: Y:1213267 (GRCh38)
Y:1282160 (GRCh37)
Canonical SPDI:: NC_000024.10:1213266:TT:
Gene:: CRLF2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000024.10:g.1213267_1213268del, NC_000024.9:g.1282160_1282161del, NG_034237.1:g.4456_4457del, NC_000023.11:g.1213267_1213268del, NC_000023.10:g.1332160_1332161del

Select item 14915310204.

rs1491531020 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: Y:1191332 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1191332:C:CC
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
C=0.000083/2 (TOMMO)
C=0.000302/33 (GnomAD)
HGVS:: NC_000024.10:g.1191333dup, NG_034237.1:g.26391dup, NC_000023.11:g.1191333dup

Select item 14915259045.

rs1491525904 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CGTGTATATAAGCTGTGTATATATGTGTGGGTATATA [Show Flanks]
Chromosome:: Y:1200511 (GRCh38)
Y:1269396 (GRCh37)
Canonical SPDI:: NC_000024.10:1200511:TATATA:TATATACGTGTATATAAGCTGTGTATATATGTGTGGGTATATA
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.1200512_1200517TA[3]CGTGTATATAAGCTGTGTATATATGTGTGGGTATATA[1], NC_000024.9:g.1269396_1269401TA[3]CGTGTATATAAGCTGTGTATATATGTGTGGGTATATA[1], NG_034237.1:g.17207_17212TA[3]CCCACACATATATACACAGCTTATATACACGTATATA[1], NC_000023.11:g.1200512_1200517TA[3]CGTGTATATAAGCTGTGTATATATGTGTGGGTATATA[1], NC_000023.10:g.1319396_1319401TA[3]CGTGTATATAAGCTGTGTATATATGTGTGGGTATATA[1]

Select item 14915091646.

