SNP Links for Gene (Select 57226) - SNP

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Select item 14914497701.

rs1491449770 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 6:89636111 (GRCh38)
6:90345831 (GRCh37)
Canonical SPDI:: NC_000006.12:89636111:A:AA
Gene:: LYRM2 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.89636112dup, NC_000006.11:g.90345831dup, NM_020466.5:c.*1161dup, NM_020466.4:c.*1161dup, NR_028493.2:n.1614dup, NR_028493.1:n.1626dup, NR_028494.2:n.1597dup, NR_028494.1:n.1609dup, NR_028495.2:n.1465dup, NR_028495.1:n.1477dup

Select item 14912763452.

rs1491276345 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 6:89632330 (GRCh38)
6:90342050 (GRCh37)
Canonical SPDI:: NC_000006.12:89632330:A:AA
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.89632331dup, NC_000006.11:g.90342050dup, NM_020466.5:c.*4942dup, NM_020466.4:c.*4942dup, NM_014942.4:c.*1327dup, XM_005248679.4:c.*1327dup, XM_005248679.3:c.*1327dup, XM_005248682.4:c.*1327dup, XM_005248682.3:c.*1327dup, XM_005248683.4:c.*1327dup, XM_005248683.3:c.*1327dup, XM_005248684.4:c.*1327dup, XM_005248684.3:c.*1327dup, XM_017010496.3:c.*1327dup, XM_017010496.2:c.*1327dup, XM_017010496.1:c.*1327dup, XM_017010502.3:c.*1327dup, XM_017010502.2:c.*1327dup, XM_017010502.1:c.*1327dup, XM_005248681.3:c.*1327dup, XM_005248681.2:c.*1327dup, XM_017010511.3:c.*1327dup, XM_017010511.2:c.*1327dup, XM_017010511.1:c.*1327dup, XM_011535597.3:c.*1327dup, XM_011535597.2:c.*1327dup, XM_011535596.3:c.*1327dup, XM_011535596.2:c.*1327dup, XM_024446357.2:c.*1327dup, XM_024446357.1:c.*1327dup, XM_024446358.2:c.*1327dup, XM_024446358.1:c.*1327dup, XM_024446359.2:c.*1327dup, XM_024446359.1:c.*1327dup, XM_024446360.2:c.*1327dup, XM_024446360.1:c.*1327dup, XM_024446361.2:c.*1327dup, XM_024446361.1:c.*1327dup, XM_024446362.2:c.*1327dup, XM_024446362.1:c.*1327dup, XM_017010503.2:c.*1327dup, XM_017010503.1:c.*1327dup, XM_024446363.2:c.*1327dup, XM_024446363.1:c.*1327dup, XM_024446365.2:c.*1327dup, XM_024446365.1:c.*1327dup, XM_024446364.2:c.*1327dup, XM_024446364.1:c.*1327dup, NR_028493.2:n.5395dup, NR_028493.1:n.5407dup, NR_028494.2:n.5378dup, NR_028494.1:n.5390dup, XM_017010508.2:c.*1327dup, XM_017010508.1:c.*1327dup, XM_024446366.2:c.*1327dup, XM_024446366.1:c.*1327dup, NM_001242809.2:c.*1327dup, NM_001242809.1:c.*1327dup, NR_028495.2:n.5246dup, NR_028495.1:n.5258dup, XM_024446368.2:c.*1327dup, XM_024446368.1:c.*1327dup, XM_017010493.2:c.*1327dup, XM_017010493.1:c.*1327dup, XM_017010494.2:c.*1327dup, XM_017010494.1:c.*1327dup, XM_017010499.2:c.*1327dup, XM_017010499.1:c.*1327dup, XM_017010500.2:c.*1327dup, XM_017010500.1:c.*1327dup, XM_017010513.2:c.*1327dup, XM_017010513.1:c.*1327dup, NM_001242811.1:c.*1327dup, XM_047418399.1:c.*1327dup, XM_047418400.1:c.*1327dup, XM_047418404.1:c.*1327dup, XM_047418407.1:c.*1327dup, XM_047418398.1:c.*1327dup, XM_047418402.1:c.*1327dup, XM_047418401.1:c.*1327dup, NM_001242813.1:c.*1327dup, XM_047418405.1:c.*1327dup, XM_047418397.1:c.*1327dup, XM_047418411.1:c.*1327dup, XM_047418408.1:c.*1327dup, XM_047418410.1:c.*1327dup, XM_047418412.1:c.*1327dup, NM_001242814.1:c.*1327dup, XM_047418409.1:c.*1327dup, XM_047418406.1:c.*1327dup, XM_047418413.1:c.*1327dup, XM_047418415.1:c.*1327dup, XM_047418414.1:c.*1327dup

Select item 14911683913.

