Links from Gene
Items: 1 to 20 of 40042
1.
rs1491543708 has merged into rs763032227 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->A,AA
[Show Flanks]
- Chromosome:
- 6:138323632
(GRCh38)
6:138644770
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138323632:AA:AAA,NC_000006.12:138323632:AA:AAAA
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAA=0.005853/122
(
ALFA)
A=0.000209/29
(GnomAD)
A=0.00046/8
(TOMMO)
A=0.002744/5
(Korea1K)
A=0.004152/16
(ALSPAC)
A=0.005933/22
(TWINSUK)
- HGVS:
2.
rs1491471814 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AA>-
[Show Flanks]
- Chromosome:
- 6:138323633
(GRCh38)
6:138644770
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138323632:AA:
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.0086/32
(TWINSUK)
-=0.0099/38
(ALSPAC)
- HGVS:
3.
rs1491468837 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 6:138215842
(GRCh38)
6:138536980
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138215842:T:TT
- Gene:
- ARFGEF3 (Varview), PBOV1 (Varview)
- Functional Consequence:
- intron_variant,downstream_transcript_variant,genic_upstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa
- MAF:
TT=0./0
(
ALFA)
T=0.00042/2
(GnomAD)
- HGVS:
5.
rs1491441264 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TG>-
[Show Flanks]
- Chromosome:
- 6:138228194
(GRCh38)
6:138549331
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138228193:TG:
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.003288/39
(
ALFA)
-=0.000298/38
(GnomAD)
-=0.001106/31
(TOMMO)
- HGVS:
7.
rs1491275635 has merged into rs200662940 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CA>-,CACA
[Show Flanks]
- Chromosome:
- 6:138323635
(GRCh38)
6:138644772
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138323633:ACA:A,NC_000006.12:138323633:ACA:ACACA
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.02908/738
(
ALFA)
-=0.015049/58
(ALSPAC)
-=0.019417/72
(TWINSUK)
-=0.021667/13
(NorthernSweden)
-=0.027834/3882
(GnomAD)
-=0.032827/8689
(TOPMED)
-=0.034441/3688
(ExAC)
-=0.036062/8121
(GnomAD_exomes)
-=0.042942/275
(1000Genomes)
-=0.067822/849
(GoESP)
-=0.113537/208
(Korea1K)
-=0.128742/2156
(TOMMO)
- HGVS:
9.
rs1491254284 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 6:138215888
(GRCh38)
6:138537025
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138215887:GA:
- Gene:
- ARFGEF3 (Varview), PBOV1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00021/13
(GnomAD)
- HGVS:
10.
rs1491218259 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CG>-
[Show Flanks]
- Chromosome:
- 6:138234475
(GRCh38)
6:138555612
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138234474:CG:
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by cluster
- MAF:
-=0.0023/9
(ALSPAC)
-=0.0059/22
(TWINSUK)
- HGVS:
11.
rs1491166487 has merged into rs10642229 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTG>-,TG,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 6:138234491
(GRCh38)
6:138555628
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138234475:GTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGTGTGTGTGTG=0./0
(
ALFA)
-=0.5/4
(KOREAN)
- HGVS:
NC_000006.12:g.138234477TG[7], NC_000006.12:g.138234477TG[8], NC_000006.12:g.138234477TG[9], NC_000006.12:g.138234477TG[10], NC_000006.12:g.138234477TG[11], NC_000006.12:g.138234477TG[13], NC_000006.12:g.138234477TG[14], NC_000006.12:g.138234477TG[15], NC_000006.12:g.138234477TG[16], NC_000006.12:g.138234477TG[17], NC_000006.12:g.138234477TG[18], NC_000006.12:g.138234477TG[19], NC_000006.11:g.138555614TG[7], NC_000006.11:g.138555614TG[8], NC_000006.11:g.138555614TG[9], NC_000006.11:g.138555614TG[10], NC_000006.11:g.138555614TG[11], NC_000006.11:g.138555614TG[13], NC_000006.11:g.138555614TG[14], NC_000006.11:g.138555614TG[15], NC_000006.11:g.138555614TG[16], NC_000006.11:g.138555614TG[17], NC_000006.11:g.138555614TG[18], NC_000006.11:g.138555614TG[19]
12.