rs1491509164 has merged into rs782280523 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: Y:1203105 (GRCh38)
Y:1271974 (GRCh37)
Canonical SPDI:: NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1203095:AAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
A=0.0101/38 (1000Genomes)
HGVS:: NC_000024.10:g.1203105_1203121del, NC_000024.10:g.1203106_1203121del, NC_000024.10:g.1203107_1203121del, NC_000024.10:g.1203108_1203121del, NC_000024.10:g.1203109_1203121del, NC_000024.10:g.1203110_1203121del, NC_000024.10:g.1203111_1203121del, NC_000024.10:g.1203113_1203121del, NC_000024.10:g.1203114_1203121del, NC_000024.10:g.1203115_1203121del, NC_000024.10:g.1203116_1203121del, NC_000024.10:g.1203117_1203121del, NC_000024.10:g.1203118_1203121del, NC_000024.10:g.1203119_1203121del, NC_000024.10:g.1203120_1203121del, NC_000024.10:g.1203121del, NC_000024.10:g.1203121dup, NC_000024.10:g.1203120_1203121dup, NC_000024.10:g.1203119_1203121dup, NC_000024.10:g.1203118_1203121dup, NC_000024.10:g.1203117_1203121dup, NC_000024.10:g.1203114_1203121dup, NC_000024.9:g.1271985_1271987dup, NC_000024.9:g.1271974_1271987del, NC_000024.9:g.1271975_1271987del, NC_000024.9:g.1271976_1271987del, NC_000024.9:g.1271977_1271987del, NC_000024.9:g.1271978_1271987del, NC_000024.9:g.1271979_1271987del, NC_000024.9:g.1271980_1271987del, NC_000024.9:g.1271982_1271987del, NC_000024.9:g.1271983_1271987del, NC_000024.9:g.1271984_1271987del, NC_000024.9:g.1271985_1271987del, NC_000024.9:g.1271986_1271987del, NC_000024.9:g.1271987del, NC_000024.9:g.1271987dup, NC_000024.9:g.1271986_1271987dup, NC_000024.9:g.1271984_1271987dup, NC_000024.9:g.1271983_1271987dup, NC_000024.9:g.1271982_1271987dup, NC_000024.9:g.1271981_1271987dup, NC_000024.9:g.1271980_1271987dup, NC_000024.9:g.1271977_1271987dup, NG_034237.1:g.14612_14628del, NG_034237.1:g.14613_14628del, NG_034237.1:g.14614_14628del, NG_034237.1:g.14615_14628del, NG_034237.1:g.14616_14628del, NG_034237.1:g.14617_14628del, NG_034237.1:g.14618_14628del, NG_034237.1:g.14620_14628del, NG_034237.1:g.14621_14628del, NG_034237.1:g.14622_14628del, NG_034237.1:g.14623_14628del, NG_034237.1:g.14624_14628del, NG_034237.1:g.14625_14628del, NG_034237.1:g.14626_14628del, NG_034237.1:g.14627_14628del, NG_034237.1:g.14628del, NG_034237.1:g.14628dup, NG_034237.1:g.14627_14628dup, NG_034237.1:g.14626_14628dup, NG_034237.1:g.14625_14628dup, NG_034237.1:g.14624_14628dup, NG_034237.1:g.14621_14628dup, NC_000023.11:g.1203105_1203121del, NC_000023.11:g.1203106_1203121del, NC_000023.11:g.1203107_1203121del, NC_000023.11:g.1203108_1203121del, NC_000023.11:g.1203109_1203121del, NC_000023.11:g.1203110_1203121del, NC_000023.11:g.1203111_1203121del, NC_000023.11:g.1203113_1203121del, NC_000023.11:g.1203114_1203121del, NC_000023.11:g.1203115_1203121del, NC_000023.11:g.1203116_1203121del, NC_000023.11:g.1203117_1203121del, NC_000023.11:g.1203118_1203121del, NC_000023.11:g.1203119_1203121del, NC_000023.11:g.1203120_1203121del, NC_000023.11:g.1203121del, NC_000023.11:g.1203121dup, NC_000023.11:g.1203120_1203121dup, NC_000023.11:g.1203119_1203121dup, NC_000023.11:g.1203118_1203121dup, NC_000023.11:g.1203117_1203121dup, NC_000023.11:g.1203114_1203121dup, NC_000023.10:g.1321985_1321987dup, NC_000023.10:g.1321974_1321987del, NC_000023.10:g.1321975_1321987del, NC_000023.10:g.1321976_1321987del, NC_000023.10:g.1321977_1321987del, NC_000023.10:g.1321978_1321987del, NC_000023.10:g.1321979_1321987del, NC_000023.10:g.1321980_1321987del, NC_000023.10:g.1321982_1321987del, NC_000023.10:g.1321983_1321987del, NC_000023.10:g.1321984_1321987del, NC_000023.10:g.1321985_1321987del, NC_000023.10:g.1321986_1321987del, NC_000023.10:g.1321987del, NC_000023.10:g.1321987dup, NC_000023.10:g.1321986_1321987dup, NC_000023.10:g.1321984_1321987dup, NC_000023.10:g.1321983_1321987dup, NC_000023.10:g.1321982_1321987dup, NC_000023.10:g.1321981_1321987dup, NC_000023.10:g.1321980_1321987dup, NC_000023.10:g.1321977_1321987dup

Select item 14914955557.

rs1491495555 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C,CTCTCCCCTCCCCTTCCCCCC [Show Flanks]
Chromosome:: Y:1213055 (GRCh38)
Y:1281949 (GRCh37)
Canonical SPDI:: NC_000024.10:1213055:CCCCC:CCCCCC,NC_000024.10:1213055:CCCCC:CCCCCCTCTCCCCTCCCCTTCCCCCC
Gene:: CRLF2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: CCCCCCTCTCCCCTCCCCTTCCCCCC=0./0 (ALFA)
HGVS:: NC_000024.10:g.1213060dup, NC_000024.10:g.1213056_1213060C[6]TC[2]CCCTCCCCTTCCCCCC[1], NC_000024.9:g.1281953dup, NC_000024.9:g.1281949_1281953C[6]TC[2]CCCTCCCCTTCCCCCC[1], NG_034237.1:g.4668dup, NG_034237.1:g.4664_4668G[6]AAGGGGAGGGGAGAGGGGGG[1], NC_000023.11:g.1213060dup, NC_000023.11:g.1213056_1213060C[6]TC[2]CCCTCCCCTTCCCCCC[1], NC_000023.10:g.1331953dup, NC_000023.10:g.1331949_1331953C[6]TC[2]CCCTCCCCTTCCCCCC[1]

Select item 14914951868.