rs1491168391 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 6:89632332 (GRCh38)
6:90342051 (GRCh37)
Canonical SPDI:: NC_000006.12:89632329:TATA:TA
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATA=0./0 (ALFA)
-=0./0 (GnomAD)
-=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.89632330TA[1], NC_000006.11:g.90342049TA[1], NM_020466.5:c.*4940TA[1], NM_020466.4:c.*4940TA[1], NM_014942.4:c.*1326TA[1], XM_005248679.4:c.*1326TA[1], XM_005248679.3:c.*1326TA[1], XM_005248682.4:c.*1326TA[1], XM_005248682.3:c.*1326TA[1], XM_005248683.4:c.*1326TA[1], XM_005248683.3:c.*1326TA[1], XM_005248684.4:c.*1326TA[1], XM_005248684.3:c.*1326TA[1], XM_017010496.3:c.*1326TA[1], XM_017010496.2:c.*1326TA[1], XM_017010496.1:c.*1326TA[1], XM_017010502.3:c.*1326TA[1], XM_017010502.2:c.*1326TA[1], XM_017010502.1:c.*1326TA[1], XM_005248681.3:c.*1326TA[1], XM_005248681.2:c.*1326TA[1], XM_017010511.3:c.*1326TA[1], XM_017010511.2:c.*1326TA[1], XM_017010511.1:c.*1326TA[1], XM_011535597.3:c.*1326TA[1], XM_011535597.2:c.*1326TA[1], XM_011535596.3:c.*1326TA[1], XM_011535596.2:c.*1326TA[1], XM_024446357.2:c.*1326TA[1], XM_024446357.1:c.*1326TA[1], XM_024446358.2:c.*1326TA[1], XM_024446358.1:c.*1326TA[1], XM_024446359.2:c.*1326TA[1], XM_024446359.1:c.*1326TA[1], XM_024446360.2:c.*1326TA[1], XM_024446360.1:c.*1326TA[1], XM_024446361.2:c.*1326TA[1], XM_024446361.1:c.*1326TA[1], XM_024446362.2:c.*1326TA[1], XM_024446362.1:c.*1326TA[1], XM_017010503.2:c.*1326TA[1], XM_017010503.1:c.*1326TA[1], XM_024446363.2:c.*1326TA[1], XM_024446363.1:c.*1326TA[1], XM_024446365.2:c.*1326TA[1], XM_024446365.1:c.*1326TA[1], XM_024446364.2:c.*1326TA[1], XM_024446364.1:c.*1326TA[1], NR_028493.2:n.5393TA[1], NR_028493.1:n.5405TA[1], NR_028494.2:n.5376TA[1], NR_028494.1:n.5388TA[1], XM_017010508.2:c.*1326TA[1], XM_017010508.1:c.*1326TA[1], XM_024446366.2:c.*1326TA[1], XM_024446366.1:c.*1326TA[1], NM_001242809.2:c.*1326TA[1], NM_001242809.1:c.*1326TA[1], NR_028495.2:n.5244TA[1], NR_028495.1:n.5256TA[1], XM_024446368.2:c.*1326TA[1], XM_024446368.1:c.*1326TA[1], XM_017010493.2:c.*1326TA[1], XM_017010493.1:c.*1326TA[1], XM_017010494.2:c.*1326TA[1], XM_017010494.1:c.*1326TA[1], XM_017010499.2:c.*1326TA[1], XM_017010499.1:c.*1326TA[1], XM_017010500.2:c.*1326TA[1], XM_017010500.1:c.*1326TA[1], XM_017010513.2:c.*1326TA[1], XM_017010513.1:c.*1326TA[1], NM_001242811.1:c.*1326TA[1], XM_047418399.1:c.*1326TA[1], XM_047418400.1:c.*1326TA[1], XM_047418404.1:c.*1326TA[1], XM_047418407.1:c.*1326TA[1], XM_047418398.1:c.*1326TA[1], XM_047418402.1:c.*1326TA[1], XM_047418401.1:c.*1326TA[1], NM_001242813.1:c.*1326TA[1], XM_047418405.1:c.*1326TA[1], XM_047418397.1:c.*1326TA[1], XM_047418411.1:c.*1326TA[1], XM_047418408.1:c.*1326TA[1], XM_047418410.1:c.*1326TA[1], XM_047418412.1:c.*1326TA[1], NM_001242814.1:c.*1326TA[1], XM_047418409.1:c.*1326TA[1], XM_047418406.1:c.*1326TA[1], XM_047418413.1:c.*1326TA[1], XM_047418415.1:c.*1326TA[1], XM_047418414.1:c.*1326TA[1]

Select item 14910925334.

rs1491092533 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 6:89636111 (GRCh38)
6:90345830 (GRCh37)
Canonical SPDI:: NC_000006.12:89636110:CA:
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000034/9 (TOPMED)
-=0.00005/7 (GnomAD)
HGVS:: NC_000006.12:g.89636111_89636112del, NC_000006.11:g.90345830_90345831del, NM_020466.5:c.*1161_*1162del, NM_020466.4:c.*1161_*1162del, NR_028493.2:n.1614_1615del, NR_028493.1:n.1626_1627del, NR_028494.2:n.1597_1598del, NR_028494.1:n.1609_1610del, NR_028495.2:n.1465_1466del, NR_028495.1:n.1477_1478del

