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Links from Gene

Items: 1 to 20 of 1336

2.

rs1490714254 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    A>C [Show Flanks]
    Chromosome:
    6:31658756 (GRCh38)
    6:31626533 (GRCh37)
    Canonical SPDI:
    NC_000006.12:31658755:A:C
    Gene:
    C6orf47 (Varview)
    Functional Consequence:
    3_prime_UTR_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    C=0./0 (ALFA)
    C=0.0006/17 (TOMMO)
    C=0.04349/127 (KOREAN)
    HGVS:
    3.

    rs1490461667 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      CTC>- [Show Flanks]
      Chromosome:
      6:31659096 (GRCh38)
      6:31626873 (GRCh37)
      Canonical SPDI:
      NC_000006.12:31659092:CTCCTC:CTC
      Gene:
      C6orf47 (Varview)
      Functional Consequence:
      coding_sequence_variant,inframe_deletion
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      CTCCTC=0.000071/1 (ALFA)
      -=0.000004/1 (TOPMED)
      -=0.000012/3 (GnomAD_exomes)
      HGVS:
      4.

      rs1489639435 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>G [Show Flanks]
        Chromosome:
        6:31657988 (GRCh38)
        6:31625765 (GRCh37)
        Canonical SPDI:
        NC_000006.12:31657987:C:G
        Gene:
        APOM (Varview), C6orf47 (Varview)
        Functional Consequence:
        downstream_transcript_variant,500B_downstream_variant,intron_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        G=0./0 (ALFA)
        G=0.000004/1 (TOPMED)
        G=0.000014/2 (GnomAD)
        HGVS:
        5.
        6.

        rs1487678278 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          ->G [Show Flanks]
          Chromosome:
          6:31659358 (GRCh38)
          6:31627136 (GRCh37)
          Canonical SPDI:
          NC_000006.12:31659358:GGG:GGGG
          Gene:
          C6orf47 (Varview)
          Functional Consequence:
          coding_sequence_variant,frameshift_variant
          Validated:
          by frequency
          MAF:
          G=0.000004/1 (GnomAD_exomes)
          HGVS:
          7.

          rs1487259434 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>T [Show Flanks]
            Chromosome:
            6:31661225 (GRCh38)
            6:31629002 (GRCh37)
            Canonical SPDI:
            NC_000006.12:31661224:A:T
            Gene:
            GPANK1 (Varview), C6orf47 (Varview)
            Functional Consequence:
            downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
            Validated:
            by frequency,by alfa
            MAF:
            T=0.000071/1 (ALFA)
            T=0.000004/1 (TOPMED)
            HGVS:
            9.
            11.

            rs1486586090 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              6:31661158 (GRCh38)
              6:31628935 (GRCh37)
              Canonical SPDI:
              NC_000006.12:31661157:C:T
              Gene:
              GPANK1 (Varview), C6orf47 (Varview)
              Functional Consequence:
              downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              T=0.000007/1 (GnomAD)
              T=0.000008/2 (TOPMED)
              HGVS:
              12.

              rs1485304343 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>G [Show Flanks]
                Chromosome:
                6:31660570 (GRCh38)
                6:31628347 (GRCh37)
                Canonical SPDI:
                NC_000006.12:31660569:C:G
                Gene:
                C6orf47 (Varview)
                Functional Consequence:
                5_prime_UTR_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                G=0./0 (ALFA)
                G=0.000004/1 (TOPMED)
                G=0.000007/1 (GnomAD)
                HGVS:
                14.

                rs1484463268 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A [Show Flanks]
                  Chromosome:
                  6:31662607 (GRCh38)
                  6:31630384 (GRCh37)
                  Canonical SPDI:
                  NC_000006.12:31662606:G:A
                  Gene:
                  GPANK1 (Varview), C6orf47 (Varview)
                  Functional Consequence:
                  coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  A=0.000028/1 (ALFA)
                  A=0.000004/1 (TOPMED)
                  A=0.000007/1 (GnomAD)
                  HGVS:
                  NC_000006.12:g.31662607G>A, NC_000006.11:g.31630384G>A, NT_113891.3:g.3139897G>A, NT_113891.2:g.3140003G>A, NT_167248.2:g.2918430G>A, NT_167248.1:g.2924026G>A, NT_167245.2:g.2910378G>A, NT_167245.1:g.2915963G>A, NT_167249.2:g.2961889G>A, NT_167249.1:g.2961187G>A, NT_167246.2:g.2967654G>A, NT_167246.1:g.2973274G>A, NT_167247.2:g.3004479G>A, NT_167247.1:g.3010064G>A, XM_005249403.4:c.730C>T, XM_005249403.3:c.730C>T, XM_005249403.2:c.730C>T, XM_005249403.1:c.730C>T, NM_033177.4:c.730C>T, NM_033177.3:c.730C>T, XM_011514909.2:c.730C>T, XM_011514909.1:c.730C>T, XM_011514910.2:c.730C>T, XM_011514910.1:c.730C>T, XM_024446549.2:c.730C>T, XM_024446549.1:c.730C>T, XM_047419350.1:c.730C>T, NM_001199237.1:c.730C>T, NM_001199238.1:c.730C>T, NM_001199239.1:c.730C>T, NM_001199240.1:c.730C>T, XM_047419351.1:c.730C>T, XM_006715204.2:c.730C>T, XM_006715204.1:c.730C>T, XP_005249460.1:p.Pro244Ser, NP_149417.1:p.Pro244Ser, XP_011513211.1:p.Pro244Ser, XP_011513212.1:p.Pro244Ser, XP_024302317.1:p.Pro244Ser, XP_047275306.1:p.Pro244Ser, NP_001186166.1:p.Pro244Ser, NP_001186167.1:p.Pro244Ser, NP_001186168.1:p.Pro244Ser, NP_001186169.1:p.Pro244Ser, XP_047275307.1:p.Pro244Ser, XP_006715267.1:p.Pro244Ser
                  16.

                  rs1483077434 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    A>C [Show Flanks]
                    Chromosome:
                    6:31658605 (GRCh38)
                    6:31626382 (GRCh37)
                    Canonical SPDI:
                    NC_000006.12:31658604:A:C
                    Gene:
                    APOM (Varview), C6orf47 (Varview)
                    Functional Consequence:
                    downstream_transcript_variant,3_prime_UTR_variant,500B_downstream_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    C=0./0 (ALFA)
                    HGVS:
                    17.

                    rs1482805033 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>G [Show Flanks]
                      Chromosome:
                      6:31659110 (GRCh38)
                      6:31626887 (GRCh37)
                      Canonical SPDI:
                      NC_000006.12:31659109:C:G
                      Gene:
                      C6orf47 (Varview)
                      Functional Consequence:
                      coding_sequence_variant,missense_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0.000071/1 (ALFA)
                      G=0.000019/5 (TOPMED)
                      G=0.000021/3 (GnomAD)
                      HGVS:
                      18.

                      rs1482751085 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        C>A [Show Flanks]
                        Chromosome:
                        6:31658028 (GRCh38)
                        6:31625805 (GRCh37)
                        Canonical SPDI:
                        NC_000006.12:31658027:C:A
                        Gene:
                        APOM (Varview), C6orf47 (Varview)
                        Functional Consequence:
                        downstream_transcript_variant,500B_downstream_variant,intron_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        A=0./0 (ALFA)
                        A=0.000004/1 (TOPMED)
                        HGVS:
                        20.

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