rs1491495186 has merged into rs1371518156 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,TT,TTT,TTTTTT [Show Flanks]
Chromosome:: Y:1192693 (GRCh38)
Y:0 (GRCh37)
Canonical SPDI:: NC_000024.10:1192691:TTTTT:T,NC_000024.10:1192691:TTTTT:TTT,NC_000024.10:1192691:TTTTT:TTTT,NC_000024.10:1192691:TTTTT:TTTTTTT
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000045/12 (TOPMED)
HGVS:: NC_000024.10:g.1192693_1192696del, NC_000024.10:g.1192695_1192696del, NC_000024.10:g.1192696del, NC_000024.10:g.1192695_1192696dup, NG_034237.1:g.25029_25032del, NG_034237.1:g.25031_25032del, NG_034237.1:g.25032del, NG_034237.1:g.25031_25032dup, NC_000023.11:g.1192693_1192696del, NC_000023.11:g.1192695_1192696del, NC_000023.11:g.1192696del, NC_000023.11:g.1192695_1192696dup

Select item 14914405169.

rs1491440516 [Homo sapiens]

Variant type:: INS
Alleles:: ->TTTG,TTTGTG,TTTTG,TTTTTATATTCTTTCTTTTTTTCCCA,TTTTTG,TTTTTGGG,TTTTTTGG [Show Flanks]
Chromosome:: Y:1197110 (GRCh38)
Y:1265228 (GRCh37)
Canonical SPDI:: NC_000024.10:1197110::TTTG,NC_000024.10:1197110::TTTGTG,NC_000024.10:1197110::TTTTG,NC_000024.10:1197110::TTTTTATATTCTTTCTTTTTTTCCCA,NC_000024.10:1197110::TTTTTG,NC_000024.10:1197110::TTTTTGGG,NC_000024.10:1197110::TTTTTTGG
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTG=0./0 (ALFA)
TTTTTG=0.00021/6 (TOMMO)
HGVS:: NC_000024.10:g.1197110_1197111insTTTG, NC_000024.10:g.1197110_1197111insTTTGTG, NC_000024.10:g.1197110_1197111insTTTTG, NC_000024.10:g.1197110_1197111insTTTTTATATTCTTTCTTTTTTTCCCA, NC_000024.10:g.1197110_1197111insTTTTTG, NC_000024.10:g.1197110_1197111insTTTTTGGG, NC_000024.10:g.1197110_1197111insTTTTTTGG, NC_000024.9:g.1265227_1265228insTTTG, NC_000024.9:g.1265227_1265228insTTTGTG, NC_000024.9:g.1265227_1265228insTTTTG, NC_000024.9:g.1265227_1265228insTTTTTATATTCTTTCTTTTTTTCCCA, NC_000024.9:g.1265227_1265228insTTTTTG, NC_000024.9:g.1265227_1265228insTTTTTGGG, NC_000024.9:g.1265227_1265228insTTTTTTGG, NG_034237.1:g.20613_20614insCAAA, NG_034237.1:g.20613_20614insCACAAA, NG_034237.1:g.20613_20614insCAAAA, NG_034237.1:g.20613_20614insTGGGAAAAAAAGAAAGAATATAAAAA, NG_034237.1:g.20613_20614insCAAAAA, NG_034237.1:g.20613_20614insCCCAAAAA, NG_034237.1:g.20613_20614insCCAAAAAA, NC_000023.11:g.1197110_1197111insTTTG, NC_000023.11:g.1197110_1197111insTTTGTG, NC_000023.11:g.1197110_1197111insTTTTG, NC_000023.11:g.1197110_1197111insTTTTTATATTCTTTCTTTTTTTCCCA, NC_000023.11:g.1197110_1197111insTTTTTG, NC_000023.11:g.1197110_1197111insTTTTTGGG, NC_000023.11:g.1197110_1197111insTTTTTTGG, NC_000023.10:g.1315227_1315228insTTTG, NC_000023.10:g.1315227_1315228insTTTGTG, NC_000023.10:g.1315227_1315228insTTTTG, NC_000023.10:g.1315227_1315228insTTTTTATATTCTTTCTTTTTTTCCCA, NC_000023.10:g.1315227_1315228insTTTTTG, NC_000023.10:g.1315227_1315228insTTTTTGGG, NC_000023.10:g.1315227_1315228insTTTTTTGG

Select item 149143611710.