Select item 14910880625.

rs1491088062 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATTATTTCT [Show Flanks]
Chromosome:: 6:89636626 (GRCh38)
6:90346346 (GRCh37)
Canonical SPDI:: NC_000006.12:89636626:TATTATTTCT:TATTATTTCTATTATTTCT
Gene:: LYRM2 (Varview), MDN1-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATTATTTCTATTATTTCT=0./0 (ALFA)
TATTATTTC=0.000011/3 (TOPMED)
TATTATTTC=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.89636628_89636636dup, NC_000006.11:g.90346347_90346355dup, NM_020466.5:c.*638_*646dup, NM_020466.4:c.*638_*646dup, NR_028493.2:n.1091_1099dup, NR_028493.1:n.1103_1111dup, NR_028494.2:n.1074_1082dup, NR_028494.1:n.1086_1094dup, NR_028495.2:n.942_950dup, NR_028495.1:n.954_962dup

Select item 14908711796.

rs1490871179 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 6:89635834 (GRCh38)
6:90345553 (GRCh37)
Canonical SPDI:: NC_000006.12:89635833:G:C
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.89635834G>C, NC_000006.11:g.90345553G>C, NM_020466.5:c.*1439C>G, NM_020466.4:c.*1439C>G, NR_028493.2:n.1892C>G, NR_028493.1:n.1904C>G, NR_028494.2:n.1875C>G, NR_028494.1:n.1887C>G, NR_028495.2:n.1743C>G, NR_028495.1:n.1755C>G

Select item 14905040607.

rs1490504060 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:89634823 (GRCh38)
6:90344542 (GRCh37)
Canonical SPDI:: NC_000006.12:89634822:T:A
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.89634823T>A, NC_000006.11:g.90344542T>A, NM_020466.5:c.*2450A>T, NM_020466.4:c.*2450A>T, NR_028493.2:n.2903A>T, NR_028493.1:n.2915A>T, NR_028494.2:n.2886A>T, NR_028494.1:n.2898A>T, NR_028495.2:n.2754A>T, NR_028495.1:n.2766A>T

Select item 14901780738.

rs1490178073 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAG>- [Show Flanks]
Chromosome:: 6:89635746 (GRCh38)
6:90345465 (GRCh37)
Canonical SPDI:: NC_000006.12:89635744:GAAG:G
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.89635746_89635748del, NC_000006.11:g.90345465_90345467del, NM_020466.5:c.*1526_*1528del, NM_020466.4:c.*1526_*1528del, NR_028493.2:n.1979_1981del, NR_028493.1:n.1991_1993del, NR_028494.2:n.1962_1964del, NR_028494.1:n.1974_1976del, NR_028495.2:n.1830_1832del, NR_028495.1:n.1842_1844del

Select item 14901077669.

rs1490107766 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:89637729 (GRCh38)
6:90347448 (GRCh37)
Canonical SPDI:: NC_000006.12:89637728:A:C
Gene:: LYRM2 (Varview), MDN1-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.89637729A>C, NC_000006.11:g.90347448A>C, NR_028493.2:n.368T>G, NR_028493.1:n.380T>G

Select item 148965048810.

rs1489650488 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:89636230 (GRCh38)
6:90345949 (GRCh37)
Canonical SPDI:: NC_000006.12:89636229:A:G
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.89636230A>G, NC_000006.11:g.90345949A>G, NM_020466.5:c.*1043T>C, NM_020466.4:c.*1043T>C, NR_028493.2:n.1496T>C, NR_028493.1:n.1508T>C, NR_028494.2:n.1479T>C, NR_028494.1:n.1491T>C, NR_028495.2:n.1347T>C, NR_028495.1:n.1359T>C

Select item 148954788911.

rs1489547889 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 6:89636728 (GRCh38)
6:90346448 (GRCh37)
Canonical SPDI:: NC_000006.12:89636728:AA:AAA
Gene:: LYRM2 (Varview), MDN1-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.89636730dup, NC_000006.11:g.90346449dup, NM_020466.5:c.*544dup, NM_020466.4:c.*544dup, NR_028493.2:n.997dup, NR_028493.1:n.1009dup, NR_028494.2:n.980dup, NR_028494.1:n.992dup, NR_028495.2:n.848dup, NR_028495.1:n.860dup

Select item 148940337712.

rs1489403377 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 6:89640306 (GRCh38)
6:90350025 (GRCh37)
Canonical SPDI:: NC_000006.12:89640305:A:C,NC_000006.12:89640305:A:G
Gene:: LYRM2 (Varview), MDN1-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.89640306A>C, NC_000006.12:g.89640306A>G, NC_000006.11:g.90350025A>C, NC_000006.11:g.90350025A>G

Select item 148915386613.