rs1491150439 has merged into rs71693484 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 6:138186912
(GRCh38)
6:138508049
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138186902:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000006.12:g.138186912_138186932del, NC_000006.12:g.138186914_138186932del, NC_000006.12:g.138186915_138186932del, NC_000006.12:g.138186916_138186932del, NC_000006.12:g.138186917_138186932del, NC_000006.12:g.138186918_138186932del, NC_000006.12:g.138186919_138186932del, NC_000006.12:g.138186920_138186932del, NC_000006.12:g.138186921_138186932del, NC_000006.12:g.138186922_138186932del, NC_000006.12:g.138186923_138186932del, NC_000006.12:g.138186924_138186932del, NC_000006.12:g.138186925_138186932del, NC_000006.12:g.138186926_138186932del, NC_000006.12:g.138186927_138186932del, NC_000006.12:g.138186928_138186932del, NC_000006.12:g.138186929_138186932del, NC_000006.12:g.138186930_138186932del, NC_000006.12:g.138186931_138186932del, NC_000006.12:g.138186932del, NC_000006.12:g.138186932dup, NC_000006.12:g.138186931_138186932dup, NC_000006.12:g.138186930_138186932dup, NC_000006.12:g.138186929_138186932dup, NC_000006.12:g.138186928_138186932dup, NC_000006.12:g.138186927_138186932dup, NC_000006.12:g.138186926_138186932dup, NC_000006.12:g.138186925_138186932dup, NC_000006.12:g.138186924_138186932dup, NC_000006.12:g.138186923_138186932dup, NC_000006.12:g.138186922_138186932dup, NC_000006.12:g.138186921_138186932dup, NC_000006.12:g.138186920_138186932dup, NC_000006.12:g.138186919_138186932dup, NC_000006.12:g.138186916_138186932dup, NC_000006.12:g.138186914_138186932dup, NC_000006.12:g.138186908_138186932dup, NC_000006.12:g.138186904_138186932dup, NC_000006.12:g.138186903_138186932dup, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.12:g.138186932_138186933insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508049_138508069del, NC_000006.11:g.138508051_138508069del, NC_000006.11:g.138508052_138508069del, NC_000006.11:g.138508053_138508069del, NC_000006.11:g.138508054_138508069del, NC_000006.11:g.138508055_138508069del, NC_000006.11:g.138508056_138508069del, NC_000006.11:g.138508057_138508069del, NC_000006.11:g.138508058_138508069del, NC_000006.11:g.138508059_138508069del, NC_000006.11:g.138508060_138508069del, NC_000006.11:g.138508061_138508069del, NC_000006.11:g.138508062_138508069del, NC_000006.11:g.138508063_138508069del, NC_000006.11:g.138508064_138508069del, NC_000006.11:g.138508065_138508069del, NC_000006.11:g.138508066_138508069del, NC_000006.11:g.138508067_138508069del, NC_000006.11:g.138508068_138508069del, NC_000006.11:g.138508069del, NC_000006.11:g.138508069dup, NC_000006.11:g.138508068_138508069dup, NC_000006.11:g.138508067_138508069dup, NC_000006.11:g.138508066_138508069dup, NC_000006.11:g.138508065_138508069dup, NC_000006.11:g.138508064_138508069dup, NC_000006.11:g.138508063_138508069dup, NC_000006.11:g.138508062_138508069dup, NC_000006.11:g.138508061_138508069dup, NC_000006.11:g.138508060_138508069dup, NC_000006.11:g.138508059_138508069dup, NC_000006.11:g.138508058_138508069dup, NC_000006.11:g.138508057_138508069dup, NC_000006.11:g.138508056_138508069dup, NC_000006.11:g.138508053_138508069dup, NC_000006.11:g.138508051_138508069dup, NC_000006.11:g.138508045_138508069dup, NC_000006.11:g.138508041_138508069dup, NC_000006.11:g.138508040_138508069dup, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000006.11:g.138508069_138508070insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
13.
