SNP Links for Gene (Select 6036) - SNP

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Select item 14914208231.

rs1491420823 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TACTT [Show Flanks]
Chromosome:: 14:20956802 (GRCh38)
14:21424962 (GRCh37)
Canonical SPDI:: NC_000014.9:20956802:TT:TTTACTT
Gene:: RNASE2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTTACTT=0./0 (ALFA)
HGVS:: NC_000014.9:g.20956804_20956805insTACTT, NC_000014.8:g.21424963_21424964insTACTT

Select item 14911368442.

rs1491136844 has merged into rs369524637 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,TTT,TTTATTTT,TTTATTTTATTTT,TTTATTTTCTTT,TTTATTTTTT,TTTATTTTTTTT [Show Flanks]
Chromosome:: 14:20956803 (GRCh38)
14:21424962 (GRCh37)
Canonical SPDI:: NC_000014.9:20956801:TTT:T,NC_000014.9:20956801:TTT:TTTT,NC_000014.9:20956801:TTT:TTTTATTTT,NC_000014.9:20956801:TTT:TTTTATTTTATTTT,NC_000014.9:20956801:TTT:TTTTATTTTCTTT,NC_000014.9:20956801:TTT:TTTTATTTTTT,NC_000014.9:20956801:TTT:TTTTATTTTTTTT
Gene:: RNASE2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTT=0./0 (ALFA)
TTTTATTTTT=0.00007/1 (TOMMO)
T=0.00016/1 (1000Genomes)
TTTTATTTTT=0.00055/1 (Korea1K)
HGVS:: NC_000014.9:g.20956803_20956804del, NC_000014.9:g.20956804dup, NC_000014.9:g.20956802_20956804T[4]ATTTT[1], NC_000014.9:g.20956802_20956804TTTTA[2]T[4], NC_000014.9:g.20956802_20956804T[4]ATTTTCTTT[1], NC_000014.9:g.20956802_20956804T[4]ATTTTTT[1], NC_000014.9:g.20956802_20956804T[4]ATTTTTTTT[1], NC_000014.8:g.21424962_21424963del, NC_000014.8:g.21424963dup, NC_000014.8:g.21424961_21424963T[4]ATTTT[1], NC_000014.8:g.21424961_21424963TTTTA[2]T[4], NC_000014.8:g.21424961_21424963T[4]ATTTTCTTT[1], NC_000014.8:g.21424961_21424963T[4]ATTTTTT[1], NC_000014.8:g.21424961_21424963T[4]ATTTTTTTT[1]

Select item 14892025183.

rs1489202518 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20953840 (GRCh38)
14:21421999 (GRCh37)
Canonical SPDI:: NC_000014.9:20953839:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
T=0.000035/1 (TOMMO)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000014.9:g.20953840C>T, NC_000014.8:g.21421999C>T

Select item 14861886734.

rs1486188673 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20955747 (GRCh38)
14:21423906 (GRCh37)
Canonical SPDI:: NC_000014.9:20955746:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.20955747C>T, NC_000014.8:g.21423906C>T

Select item 14861668505.

rs1486166850 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TTTT [Show Flanks]
Chromosome:: 14:20954403 (GRCh38)
14:21422563 (GRCh37)
Canonical SPDI:: NC_000014.9:20954403:T:TTTTT
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTTTT=0.0007/3 (ALFA)
HGVS:: NC_000014.9:g.20954404_20954405insTTTT, NC_000014.8:g.21422563_21422564insTTTT

Select item 14860231466.

rs1486023146 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 14:20956776 (GRCh38)
14:21424935 (GRCh37)
Canonical SPDI:: NC_000014.9:20956775:A:T
Gene:: RNASE2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20956776A>T, NC_000014.8:g.21424935A>T

Select item 14853238297.

rs1485323829 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20956733 (GRCh38)
14:21424892 (GRCh37)
Canonical SPDI:: NC_000014.9:20956732:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20956733C>T, NC_000014.8:g.21424892C>T

Select item 14848281508.

rs1484828150 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20956854 (GRCh38)
14:21425013 (GRCh37)
Canonical SPDI:: NC_000014.9:20956853:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000036/5 (GnomAD)
HGVS:: NC_000014.9:g.20956854G>A, NC_000014.8:g.21425013G>A

Select item 14841772399.

rs1484177239 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 14:20954961 (GRCh38)
14:21423120 (GRCh37)
Canonical SPDI:: NC_000014.9:20954960:T:C,NC_000014.9:20954960:T:G
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000038/10 (TOPMED)
C=0.000071/1 (TOMMO)
HGVS:: NC_000014.9:g.20954961T>C, NC_000014.9:g.20954961T>G, NC_000014.8:g.21423120T>C, NC_000014.8:g.21423120T>G

Select item 148415281310.

rs1484152813 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20953557 (GRCh38)
14:21421716 (GRCh37)
Canonical SPDI:: NC_000014.9:20953556:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20953557G>A, NC_000014.8:g.21421716G>A

Select item 148266803111.

rs1482668031 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20953852 (GRCh38)
14:21422011 (GRCh37)
Canonical SPDI:: NC_000014.9:20953851:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000014.9:g.20953852G>A, NC_000014.8:g.21422011G>A

Select item 148236400112.

rs1482364001 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20956743 (GRCh38)
14:21424902 (GRCh37)
Canonical SPDI:: NC_000014.9:20956742:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000142/2 (ALFA)
T=0.000026/7 (TOPMED)
T=0.000037/5 (GnomAD)
HGVS:: NC_000014.9:g.20956743C>T, NC_000014.8:g.21424902C>T

Select item 148146722513.

rs1481467225 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20955469 (GRCh38)
14:21423628 (GRCh37)
Canonical SPDI:: NC_000014.9:20955468:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
HGVS:: NC_000014.9:g.20955469C>T, NC_000014.8:g.21423628C>T

Select item 148121319214.

rs1481213192 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:20955927 (GRCh38)
14:21424086 (GRCh37)
Canonical SPDI:: NC_000014.9:20955926:T:C
Gene:: RNASE2 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.20955927T>C, NC_000014.8:g.21424086T>C, NM_002934.3:c.156T>C, NM_002934.2:c.156T>C

Select item 148095578215.

rs1480955782 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20954843 (GRCh38)
14:21423002 (GRCh37)
Canonical SPDI:: NC_000014.9:20954842:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000214/3 (ALFA)
A=0.000068/18 (TOPMED)
A=0.000086/12 (GnomAD)
HGVS:: NC_000014.9:g.20954843G>A, NC_000014.8:g.21423002G>A

Select item 147944593516.

rs1479445935 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20953979 (GRCh38)
14:21422138 (GRCh37)
Canonical SPDI:: NC_000014.9:20953978:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.20953979G>A, NC_000014.8:g.21422138G>A

Select item 147866127417.

rs1478661274 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:20953522 (GRCh38)
14:21421681 (GRCh37)
Canonical SPDI:: NC_000014.9:20953521:G:A,NC_000014.9:20953521:G:T
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.20953522G>A, NC_000014.9:g.20953522G>T, NC_000014.8:g.21421681G>A, NC_000014.8:g.21421681G>T

Select item 147800508218.

rs1478005082 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:20954343 (GRCh38)
14:21422502 (GRCh37)
Canonical SPDI:: NC_000014.9:20954342:C:T
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.20954343C>T, NC_000014.8:g.21422502C>T

Select item 147795187619.

rs1477951876 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:20955020 (GRCh38)
14:21423179 (GRCh37)
Canonical SPDI:: NC_000014.9:20955019:G:A
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.20955020G>A, NC_000014.8:g.21423179G>A

Select item 147776827620.

rs1477768276 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:20955346 (GRCh38)
14:21423505 (GRCh37)
Canonical SPDI:: NC_000014.9:20955345:A:G
Gene:: RNASE2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000064/9 (GnomAD)
G=0.000087/23 (TOPMED)
HGVS:: NC_000014.9:g.20955346A>G, NC_000014.8:g.21423505A>G

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