rs1491436117 has merged into rs1176813644 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: Y:1193789 (GRCh38)
Y:6 (GRCh37)
Canonical SPDI:: NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000024.10:1193781:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000024.10:g.1193789_1193803del, NC_000024.10:g.1193790_1193803del, NC_000024.10:g.1193792_1193803del, NC_000024.10:g.1193793_1193803del, NC_000024.10:g.1193794_1193803del, NC_000024.10:g.1193795_1193803del, NC_000024.10:g.1193796_1193803del, NC_000024.10:g.1193797_1193803del, NC_000024.10:g.1193798_1193803del, NC_000024.10:g.1193799_1193803del, NC_000024.10:g.1193800_1193803del, NC_000024.10:g.1193801_1193803del, NC_000024.10:g.1193802_1193803del, NC_000024.10:g.1193803del, NC_000024.10:g.1193803dup, NC_000024.10:g.1193802_1193803dup, NC_000024.10:g.1193801_1193803dup, NC_000024.10:g.1193800_1193803dup, NC_000024.10:g.1193799_1193803dup, NC_000024.10:g.1193798_1193803dup, NC_000024.10:g.1193797_1193803dup, NC_000024.10:g.1193796_1193803dup, NC_000024.10:g.1193795_1193803dup, NC_000024.10:g.1193794_1193803dup, NG_034237.1:g.23928_23942del, NG_034237.1:g.23929_23942del, NG_034237.1:g.23931_23942del, NG_034237.1:g.23932_23942del, NG_034237.1:g.23933_23942del, NG_034237.1:g.23934_23942del, NG_034237.1:g.23935_23942del, NG_034237.1:g.23936_23942del, NG_034237.1:g.23937_23942del, NG_034237.1:g.23938_23942del, NG_034237.1:g.23939_23942del, NG_034237.1:g.23940_23942del, NG_034237.1:g.23941_23942del, NG_034237.1:g.23942del, NG_034237.1:g.23942dup, NG_034237.1:g.23941_23942dup, NG_034237.1:g.23940_23942dup, NG_034237.1:g.23939_23942dup, NG_034237.1:g.23938_23942dup, NG_034237.1:g.23937_23942dup, NG_034237.1:g.23936_23942dup, NG_034237.1:g.23935_23942dup, NG_034237.1:g.23934_23942dup, NG_034237.1:g.23933_23942dup, NC_000023.11:g.1193789_1193803del, NC_000023.11:g.1193790_1193803del, NC_000023.11:g.1193792_1193803del, NC_000023.11:g.1193793_1193803del, NC_000023.11:g.1193794_1193803del, NC_000023.11:g.1193795_1193803del, NC_000023.11:g.1193796_1193803del, NC_000023.11:g.1193797_1193803del, NC_000023.11:g.1193798_1193803del, NC_000023.11:g.1193799_1193803del, NC_000023.11:g.1193800_1193803del, NC_000023.11:g.1193801_1193803del, NC_000023.11:g.1193802_1193803del, NC_000023.11:g.1193803del, NC_000023.11:g.1193803dup, NC_000023.11:g.1193802_1193803dup, NC_000023.11:g.1193801_1193803dup, NC_000023.11:g.1193800_1193803dup, NC_000023.11:g.1193799_1193803dup, NC_000023.11:g.1193798_1193803dup, NC_000023.11:g.1193797_1193803dup, NC_000023.11:g.1193796_1193803dup, NC_000023.11:g.1193795_1193803dup, NC_000023.11:g.1193794_1193803dup

Select item 149142213411.