rs1491094646 has merged into rs61141343 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG>-,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 6:138215851
(GRCh38)
6:138536988
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000006.12:138215841:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- ARFGEF3 (Varview), PBOV1 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGTGTGTGTGTGTG=0./0
(
ALFA)
- HGVS:
NC_000006.12:g.138215843TG[4], NC_000006.12:g.138215843TG[8], NC_000006.12:g.138215843TG[9], NC_000006.12:g.138215843TG[10], NC_000006.12:g.138215843TG[11], NC_000006.12:g.138215843TG[12], NC_000006.12:g.138215843TG[13], NC_000006.12:g.138215843TG[14], NC_000006.12:g.138215843TG[15], NC_000006.12:g.138215843TG[16], NC_000006.12:g.138215843TG[17], NC_000006.12:g.138215843TG[18], NC_000006.12:g.138215843TG[19], NC_000006.12:g.138215843TG[20], NC_000006.12:g.138215843TG[21], NC_000006.12:g.138215843TG[22], NC_000006.12:g.138215843TG[24], NC_000006.12:g.138215843TG[25], NC_000006.12:g.138215843TG[26], NC_000006.12:g.138215843TG[27], NC_000006.12:g.138215843TG[28], NC_000006.11:g.138536980TG[4], NC_000006.11:g.138536980TG[8], NC_000006.11:g.138536980TG[9], NC_000006.11:g.138536980TG[10], NC_000006.11:g.138536980TG[11], NC_000006.11:g.138536980TG[12], NC_000006.11:g.138536980TG[13], NC_000006.11:g.138536980TG[14], NC_000006.11:g.138536980TG[15], NC_000006.11:g.138536980TG[16], NC_000006.11:g.138536980TG[17], NC_000006.11:g.138536980TG[18], NC_000006.11:g.138536980TG[19], NC_000006.11:g.138536980TG[20], NC_000006.11:g.138536980TG[21], NC_000006.11:g.138536980TG[22], NC_000006.11:g.138536980TG[24], NC_000006.11:g.138536980TG[25], NC_000006.11:g.138536980TG[26], NC_000006.11:g.138536980TG[27], NC_000006.11:g.138536980TG[28], NG_029816.1:g.7604AC[4], NG_029816.1:g.7604AC[8], NG_029816.1:g.7604AC[9], NG_029816.1:g.7604AC[10], NG_029816.1:g.7604AC[11], NG_029816.1:g.7604AC[12], NG_029816.1:g.7604AC[13], NG_029816.1:g.7604AC[14], NG_029816.1:g.7604AC[15], NG_029816.1:g.7604AC[16], NG_029816.1:g.7604AC[17], NG_029816.1:g.7604AC[18], NG_029816.1:g.7604AC[19], NG_029816.1:g.7604AC[20], NG_029816.1:g.7604AC[21], NG_029816.1:g.7604AC[22], NG_029816.1:g.7604AC[24], NG_029816.1:g.7604AC[25], NG_029816.1:g.7604AC[26], NG_029816.1:g.7604AC[27], NG_029816.1:g.7604AC[28]
14.
rs1491076239 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 6:138243728
(GRCh38)
6:138564865
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138243727:AG:
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.000071/1
(
ALFA)
-=0.000015/4
(TOPMED)
-=0.000021/3
(GnomAD)
- HGVS:
15.
rs1491068839 has merged into rs56283991 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTTTTT
[Show Flanks]
- Chromosome:
- 6:138319133
(GRCh38)
6:138640270
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:138319118:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTTTTTTT=0./0
(
ALFA)
- HGVS:
NC_000006.12:g.138319133_138319135del, NC_000006.12:g.138319134_138319135del, NC_000006.12:g.138319135del, NC_000006.12:g.138319135dup, NC_000006.12:g.138319134_138319135dup, NC_000006.12:g.138319133_138319135dup, NC_000006.12:g.138319129_138319135dup, NC_000006.11:g.138640270_138640272del, NC_000006.11:g.138640271_138640272del, NC_000006.11:g.138640272del, NC_000006.11:g.138640272dup, NC_000006.11:g.138640271_138640272dup, NC_000006.11:g.138640270_138640272dup, NC_000006.11:g.138640266_138640272dup
16.
rs1491052300 has merged into rs66483625 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA,AAAAA
[Show Flanks]
- Chromosome:
- 6:138243727
(GRCh38)
6:138564864
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138243719:AAAAAAAAA:AAAAAAA,NC_000006.12:138243719:AAAAAAAAA:AAAAAAAA,NC_000006.12:138243719:AAAAAAAAA:AAAAAAAAAA,NC_000006.12:138243719:AAAAAAAAA:AAAAAAAAAAA,NC_000006.12:138243719:AAAAAAAAA:AAAAAAAAAAAA
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
A=0.075765/292
(ALSPAC)
A=0.090301/54
(NorthernSweden)
A=0.093186/93
(GoNL)
A=0.094121/349
(TWINSUK)
A=0.094843/423
(Estonian)
A=0.1/4
(GENOME_DK)
A=0.245407/1229
(1000Genomes)
A=0.40393/740
(Korea1K)
- HGVS:
17.
rs1491043417 has merged into rs11331667 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GGG>-,G,GG,GGGG,GGGGG
[Show Flanks]
- Chromosome:
- 6:138320952
(GRCh38)
6:138642089
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138320945:GGGGGGGGG:GGGGGG,NC_000006.12:138320945:GGGGGGGGG:GGGGGGG,NC_000006.12:138320945:GGGGGGGGG:GGGGGGGG,NC_000006.12:138320945:GGGGGGGGG:GGGGGGGGGG,NC_000006.12:138320945:GGGGGGGGG:GGGGGGGGGGG
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGGGGGG=0./0
(
ALFA)
-=0.005708/22
(ALSPAC)
G=0.063333/38
(NorthernSweden)
G=0.075/3
(GENOME_DK)
G=0.098044/431
(Estonian)
G=0.129185/34194
(TOPMED)
G=0.146454/733
(1000Genomes)
- HGVS:
18.
rs1491025567 has merged into rs549915422 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,TTTT,TTTTTT,TTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 6:138228182
(GRCh38)
6:138549319
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000006.12:138228172:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTT=0./0
(
ALFA)
TTTTTTTTTTTTT=0./0
(GENOME_DK)
-=0.0445/223
(1000Genomes)
- HGVS:
NC_000006.12:g.138228182_138228194del, NC_000006.12:g.138228186_138228194del, NC_000006.12:g.138228188_138228194del, NC_000006.12:g.138228189_138228194del, NC_000006.12:g.138228191_138228194del, NC_000006.12:g.138228192_138228194del, NC_000006.12:g.138228193_138228194del, NC_000006.12:g.138228194del, NC_000006.12:g.138228194dup, NC_000006.12:g.138228193_138228194dup, NC_000006.12:g.138228192_138228194dup, NC_000006.12:g.138228191_138228194dup, NC_000006.12:g.138228190_138228194dup, NC_000006.12:g.138228189_138228194dup, NC_000006.12:g.138228188_138228194dup, NC_000006.11:g.138549319_138549331del, NC_000006.11:g.138549323_138549331del, NC_000006.11:g.138549325_138549331del, NC_000006.11:g.138549326_138549331del, NC_000006.11:g.138549328_138549331del, NC_000006.11:g.138549329_138549331del, NC_000006.11:g.138549330_138549331del, NC_000006.11:g.138549331del, NC_000006.11:g.138549331dup, NC_000006.11:g.138549330_138549331dup, NC_000006.11:g.138549329_138549331dup, NC_000006.11:g.138549328_138549331dup, NC_000006.11:g.138549327_138549331dup, NC_000006.11:g.138549326_138549331dup, NC_000006.11:g.138549325_138549331dup
20.
rs1490965020 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- T>-
[Show Flanks]
- Chromosome:
- 6:138320926
(GRCh38)
6:138642063
(GRCh37)
- Canonical SPDI:
- NC_000006.12:138320925:TT:T
- Gene:
- ARFGEF3 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TT=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
- HGVS: