SNP Links for Gene (Select 56651) - SNP

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14914935061.

rs1491493506 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 18:1294198 (GRCh38)
18:1294200 (GRCh37)
Canonical SPDI:: NC_000018.10:1294198::G
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000018.10:g.1294198_1294199insG, NC_000018.9:g.1294199_1294200insG

Select item 14914326962.

rs1491432696 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: 18:1284028 (GRCh38)
18:1284029 (GRCh37)
Canonical SPDI:: NC_000018.10:1284027:GA:
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000018.10:g.1284028_1284029del, NC_000018.9:g.1284029_1284030del

Select item 14914319383.

rs1491431938 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 18:1294143 (GRCh38)
18:1294144 (GRCh37)
Canonical SPDI:: NC_000018.10:1294142:AT:
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00051/6 (ALFA)
-=0.00008/4 (GnomAD)
HGVS:: NC_000018.10:g.1294143_1294144del, NC_000018.9:g.1294144_1294145del

Select item 14913760824.

rs1491376082 has merged into rs1055810895 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGAG>-,AGAGAG [Show Flanks]
Chromosome:: 18:1334859 (GRCh38)
18:1334860 (GRCh37)
Canonical SPDI:: NC_000018.10:1334851:GAGAGAGAGAG:GAGAGAG,NC_000018.10:1334851:GAGAGAGAGAG:GAGAGAGAGAGAG
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGAGAGAGAGAG=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000019/5 (TOPMED)
HGVS:: NC_000018.10:g.1334853AG[3], NC_000018.10:g.1334853AG[6], NC_000018.9:g.1334854AG[3], NC_000018.9:g.1334854AG[6]

Select item 14913737835.

rs1491373783 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 18:1294199 (GRCh38)
18:1294200 (GRCh37)
Canonical SPDI:: NC_000018.10:1294197:TTT:T
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.00012/2 (ALFA)
-=0.00014/4 (TOMMO)
HGVS:: NC_000018.10:g.1294199_1294200del, NC_000018.9:g.1294200_1294201del

Select item 14913113466.

rs1491311346 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 18:1286806 (GRCh38)
18:1286808 (GRCh37)
Canonical SPDI:: NC_000018.10:1286806:C:CC
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.1286807dup, NC_000018.9:g.1286808dup

Select item 14912253377.

rs1491225337 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA [Show Flanks]
Chromosome:: 18:1347171 (GRCh38)
18:1347172 (GRCh37)
Canonical SPDI:: NC_000018.10:1347169:ATA:A,NC_000018.10:1347169:ATA:ATATA
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.004531/74 (ALFA)
-=0.000814/14 (TOMMO)
-=0.002515/348 (GnomAD)
-=0.006667/4 (NorthernSweden)
-=0.011463/21 (Korea1K)
-=0.059871/222 (TWINSUK)
-=0.0685/264 (ALSPAC)
HGVS:: NC_000018.10:g.1347171_1347172del, NC_000018.10:g.1347171_1347172dup, NC_000018.9:g.1347172_1347173del, NC_000018.9:g.1347172_1347173dup

Select item 14911697508.

rs1491169750 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: 18:1334851 (GRCh38)
18:1334852 (GRCh37)
Canonical SPDI:: NC_000018.10:1334850:TG:
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000018.10:g.1334851_1334852del, NC_000018.9:g.1334852_1334853del

Select item 14911549259.

rs1491154925 has merged into rs4036865 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACACACA>-,CACA,CACACA,CACACACA,CACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA [Show Flanks]
Chromosome:: 18:1347159 (GRCh38)
18:1347160 (GRCh37)
Canonical SPDI:: NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000018.10:1347145:ACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACACA=0./0 (ALFA)
HGVS:: NC_000018.10:g.1347147CA[6], NC_000018.10:g.1347147CA[8], NC_000018.10:g.1347147CA[9], NC_000018.10:g.1347147CA[10], NC_000018.10:g.1347147CA[11], NC_000018.10:g.1347147CA[13], NC_000018.10:g.1347147CA[14], NC_000018.10:g.1347147CA[15], NC_000018.10:g.1347147CA[16], NC_000018.10:g.1347147CA[17], NC_000018.9:g.1347148CA[6], NC_000018.9:g.1347148CA[8], NC_000018.9:g.1347148CA[9], NC_000018.9:g.1347148CA[10], NC_000018.9:g.1347148CA[11], NC_000018.9:g.1347148CA[13], NC_000018.9:g.1347148CA[14], NC_000018.9:g.1347148CA[15], NC_000018.9:g.1347148CA[16], NC_000018.9:g.1347148CA[17]