rs1489153866 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 6:89632980 (GRCh38)
6:90342699 (GRCh37)
Canonical SPDI:: NC_000006.12:89632979:G:A,NC_000006.12:89632979:G:C
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.89632980G>A, NC_000006.12:g.89632980G>C, NC_000006.11:g.90342699G>A, NC_000006.11:g.90342699G>C, NM_020466.5:c.*4293C>T, NM_020466.5:c.*4293C>G, NM_020466.4:c.*4293C>T, NM_020466.4:c.*4293C>G, NM_014942.4:c.*1976G>A, NM_014942.4:c.*1976G>C, XM_005248679.4:c.*1976G>A, XM_005248679.4:c.*1976G>C, XM_005248679.3:c.*1976G>A, XM_005248679.3:c.*1976G>C, XM_005248682.4:c.*1976G>A, XM_005248682.4:c.*1976G>C, XM_005248682.3:c.*1976G>A, XM_005248682.3:c.*1976G>C, XM_005248683.4:c.*1976G>A, XM_005248683.4:c.*1976G>C, XM_005248683.3:c.*1976G>A, XM_005248683.3:c.*1976G>C, XM_005248684.4:c.*1976G>A, XM_005248684.4:c.*1976G>C, XM_005248684.3:c.*1976G>A, XM_005248684.3:c.*1976G>C, XM_017010496.3:c.*1976G>A, XM_017010496.3:c.*1976G>C, XM_017010496.2:c.*1976G>A, XM_017010496.2:c.*1976G>C, XM_017010496.1:c.*1976G>A, XM_017010496.1:c.*1976G>C, XM_017010502.3:c.*1976G>A, XM_017010502.3:c.*1976G>C, XM_017010502.2:c.*1976G>A, XM_017010502.2:c.*1976G>C, XM_017010502.1:c.*1976G>A, XM_017010502.1:c.*1976G>C, XM_005248681.3:c.*1976G>A, XM_005248681.3:c.*1976G>C, XM_005248681.2:c.*1976G>A, XM_005248681.2:c.*1976G>C, XM_017010511.3:c.*1976G>A, XM_017010511.3:c.*1976G>C, XM_017010511.2:c.*1976G>A, XM_017010511.2:c.*1976G>C, XM_017010511.1:c.*1976G>A, XM_017010511.1:c.*1976G>C, XM_011535597.3:c.*1976G>A, XM_011535597.3:c.*1976G>C, XM_011535597.2:c.*1976G>A, XM_011535597.2:c.*1976G>C, XM_011535596.3:c.*1976G>A, XM_011535596.3:c.*1976G>C, XM_011535596.2:c.*1976G>A, XM_011535596.2:c.*1976G>C, XM_024446357.2:c.*1976G>A, XM_024446357.2:c.*1976G>C, XM_024446357.1:c.*1976G>A, XM_024446357.1:c.*1976G>C, XM_024446358.2:c.*1976G>A, XM_024446358.2:c.*1976G>C, XM_024446358.1:c.*1976G>A, XM_024446358.1:c.*1976G>C, XM_024446359.2:c.*1976G>A, XM_024446359.2:c.*1976G>C, XM_024446359.1:c.*1976G>A, XM_024446359.1:c.*1976G>C, XM_024446360.2:c.*1976G>A, XM_024446360.2:c.*1976G>C, XM_024446360.1:c.*1976G>A, XM_024446360.1:c.*1976G>C, XM_024446361.2:c.*1976G>A, XM_024446361.2:c.*1976G>C, XM_024446361.1:c.*1976G>A, XM_024446361.1:c.*1976G>C, XM_024446362.2:c.*1976G>A, XM_024446362.2:c.*1976G>C, XM_024446362.1:c.*1976G>A, XM_024446362.1:c.*1976G>C, XM_017010503.2:c.*1976G>A, XM_017010503.2:c.*1976G>C, XM_017010503.1:c.*1976G>A, XM_017010503.1:c.*1976G>C, XM_024446363.2:c.*1976G>A, XM_024446363.2:c.*1976G>C, XM_024446363.1:c.*1976G>A, XM_024446363.1:c.*1976G>C, XM_024446365.2:c.*1976G>A, XM_024446365.2:c.*1976G>C, XM_024446365.1:c.*1976G>A, XM_024446365.1:c.*1976G>C, XM_024446364.2:c.*1976G>A, XM_024446364.2:c.*1976G>C, XM_024446364.1:c.*1976G>A, XM_024446364.1:c.*1976G>C, NR_028493.2:n.4746C>T, NR_028493.2:n.4746C>G, NR_028493.1:n.4758C>T, NR_028493.1:n.4758C>G, NR_028494.2:n.4729C>T, NR_028494.2:n.4729C>G, NR_028494.1:n.4741C>T, NR_028494.1:n.4741C>G, XM_017010508.2:c.*1976G>A, XM_017010508.2:c.*1976G>C, XM_017010508.1:c.*1976G>A, XM_017010508.1:c.*1976G>C, XM_024446366.2:c.*1976G>A, XM_024446366.2:c.*1976G>C, XM_024446366.1:c.*1976G>A, XM_024446366.1:c.*1976G>C, NM_001242809.2:c.*1976G>A, NM_001242809.2:c.*1976G>C, NM_001242809.1:c.*1976G>A, NM_001242809.1:c.*1976G>C, NR_028495.2:n.4597C>T, NR_028495.2:n.4597C>G, NR_028495.1:n.4609C>T, NR_028495.1:n.4609C>G, XM_024446368.2:c.*1976G>A, XM_024446368.2:c.*1976G>C, XM_024446368.1:c.*1976G>A, XM_024446368.1:c.*1976G>C, XM_017010493.2:c.*1976G>A, XM_017010493.2:c.*1976G>C, XM_017010493.1:c.*1976G>A, XM_017010493.1:c.*1976G>C, XM_017010494.2:c.*1976G>A, XM_017010494.2:c.*1976G>C, XM_017010494.1:c.*1976G>A, XM_017010494.1:c.*1976G>C, XM_017010499.2:c.*1976G>A, XM_017010499.2:c.*1976G>C, XM_017010499.1:c.*1976G>A, XM_017010499.1:c.*1976G>C, XM_017010500.2:c.*1976G>A, XM_017010500.2:c.*1976G>C, XM_017010500.1:c.*1976G>A, XM_017010500.1:c.*1976G>C, XM_017010513.2:c.*1976G>A, XM_017010513.2:c.*1976G>C, XM_017010513.1:c.*1976G>A, XM_017010513.1:c.*1976G>C, NM_001242811.1:c.*1976G>A, NM_001242811.1:c.*1976G>C, XM_047418399.1:c.*1976G>A, XM_047418399.1:c.*1976G>C, XM_047418400.1:c.*1976G>A, XM_047418400.1:c.*1976G>C, XM_047418404.1:c.*1976G>A, XM_047418404.1:c.*1976G>C, XM_047418407.1:c.*1976G>A, XM_047418407.1:c.*1976G>C, XM_047418398.1:c.*1976G>A, XM_047418398.1:c.*1976G>C, XM_047418402.1:c.*1976G>A, XM_047418402.1:c.*1976G>C, XM_047418401.1:c.*1976G>A, XM_047418401.1:c.*1976G>C, NM_001242813.1:c.*1976G>A, NM_001242813.1:c.*1976G>C, XM_047418405.1:c.*1976G>A, XM_047418405.1:c.*1976G>C, XM_047418397.1:c.*1976G>A, XM_047418397.1:c.*1976G>C, XM_047418411.1:c.*1976G>A, XM_047418411.1:c.*1976G>C, XM_047418408.1:c.*1976G>A, XM_047418408.1:c.*1976G>C, XM_047418410.1:c.*1976G>A, XM_047418410.1:c.*1976G>C, XM_047418412.1:c.*1976G>A, XM_047418412.1:c.*1976G>C, NM_001242814.1:c.*1976G>A, NM_001242814.1:c.*1976G>C, XM_047418409.1:c.*1976G>A, XM_047418409.1:c.*1976G>C, XM_047418406.1:c.*1976G>A, XM_047418406.1:c.*1976G>C, XM_047418413.1:c.*1976G>A, XM_047418413.1:c.*1976G>C, XM_047418415.1:c.*1976G>A, XM_047418415.1:c.*1976G>C, XM_047418414.1:c.*1976G>A, XM_047418414.1:c.*1976G>C

Select item 148882924314.

rs1488829243 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:89632543 (GRCh38)
6:90342262 (GRCh37)
Canonical SPDI:: NC_000006.12:89632542:A:G
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000006.12:g.89632543A>G, NC_000006.11:g.90342262A>G, NM_020466.5:c.*4730T>C, NM_020466.4:c.*4730T>C, NM_014942.4:c.*1539A>G, XM_005248679.4:c.*1539A>G, XM_005248679.3:c.*1539A>G, XM_005248682.4:c.*1539A>G, XM_005248682.3:c.*1539A>G, XM_005248683.4:c.*1539A>G, XM_005248683.3:c.*1539A>G, XM_005248684.4:c.*1539A>G, XM_005248684.3:c.*1539A>G, XM_017010496.3:c.*1539A>G, XM_017010496.2:c.*1539A>G, XM_017010496.1:c.*1539A>G, XM_017010502.3:c.*1539A>G, XM_017010502.2:c.*1539A>G, XM_017010502.1:c.*1539A>G, XM_005248681.3:c.*1539A>G, XM_005248681.2:c.*1539A>G, XM_017010511.3:c.*1539A>G, XM_017010511.2:c.*1539A>G, XM_017010511.1:c.*1539A>G, XM_011535597.3:c.*1539A>G, XM_011535597.2:c.*1539A>G, XM_011535596.3:c.*1539A>G, XM_011535596.2:c.*1539A>G, XM_024446357.2:c.*1539A>G, XM_024446357.1:c.*1539A>G, XM_024446358.2:c.*1539A>G, XM_024446358.1:c.*1539A>G, XM_024446359.2:c.*1539A>G, XM_024446359.1:c.*1539A>G, XM_024446360.2:c.*1539A>G, XM_024446360.1:c.*1539A>G, XM_024446361.2:c.*1539A>G, XM_024446361.1:c.*1539A>G, XM_024446362.2:c.*1539A>G, XM_024446362.1:c.*1539A>G, XM_017010503.2:c.*1539A>G, XM_017010503.1:c.*1539A>G, XM_024446363.2:c.*1539A>G, XM_024446363.1:c.*1539A>G, XM_024446365.2:c.*1539A>G, XM_024446365.1:c.*1539A>G, XM_024446364.2:c.*1539A>G, XM_024446364.1:c.*1539A>G, NR_028493.2:n.5183T>C, NR_028493.1:n.5195T>C, NR_028494.2:n.5166T>C, NR_028494.1:n.5178T>C, XM_017010508.2:c.*1539A>G, XM_017010508.1:c.*1539A>G, XM_024446366.2:c.*1539A>G, XM_024446366.1:c.*1539A>G, NM_001242809.2:c.*1539A>G, NM_001242809.1:c.*1539A>G, NR_028495.2:n.5034T>C, NR_028495.1:n.5046T>C, XM_024446368.2:c.*1539A>G, XM_024446368.1:c.*1539A>G, XM_017010493.2:c.*1539A>G, XM_017010493.1:c.*1539A>G, XM_017010494.2:c.*1539A>G, XM_017010494.1:c.*1539A>G, XM_017010499.2:c.*1539A>G, XM_017010499.1:c.*1539A>G, XM_017010500.2:c.*1539A>G, XM_017010500.1:c.*1539A>G, XM_017010513.2:c.*1539A>G, XM_017010513.1:c.*1539A>G, NM_001242811.1:c.*1539A>G, XM_047418399.1:c.*1539A>G, XM_047418400.1:c.*1539A>G, XM_047418404.1:c.*1539A>G, XM_047418407.1:c.*1539A>G, XM_047418398.1:c.*1539A>G, XM_047418402.1:c.*1539A>G, XM_047418401.1:c.*1539A>G, NM_001242813.1:c.*1539A>G, XM_047418405.1:c.*1539A>G, XM_047418397.1:c.*1539A>G, XM_047418411.1:c.*1539A>G, XM_047418408.1:c.*1539A>G, XM_047418410.1:c.*1539A>G, XM_047418412.1:c.*1539A>G, NM_001242814.1:c.*1539A>G, XM_047418409.1:c.*1539A>G, XM_047418406.1:c.*1539A>G, XM_047418413.1:c.*1539A>G, XM_047418415.1:c.*1539A>G, XM_047418414.1:c.*1539A>G

Select item 148875069915.

rs1488750699 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:89634752 (GRCh38)
6:90344471 (GRCh37)
Canonical SPDI:: NC_000006.12:89634751:T:C
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000006.12:g.89634752T>C, NC_000006.11:g.90344471T>C, NM_020466.5:c.*2521A>G, NM_020466.4:c.*2521A>G, NR_028493.2:n.2974A>G, NR_028493.1:n.2986A>G, NR_028494.2:n.2957A>G, NR_028494.1:n.2969A>G, NR_028495.2:n.2825A>G, NR_028495.1:n.2837A>G

Select item 148868661616.

rs1488686616 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:89634078 (GRCh38)
6:90343797 (GRCh37)
Canonical SPDI:: NC_000006.12:89634077:A:G
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,3_prime_UTR_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.89634078A>G, NC_000006.11:g.90343797A>G, NM_020466.5:c.*3195T>C, NM_020466.4:c.*3195T>C, NR_028493.2:n.3648T>C, NR_028493.1:n.3660T>C, NR_028494.2:n.3631T>C, NR_028494.1:n.3643T>C, NR_028495.2:n.3499T>C, NR_028495.1:n.3511T>C

Select item 148868029617.

rs1488680296 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:89637208 (GRCh38)
6:90346927 (GRCh37)
Canonical SPDI:: NC_000006.12:89637207:A:G
Gene:: LYRM2 (Varview), MDN1-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
G=0.000546/1 (Korea1K)
G=0.001027/3 (KOREAN)
HGVS:: NC_000006.12:g.89637208A>G, NC_000006.11:g.90346927A>G, NM_020466.5:c.*65T>C, NM_020466.4:c.*65T>C, NR_028493.2:n.518T>C, NR_028493.1:n.530T>C, NR_028494.2:n.501T>C, NR_028494.1:n.513T>C, NR_028495.2:n.369T>C, NR_028495.1:n.381T>C

Select item 148865686418.

rs1488656864 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:89632863 (GRCh38)
6:90342582 (GRCh37)
Canonical SPDI:: NC_000006.12:89632862:A:C
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.89632863A>C, NC_000006.11:g.90342582A>C, NM_020466.5:c.*4410T>G, NM_020466.4:c.*4410T>G, NM_014942.4:c.*1859A>C, XM_005248679.4:c.*1859A>C, XM_005248679.3:c.*1859A>C, XM_005248682.4:c.*1859A>C, XM_005248682.3:c.*1859A>C, XM_005248683.4:c.*1859A>C, XM_005248683.3:c.*1859A>C, XM_005248684.4:c.*1859A>C, XM_005248684.3:c.*1859A>C, XM_017010496.3:c.*1859A>C, XM_017010496.2:c.*1859A>C, XM_017010496.1:c.*1859A>C, XM_017010502.3:c.*1859A>C, XM_017010502.2:c.*1859A>C, XM_017010502.1:c.*1859A>C, XM_005248681.3:c.*1859A>C, XM_005248681.2:c.*1859A>C, XM_017010511.3:c.*1859A>C, XM_017010511.2:c.*1859A>C, XM_017010511.1:c.*1859A>C, XM_011535597.3:c.*1859A>C, XM_011535597.2:c.*1859A>C, XM_011535596.3:c.*1859A>C, XM_011535596.2:c.*1859A>C, XM_024446357.2:c.*1859A>C, XM_024446357.1:c.*1859A>C, XM_024446358.2:c.*1859A>C, XM_024446358.1:c.*1859A>C, XM_024446359.2:c.*1859A>C, XM_024446359.1:c.*1859A>C, XM_024446360.2:c.*1859A>C, XM_024446360.1:c.*1859A>C, XM_024446361.2:c.*1859A>C, XM_024446361.1:c.*1859A>C, XM_024446362.2:c.*1859A>C, XM_024446362.1:c.*1859A>C, XM_017010503.2:c.*1859A>C, XM_017010503.1:c.*1859A>C, XM_024446363.2:c.*1859A>C, XM_024446363.1:c.*1859A>C, XM_024446365.2:c.*1859A>C, XM_024446365.1:c.*1859A>C, XM_024446364.2:c.*1859A>C, XM_024446364.1:c.*1859A>C, NR_028493.2:n.4863T>G, NR_028493.1:n.4875T>G, NR_028494.2:n.4846T>G, NR_028494.1:n.4858T>G, XM_017010508.2:c.*1859A>C, XM_017010508.1:c.*1859A>C, XM_024446366.2:c.*1859A>C, XM_024446366.1:c.*1859A>C, NM_001242809.2:c.*1859A>C, NM_001242809.1:c.*1859A>C, NR_028495.2:n.4714T>G, NR_028495.1:n.4726T>G, XM_024446368.2:c.*1859A>C, XM_024446368.1:c.*1859A>C, XM_017010493.2:c.*1859A>C, XM_017010493.1:c.*1859A>C, XM_017010494.2:c.*1859A>C, XM_017010494.1:c.*1859A>C, XM_017010499.2:c.*1859A>C, XM_017010499.1:c.*1859A>C, XM_017010500.2:c.*1859A>C, XM_017010500.1:c.*1859A>C, XM_017010513.2:c.*1859A>C, XM_017010513.1:c.*1859A>C, NM_001242811.1:c.*1859A>C, XM_047418399.1:c.*1859A>C, XM_047418400.1:c.*1859A>C, XM_047418404.1:c.*1859A>C, XM_047418407.1:c.*1859A>C, XM_047418398.1:c.*1859A>C, XM_047418402.1:c.*1859A>C, XM_047418401.1:c.*1859A>C, NM_001242813.1:c.*1859A>C, XM_047418405.1:c.*1859A>C, XM_047418397.1:c.*1859A>C, XM_047418411.1:c.*1859A>C, XM_047418408.1:c.*1859A>C, XM_047418410.1:c.*1859A>C, XM_047418412.1:c.*1859A>C, NM_001242814.1:c.*1859A>C, XM_047418409.1:c.*1859A>C, XM_047418406.1:c.*1859A>C, XM_047418413.1:c.*1859A>C, XM_047418415.1:c.*1859A>C, XM_047418414.1:c.*1859A>C

Select item 148827898519.

rs1488278985 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:89634450 (GRCh38)
6:90344169 (GRCh37)
Canonical SPDI:: NC_000006.12:89634449:T:C,NC_000006.12:89634449:T:G
Gene:: LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.89634450T>C, NC_000006.12:g.89634450T>G, NC_000006.11:g.90344169T>C, NC_000006.11:g.90344169T>G, NM_020466.5:c.*2823A>G, NM_020466.5:c.*2823A>C, NM_020466.4:c.*2823A>G, NM_020466.4:c.*2823A>C, NR_028493.2:n.3276A>G, NR_028493.2:n.3276A>C, NR_028493.1:n.3288A>G, NR_028493.1:n.3288A>C, NR_028494.2:n.3259A>G, NR_028494.2:n.3259A>C, NR_028494.1:n.3271A>G, NR_028494.1:n.3271A>C, NR_028495.2:n.3127A>G, NR_028495.2:n.3127A>C, NR_028495.1:n.3139A>G, NR_028495.1:n.3139A>C

Select item 148817620320.

rs1488176203 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATTAGT>- [Show Flanks]
Chromosome:: 6:89633559 (GRCh38)
6:90343278 (GRCh37)
Canonical SPDI:: NC_000006.12:89633555:AGTATTAGT:AGT
Gene:: ANKRD6 (Varview), LYRM2 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AGT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.89633559_89633564del, NC_000006.11:g.90343278_90343283del, NM_020466.5:c.*3712_*3717del, NM_020466.4:c.*3712_*3717del, NM_014942.4:c.*2555_*2560del, XM_005248679.4:c.*2555_*2560del, XM_005248679.3:c.*2555_*2560del, XM_005248682.4:c.*2555_*2560del, XM_005248682.3:c.*2555_*2560del, XM_005248683.4:c.*2555_*2560del, XM_005248683.3:c.*2555_*2560del, XM_005248684.4:c.*2555_*2560del, XM_005248684.3:c.*2555_*2560del, XM_017010496.3:c.*2555_*2560del, XM_017010496.2:c.*2555_*2560del, XM_017010496.1:c.*2555_*2560del, XM_017010502.3:c.*2555_*2560del, XM_017010502.2:c.*2555_*2560del, XM_017010502.1:c.*2555_*2560del, XM_005248681.3:c.*2555_*2560del, XM_005248681.2:c.*2555_*2560del, XM_017010511.3:c.*2555_*2560del, XM_017010511.2:c.*2555_*2560del, XM_017010511.1:c.*2555_*2560del, XM_011535597.3:c.*2555_*2560del, XM_011535597.2:c.*2555_*2560del, XM_011535596.3:c.*2555_*2560del, XM_011535596.2:c.*2555_*2560del, XM_024446357.2:c.*2555_*2560del, XM_024446357.1:c.*2555_*2560del, XM_024446358.2:c.*2555_*2560del, XM_024446358.1:c.*2555_*2560del, XM_024446359.2:c.*2555_*2560del, XM_024446359.1:c.*2555_*2560del, XM_024446360.2:c.*2555_*2560del, XM_024446360.1:c.*2555_*2560del, XM_024446361.2:c.*2555_*2560del, XM_024446361.1:c.*2555_*2560del, XM_024446362.2:c.*2555_*2560del, XM_024446362.1:c.*2555_*2560del, XM_017010503.2:c.*2555_*2560del, XM_017010503.1:c.*2555_*2560del, XM_024446363.2:c.*2555_*2560del, XM_024446363.1:c.*2555_*2560del, XM_024446365.2:c.*2555_*2560del, XM_024446365.1:c.*2555_*2560del, XM_024446364.2:c.*2555_*2560del, XM_024446364.1:c.*2555_*2560del, NR_028493.2:n.4165_4170del, NR_028493.1:n.4177_4182del, NR_028494.2:n.4148_4153del, NR_028494.1:n.4160_4165del, XM_017010508.2:c.*2555_*2560del, XM_017010508.1:c.*2555_*2560del, XM_024446366.2:c.*2555_*2560del, XM_024446366.1:c.*2555_*2560del, NM_001242809.2:c.*2555_*2560del, NM_001242809.1:c.*2555_*2560del, NR_028495.2:n.4016_4021del, NR_028495.1:n.4028_4033del, XM_024446368.2:c.*2555_*2560del, XM_024446368.1:c.*2555_*2560del, XM_017010493.2:c.*2555_*2560del, XM_017010493.1:c.*2555_*2560del, XM_017010494.2:c.*2555_*2560del, XM_017010494.1:c.*2555_*2560del, XM_017010499.2:c.*2555_*2560del, XM_017010499.1:c.*2555_*2560del, XM_017010500.2:c.*2555_*2560del, XM_017010500.1:c.*2555_*2560del, XM_017010513.2:c.*2555_*2560del, XM_017010513.1:c.*2555_*2560del, NM_001242811.1:c.*2555_*2560del, XM_047418399.1:c.*2555_*2560del, XM_047418400.1:c.*2555_*2560del, XM_047418404.1:c.*2555_*2560del, XM_047418407.1:c.*2555_*2560del, XM_047418398.1:c.*2555_*2560del, XM_047418402.1:c.*2555_*2560del, XM_047418401.1:c.*2555_*2560del, NM_001242813.1:c.*2555_*2560del, XM_047418405.1:c.*2555_*2560del, XM_047418397.1:c.*2555_*2560del, XM_047418411.1:c.*2555_*2560del, XM_047418408.1:c.*2555_*2560del, XM_047418410.1:c.*2555_*2560del, XM_047418412.1:c.*2555_*2560del, NM_001242814.1:c.*2555_*2560del, XM_047418409.1:c.*2555_*2560del, XM_047418406.1:c.*2555_*2560del, XM_047418413.1:c.*2555_*2560del, XM_047418415.1:c.*2555_*2560del, XM_047418414.1:c.*2555_*2560del

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