rs1491422134 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T,TCCTTT,TCCTTTCTTT,TCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,TCTTT,TCTTTCCTTT,TCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,TCTTTCTTT,TCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,TCTTTCTTTCTTT,TCTTTCTTTCTTTCTTT,TCTTTCTTTCTTTCTTTCTTT,TCTTTCTTTCTTTCTTTCTTTCTTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTT,TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,TCTTTCTTTT,TCTTTCTTTTT,TCTTTT,TT [Show Flanks]
Chromosome:: Y:1191346 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1191346:TT:TTT,NC_000024.10:1191346:TT:TTTCCTTT,NC_000024.10:1191346:TT:TTTCCTTTCTTT,NC_000024.10:1191346:TT:TTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCCTTT,NC_000024.10:1191346:TT:TTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTT,NC_000024.10:1191346:TT:TTTCTTTCTTTTT,NC_000024.10:1191346:TT:TTTCTTTT,NC_000024.10:1191346:TT:TTTT
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTCTTT=0./0 (ALFA)
HGVS:: NC_000024.10:g.1191348dup, NC_000024.10:g.1191348_1191349insTCCTTT, NC_000024.10:g.1191348_1191349insTCCTTTCTTT, NC_000024.10:g.1191348_1191349insTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT, NC_000024.10:g.1191348_1191349insTCTTT, NC_000024.10:g.1191347_1191348TTTC[2]CTTT[1], NC_000024.10:g.1191347_1191348TTTC[2]CTTT[10], NC_000024.10:g.1191347_1191348TTTC[2]TTT[1], NC_000024.10:g.1191347_1191348TTTC[3]CTTT[9], NC_000024.10:g.1191347_1191348TTTC[3]TTT[1], NC_000024.10:g.1191347_1191348TTTC[4]TTT[1], NC_000024.10:g.1191347_1191348TTTC[5]TTT[1], NC_000024.10:g.1191347_1191348TTTC[6]TTT[1], NC_000024.10:g.1191347_1191348TTTC[7]TTT[1], NC_000024.10:g.1191347_1191348TTTC[8]TTT[1], NC_000024.10:g.1191347_1191348TTTC[2]T[4], NC_000024.10:g.1191347_1191348TTTC[2]T[5], NC_000024.10:g.1191348_1191349insTCTTTT, NC_000024.10:g.1191347_1191348dup, NG_034237.1:g.26377dup, NG_034237.1:g.26377_26378insAGGAAA, NG_034237.1:g.26376_26377AAAG[2]GAAA[1], NG_034237.1:g.26376_26377AAAG[9]GAAA[1], NG_034237.1:g.26377_26378insAGAAA, NG_034237.1:g.26377_26378insAGGAAAGAAA, NG_034237.1:g.26376_26377AAAG[10]GAAA[2], NG_034237.1:g.26376_26377AAAG[2]AAA[1], NG_034237.1:g.26376_26377AAAG[9]GAAA[3], NG_034237.1:g.26376_26377AAAG[3]AAA[1], NG_034237.1:g.26376_26377AAAG[4]AAA[1], NG_034237.1:g.26376_26377AAAG[5]AAA[1], NG_034237.1:g.26376_26377AAAG[6]AAA[1], NG_034237.1:g.26376_26377AAAG[7]AAA[1], NG_034237.1:g.26376_26377AAAG[8]AAA[1], NG_034237.1:g.26376_26377A[4]GAAA[2], NG_034237.1:g.26376_26377A[5]GAAA[2], NG_034237.1:g.26376_26377A[4]GAAA[1], NG_034237.1:g.26376_26377dup, NC_000023.11:g.1191348dup, NC_000023.11:g.1191348_1191349insTCCTTT, NC_000023.11:g.1191348_1191349insTCCTTTCTTT, NC_000023.11:g.1191348_1191349insTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT, NC_000023.11:g.1191348_1191349insTCTTT, NC_000023.11:g.1191347_1191348TTTC[2]CTTT[1], NC_000023.11:g.1191347_1191348TTTC[2]CTTT[10], NC_000023.11:g.1191347_1191348TTTC[2]TTT[1], NC_000023.11:g.1191347_1191348TTTC[3]CTTT[9], NC_000023.11:g.1191347_1191348TTTC[3]TTT[1], NC_000023.11:g.1191347_1191348TTTC[4]TTT[1], NC_000023.11:g.1191347_1191348TTTC[5]TTT[1], NC_000023.11:g.1191347_1191348TTTC[6]TTT[1], NC_000023.11:g.1191347_1191348TTTC[7]TTT[1], NC_000023.11:g.1191347_1191348TTTC[8]TTT[1], NC_000023.11:g.1191347_1191348TTTC[2]T[4], NC_000023.11:g.1191347_1191348TTTC[2]T[5], NC_000023.11:g.1191348_1191349insTCTTTT, NC_000023.11:g.1191347_1191348dup

Select item 149142146112.

rs1491421461 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: Y:1207422 (GRCh38)
Y:1276315 (GRCh37)
Canonical SPDI:: NC_000024.10:1207421:AT:
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.000007/1 (GnomAD)
-=0.000248/7 (TOMMO)
HGVS:: NC_000024.10:g.1207422_1207423del, NC_000024.9:g.1276315_1276316del, NG_034237.1:g.10301_10302del, NC_000023.11:g.1207422_1207423del, NC_000023.10:g.1326315_1326316del

Select item 149139381713.

rs1491393817 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: Y:1203095 (GRCh38)
Y:1271965 (GRCh37)
Canonical SPDI:: NC_000024.10:1203094:CA:
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00067/8 (ALFA)
-=0.00069/19 (TOMMO)
HGVS:: NC_000024.10:g.1203095_1203096del, NC_000024.9:g.1271987dup, NC_000024.9:g.1271964del, NG_034237.1:g.14628_14629del, NC_000023.11:g.1203095_1203096del, NC_000023.10:g.1321987dup, NC_000023.10:g.1321964del

Select item 149138335614.

rs1491383356 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: Y:1193781 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1193780:CA:
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00017/2 (ALFA)
-=0.00042/11 (TOMMO)
HGVS:: NC_000024.10:g.1193781_1193782del, NG_034237.1:g.23942_23943del, NC_000023.11:g.1193781_1193782del

Select item 149135323815.

rs1491353238 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: Y:1207422 (GRCh38)
Y:1276316 (GRCh37)
Canonical SPDI:: NC_000024.10:1207422:TTTTTTT:TTTTTTTT
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (GnomAD)
HGVS:: NC_000024.10:g.1207429dup, NC_000024.9:g.1276322dup, NG_034237.1:g.10301dup, NC_000023.11:g.1207429dup, NC_000023.10:g.1326322dup

Select item 149135318116.

rs1491353181 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: Y:1191346 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1191345:CT:
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000024.10:g.1191346_1191347del, NG_034237.1:g.26377_26378del, NC_000023.11:g.1191346_1191347del

Select item 149132610517.

rs1491326105 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTGG,GTGGATGGGTGG [Show Flanks]
Chromosome:: Y:1211361 (GRCh38)
Y:1280255 (GRCh37)
Canonical SPDI:: NC_000024.10:1211361:TGG:TGGGTGG,NC_000024.10:1211361:TGG:TGGGTGGATGGGTGG
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGGGTGGATGGGTGG=0./0 (ALFA)
HGVS:: NC_000024.10:g.1211364_1211365insGTGG, NC_000024.10:g.1211364_1211365insGTGGATGGGTGG, NC_000024.9:g.1280257_1280258insGTGG, NC_000024.9:g.1280257_1280258insGTGGATGGGTGG, NG_034237.1:g.6362_6363insCCCA, NG_034237.1:g.6362_6363insCCCATCCACCCA, NC_000023.11:g.1211364_1211365insGTGG, NC_000023.11:g.1211364_1211365insGTGGATGGGTGG, NC_000023.10:g.1330257_1330258insGTGG, NC_000023.10:g.1330257_1330258insGTGGATGGGTGG

Select item 149122736218.

rs1491227362 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: Y:1191316 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1191316:C:CC
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0.00025/3 (ALFA)
HGVS:: NC_000024.10:g.1191317dup, NG_034237.1:g.26407dup, NC_000023.11:g.1191317dup

Select item 149121668819.

rs1491216688 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C,CTTCC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC [Show Flanks]
Chromosome:: Y:1191352 (GRCh38)
Y:-1 (GRCh37)
Canonical SPDI:: NC_000024.10:1191352:C:CC,NC_000024.10:1191352:C:CCTTCC,NC_000024.10:1191352:C:CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0.00008/1 (ALFA)
HGVS:: NC_000024.10:g.1191353dup, NC_000024.10:g.1191353_1191354insCTTCC, NC_000024.10:g.1191353CCTT[10]CC[1], NG_034237.1:g.26371dup, NG_034237.1:g.26371_26372insGAAGG, NG_034237.1:g.26371GGAA[10]GG[1], NC_000023.11:g.1191353dup, NC_000023.11:g.1191353_1191354insCTTCC, NC_000023.11:g.1191353CCTT[10]CC[1]

Select item 149120059120.

rs1491200591 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: Y:1191333 (GRCh38)
Y:0 (GRCh37)
Canonical SPDI:: NC_000024.10:1191331:TCT:T
Gene:: CRLF2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000045/5 (GnomAD)
HGVS:: NC_000024.10:g.1191333_1191334del, NG_034237.1:g.26391_26392del, NC_000023.11:g.1191333_1191334del

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