Select item 149113430210.

rs1491134302 has merged into rs59879202 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACACACACACACACACACACACACA>-,CA,CACA,CACACA,CACACACA,CACACACACA,CACACACACACA,CACACACACACACA,CACACACACACACACA,CACACACACACACACACA,CACACACACACACACACACA,CACACACACACACACACACACA,CACACACACACACACACACACACA,CACACACACACACACACACACACACA,CACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA [Show Flanks]
Chromosome:: 18:1284044 (GRCh38)
18:1284045 (GRCh37)
Canonical SPDI:: NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA,NC_000018.10:1284028:ACACACACACACACACACACACACACACACACACACACACACA:ACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACA
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACACA=0./0 (ALFA)
-=0.0345/173 (1000Genomes)
HGVS:: NC_000018.10:g.1284030CA[7], NC_000018.10:g.1284030CA[8], NC_000018.10:g.1284030CA[9], NC_000018.10:g.1284030CA[10], NC_000018.10:g.1284030CA[11], NC_000018.10:g.1284030CA[12], NC_000018.10:g.1284030CA[13], NC_000018.10:g.1284030CA[14], NC_000018.10:g.1284030CA[15], NC_000018.10:g.1284030CA[16], NC_000018.10:g.1284030CA[17], NC_000018.10:g.1284030CA[18], NC_000018.10:g.1284030CA[19], NC_000018.10:g.1284030CA[20], NC_000018.10:g.1284030CA[22], NC_000018.10:g.1284030CA[23], NC_000018.10:g.1284030CA[24], NC_000018.10:g.1284030CA[25], NC_000018.10:g.1284030CA[26], NC_000018.10:g.1284030CA[27], NC_000018.10:g.1284030CA[28], NC_000018.10:g.1284030CA[29], NC_000018.10:g.1284030CA[30], NC_000018.10:g.1284030CA[31], NC_000018.10:g.1284030CA[37], NC_000018.10:g.1284030CA[38], NC_000018.9:g.1284031CA[7], NC_000018.9:g.1284031CA[8], NC_000018.9:g.1284031CA[9], NC_000018.9:g.1284031CA[10], NC_000018.9:g.1284031CA[11], NC_000018.9:g.1284031CA[12], NC_000018.9:g.1284031CA[13], NC_000018.9:g.1284031CA[14], NC_000018.9:g.1284031CA[15], NC_000018.9:g.1284031CA[16], NC_000018.9:g.1284031CA[17], NC_000018.9:g.1284031CA[18], NC_000018.9:g.1284031CA[19], NC_000018.9:g.1284031CA[20], NC_000018.9:g.1284031CA[22], NC_000018.9:g.1284031CA[23], NC_000018.9:g.1284031CA[24], NC_000018.9:g.1284031CA[25], NC_000018.9:g.1284031CA[26], NC_000018.9:g.1284031CA[27], NC_000018.9:g.1284031CA[28], NC_000018.9:g.1284031CA[29], NC_000018.9:g.1284031CA[30], NC_000018.9:g.1284031CA[31], NC_000018.9:g.1284031CA[37], NC_000018.9:g.1284031CA[38]

Select item 149110376811.

rs1491103768 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATGTGTGTGTGT,ATGTGTGTGTGTGT [Show Flanks]
Chromosome:: 18:1294143 (GRCh38)
18:1294145 (GRCh37)
Canonical SPDI:: NC_000018.10:1294143:T:TATGTGTGTGTGT,NC_000018.10:1294143:T:TATGTGTGTGTGTGT
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATGTGTGTGTGTGT=0./0 (ALFA)
TATGTGTGTGTGTG=0.000004/1 (TOPMED)
TATGTGTGTGTG=0.000032/3 (GnomAD)
HGVS:: NC_000018.10:g.1294144_1294145insATGTGTGTGTGT, NC_000018.10:g.1294144_1294145insATGTGTGTGTGTGT, NC_000018.9:g.1294145_1294146insATGTGTGTGTGT, NC_000018.9:g.1294145_1294146insATGTGTGTGTGTGT

Select item 149104431712.

rs1491044317 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 18:1288645 (GRCh38)
18:1288646 (GRCh37)
Canonical SPDI:: NC_000018.10:1288644:AAAAAAA:AAAAAA,NC_000018.10:1288644:AAAAAAA:AAAAAAAA
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000018.10:g.1288651del, NC_000018.10:g.1288651dup, NC_000018.9:g.1288652del, NC_000018.9:g.1288652dup

Select item 149102357813.

rs1491023578 has merged into rs34611604 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAA>-,A,AA,AAAA,AAAAA,AAAAAA,AAAAAAA [Show Flanks]
Chromosome:: 18:1328085 (GRCh38)
18:1328086 (GRCh37)
Canonical SPDI:: NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000018.10:1328073:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
A=0.4075/2041 (1000Genomes)
A=0.475/19 (GENOME_DK)
HGVS:: NC_000018.10:g.1328085_1328087del, NC_000018.10:g.1328086_1328087del, NC_000018.10:g.1328087del, NC_000018.10:g.1328087dup, NC_000018.10:g.1328086_1328087dup, NC_000018.10:g.1328085_1328087dup, NC_000018.10:g.1328084_1328087dup, NC_000018.9:g.1328086_1328088del, NC_000018.9:g.1328087_1328088del, NC_000018.9:g.1328088del, NC_000018.9:g.1328088dup, NC_000018.9:g.1328087_1328088dup, NC_000018.9:g.1328086_1328088dup, NC_000018.9:g.1328085_1328088dup

Select item 149101576414.

rs1491015764 has merged into rs141216352 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGTG>-,TG,TGTGTG,TGTGTGTG,TGTGTGTGTG [Show Flanks]
Chromosome:: 18:1274014 (GRCh38)
18:1274015 (GRCh37)
Canonical SPDI:: NC_000018.10:1274000:GTGTGTGTGTGTGTGTG:GTGTGTGTGTGTG,NC_000018.10:1274000:GTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTG,NC_000018.10:1274000:GTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTG,NC_000018.10:1274000:GTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTG,NC_000018.10:1274000:GTGTGTGTGTGTGTGTG:GTGTGTGTGTGTGTGTGTGTGTG
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTGTGTGTGTGTGTGTGTGTG=0./0 (ALFA)
-=0.00855/38 (1000Genomes)
GT=0.02333/14 (NorthernSweden)
GT=0.025/1 (GENOME_DK)
HGVS:: NC_000018.10:g.1274002TG[6], NC_000018.10:g.1274002TG[7], NC_000018.10:g.1274002TG[9], NC_000018.10:g.1274002TG[10], NC_000018.10:g.1274002TG[11], NC_000018.9:g.1274003TG[6], NC_000018.9:g.1274003TG[7], NC_000018.9:g.1274003TG[9], NC_000018.9:g.1274003TG[10], NC_000018.9:g.1274003TG[11]

Select item 149097713515.

rs1490977135 [Homo sapiens]

Variant type:: SNV:
Alleles:: T>A
Chromosome:: no mapping
Canonical SPDI:

Select item 149096233416.

rs1490962334 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:1301638 (GRCh38)
18:1301639 (GRCh37)
Canonical SPDI:: NC_000018.10:1301637:A:G
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.1301638A>G, NC_000018.9:g.1301639A>G

Select item 149094244217.

rs1490942442 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:1302047 (GRCh38)
18:1302048 (GRCh37)
Canonical SPDI:: NC_000018.10:1302046:A:G
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.1302047A>G, NC_000018.9:g.1302048A>G

Select item 149093624918.

rs1490936249 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:1340859 (GRCh38)
18:1340860 (GRCh37)
Canonical SPDI:: NC_000018.10:1340858:A:G
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000018.10:g.1340859A>G, NC_000018.9:g.1340860A>G

Select item 149092580119.

rs1490925801 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 18:1330044 (GRCh38)
18:1330045 (GRCh37)
Canonical SPDI:: NC_000018.10:1330043:A:G
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000018.10:g.1330044A>G, NC_000018.9:g.1330045A>G

Select item 149091060820.

rs1490910608 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 18:1328826 (GRCh38)
18:1328827 (GRCh37)
Canonical SPDI:: NC_000018.10:1328825:G:A
Gene:: LINC00470 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000018.10:g.1328826G>A, NC_000018.9:g.1328827G>A

<< First< Prev

Page of 50

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1000

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity