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1.

rs1491174917 [Homo sapiens]
    Variant type:
    DEL
    Alleles:
    CA>- [Show Flanks]
    Chromosome:
    14:24159032 (GRCh38)
    14:24628241 (GRCh37)
    Canonical SPDI:
    NC_000014.9:24159031:CA:
    Gene:
    RNF31 (Varview)
    Functional Consequence:
    intron_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    -=0.00076/9 (ALFA)
    -=0.0022/55 (TOMMO)
    HGVS:
    2.

    rs1491160080 has merged into rs529900287 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      AAAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
      Chromosome:
      14:24159043 (GRCh38)
      14:24628252 (GRCh37)
      Canonical SPDI:
      NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000014.9:24159032:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
      Gene:
      RNF31 (Varview)
      Functional Consequence:
      intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      AAAAAAAAAAA=0./0 (ALFA)
      -=0.2512/1258 (1000Genomes)
      -=0.3/12 (GENOME_DK)
      HGVS:
      NC_000014.9:g.24159043_24159059del, NC_000014.9:g.24159044_24159059del, NC_000014.9:g.24159045_24159059del, NC_000014.9:g.24159046_24159059del, NC_000014.9:g.24159047_24159059del, NC_000014.9:g.24159048_24159059del, NC_000014.9:g.24159049_24159059del, NC_000014.9:g.24159050_24159059del, NC_000014.9:g.24159051_24159059del, NC_000014.9:g.24159052_24159059del, NC_000014.9:g.24159053_24159059del, NC_000014.9:g.24159054_24159059del, NC_000014.9:g.24159055_24159059del, NC_000014.9:g.24159056_24159059del, NC_000014.9:g.24159057_24159059del, NC_000014.9:g.24159058_24159059del, NC_000014.9:g.24159059del, NC_000014.9:g.24159059dup, NC_000014.9:g.24159058_24159059dup, NC_000014.9:g.24159057_24159059dup, NC_000014.9:g.24159056_24159059dup, NC_000014.9:g.24159055_24159059dup, NC_000014.9:g.24159054_24159059dup, NC_000014.9:g.24159052_24159059dup, NG_042234.1:g.17169_17185del, NG_042234.1:g.17170_17185del, NG_042234.1:g.17171_17185del, NG_042234.1:g.17172_17185del, NG_042234.1:g.17173_17185del, NG_042234.1:g.17174_17185del, NG_042234.1:g.17175_17185del, NG_042234.1:g.17176_17185del, NG_042234.1:g.17177_17185del, NG_042234.1:g.17178_17185del, NG_042234.1:g.17179_17185del, NG_042234.1:g.17180_17185del, NG_042234.1:g.17181_17185del, NG_042234.1:g.17182_17185del, NG_042234.1:g.17183_17185del, NG_042234.1:g.17184_17185del, NG_042234.1:g.17185del, NG_042234.1:g.17185dup, NG_042234.1:g.17184_17185dup, NG_042234.1:g.17183_17185dup, NG_042234.1:g.17182_17185dup, NG_042234.1:g.17181_17185dup, NG_042234.1:g.17180_17185dup, NG_042234.1:g.17178_17185dup, NW_018654722.1:g.460021_460037del, NW_018654722.1:g.460022_460037del, NW_018654722.1:g.460023_460037del, NW_018654722.1:g.460024_460037del, NW_018654722.1:g.460025_460037del, NW_018654722.1:g.460026_460037del, NW_018654722.1:g.460027_460037del, NW_018654722.1:g.460028_460037del, NW_018654722.1:g.460029_460037del, NW_018654722.1:g.460030_460037del, NW_018654722.1:g.460031_460037del, NW_018654722.1:g.460032_460037del, NW_018654722.1:g.460033_460037del, NW_018654722.1:g.460034_460037del, NW_018654722.1:g.460035_460037del, NW_018654722.1:g.460036_460037del, NW_018654722.1:g.460037del, NW_018654722.1:g.460037dup, NW_018654722.1:g.460036_460037dup, NW_018654722.1:g.460035_460037dup, NW_018654722.1:g.460034_460037dup, NW_018654722.1:g.460033_460037dup, NW_018654722.1:g.460032_460037dup, NW_018654722.1:g.460030_460037dup, NC_000014.8:g.24628252_24628268del, NC_000014.8:g.24628253_24628268del, NC_000014.8:g.24628254_24628268del, NC_000014.8:g.24628255_24628268del, NC_000014.8:g.24628256_24628268del, NC_000014.8:g.24628257_24628268del, NC_000014.8:g.24628258_24628268del, NC_000014.8:g.24628259_24628268del, NC_000014.8:g.24628260_24628268del, NC_000014.8:g.24628261_24628268del, NC_000014.8:g.24628262_24628268del, NC_000014.8:g.24628263_24628268del, NC_000014.8:g.24628264_24628268del, NC_000014.8:g.24628265_24628268del, NC_000014.8:g.24628266_24628268del, NC_000014.8:g.24628267_24628268del, NC_000014.8:g.24628268del, NC_000014.8:g.24628268dup, NC_000014.8:g.24628267_24628268dup, NC_000014.8:g.24628266_24628268dup, NC_000014.8:g.24628265_24628268dup, NC_000014.8:g.24628264_24628268dup, NC_000014.8:g.24628263_24628268dup, NC_000014.8:g.24628261_24628268dup
      3.

      rs1491062779 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        AC>- [Show Flanks]
        Chromosome:
        14:24159608 (GRCh38)
        14:24628817 (GRCh37)
        Canonical SPDI:
        NC_000014.9:24159605:ACAC:AC
        Gene:
        IRF9 (Varview), RNF31 (Varview)
        Functional Consequence:
        upstream_transcript_variant,intron_variant,2KB_upstream_variant
        Validated:
        by frequency,by alfa
        MAF:
        ACAC=0./0 (ALFA)
        HGVS:
        4.

        rs1491038470 [Homo sapiens]
          Variant type:
          INS
          Alleles:
          ->AAC,AC [Show Flanks]
          Chromosome:
          14:24159606 (GRCh38)
          14:24628816 (GRCh37)
          Canonical SPDI:
          NC_000014.9:24159606::AAC,NC_000014.9:24159606::AC
          Gene:
          IRF9 (Varview), RNF31 (Varview)
          Functional Consequence:
          upstream_transcript_variant,intron_variant,2KB_upstream_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          AC=0./0 (ALFA)
          HGVS:
          5.

          rs1490849828 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>T [Show Flanks]
            Chromosome:
            14:24145810 (GRCh38)
            14:24615019 (GRCh37)
            Canonical SPDI:
            NC_000014.9:24145809:A:T
            Gene:
            PSME2 (Varview), RNF31 (Varview)
            Functional Consequence:
            upstream_transcript_variant,intron_variant,2KB_upstream_variant,5_prime_UTR_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            T=0./0 (ALFA)
            T=0./0 (GnomAD)
            T=0.000004/1 (GnomAD_exomes)
            T=0.000004/1 (TOPMED)
            HGVS:
            6.

            rs1489981198 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>T [Show Flanks]
              Chromosome:
              14:24160510 (GRCh38)
              14:24629719 (GRCh37)
              Canonical SPDI:
              NC_000014.9:24160509:C:T
              Gene:
              IRF9 (Varview), RNF31 (Varview)
              Functional Consequence:
              upstream_transcript_variant,intron_variant,2KB_upstream_variant
              Validated:
              by frequency,by alfa
              MAF:
              T=0./0 (ALFA)
              HGVS:
              7.

              rs1489897685 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>T [Show Flanks]
                Chromosome:
                14:24158997 (GRCh38)
                14:24628206 (GRCh37)
                Canonical SPDI:
                NC_000014.9:24158996:C:T
                Gene:
                RNF31 (Varview)
                Functional Consequence:
                intron_variant
                Validated:
                by frequency,by alfa
                MAF:
                T=0./0 (ALFA)
                T=0.000004/1 (TOPMED)
                HGVS:
                8.

                rs1489466766 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>T [Show Flanks]
                  Chromosome:
                  14:24149542 (GRCh38)
                  14:24618751 (GRCh37)
                  Canonical SPDI:
                  NC_000014.9:24149541:G:T
                  Gene:
                  RNF31 (Varview)
                  Functional Consequence:
                  coding_sequence_variant,missense_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  T=0./0 (ALFA)
                  T=0.000004/1 (TOPMED)
                  T=0.000007/1 (GnomAD)
                  HGVS:
                  9.

                  rs1489293380 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>G,T [Show Flanks]
                    Chromosome:
                    14:24152714 (GRCh38)
                    14:24621923 (GRCh37)
                    Canonical SPDI:
                    NC_000014.9:24152713:C:G,NC_000014.9:24152713:C:T
                    Gene:
                    RNF31 (Varview)
                    Functional Consequence:
                    intron_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    T=0.000224/1 (ALFA)
                    T=0.000007/1 (GnomAD)
                    G=0.000071/1 (TOMMO)
                    T=0.000223/1 (Estonian)
                    HGVS:
                    10.

                    rs1489229715 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      14:24145873 (GRCh38)
                      14:24615082 (GRCh37)
                      Canonical SPDI:
                      NC_000014.9:24145872:C:T
                      Gene:
                      PSME2 (Varview), RNF31 (Varview)
                      Functional Consequence:
                      upstream_transcript_variant,intron_variant,2KB_upstream_variant,5_prime_UTR_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      T=0./0 (ALFA)
                      T=0.000007/1 (GnomAD)
                      T=0.000019/5 (TOPMED)
                      HGVS:
                      11.

                      rs1489131710 [Homo sapiens]
                        Variant type:
                        DEL
                        Alleles:
                        CAAAAAAAAA>- [Show Flanks]
                        Chromosome:
                        14:24159584 (GRCh38)
                        14:24628793 (GRCh37)
                        Canonical SPDI:
                        NC_000014.9:24159583:CAAAAAAAAA:
                        Gene:
                        IRF9 (Varview), RNF31 (Varview)
                        Functional Consequence:
                        upstream_transcript_variant,intron_variant,2KB_upstream_variant
                        Validated:
                        by frequency,by alfa
                        MAF:
                        -=0./0 (ALFA)
                        HGVS:
                        12.

                        rs1488879927 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          G>A,C [Show Flanks]
                          Chromosome:
                          14:24161084 (GRCh38)
                          14:24630293 (GRCh37)
                          Canonical SPDI:
                          NC_000014.9:24161083:G:A,NC_000014.9:24161083:G:C
                          Gene:
                          IRF9 (Varview), RNF31 (Varview)
                          Functional Consequence:
                          upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          C=0./0 (ALFA)
                          A=0.000004/1 (TOPMED)
                          C=0.000007/1 (GnomAD)
                          HGVS:
                          13.

                          rs1488860738 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            T>G [Show Flanks]
                            Chromosome:
                            14:24154008 (GRCh38)
                            14:24623217 (GRCh37)
                            Canonical SPDI:
                            NC_000014.9:24154007:T:G
                            Gene:
                            RNF31 (Varview)
                            Functional Consequence:
                            intron_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            G=0./0 (ALFA)
                            G=0.000004/1 (TOPMED)
                            G=0.000007/1 (GnomAD)
                            HGVS:
                            14.

                            rs1488685226 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>G [Show Flanks]
                              Chromosome:
                              14:24157818 (GRCh38)
                              14:24627027 (GRCh37)
                              Canonical SPDI:
                              NC_000014.9:24157817:C:G
                              Gene:
                              RNF31 (Varview)
                              Functional Consequence:
                              intron_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000008/2 (TOPMED)
                              HGVS:
                              15.

                              rs1488653530 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                C>A,T [Show Flanks]
                                Chromosome:
                                14:24156765 (GRCh38)
                                14:24625974 (GRCh37)
                                Canonical SPDI:
                                NC_000014.9:24156764:C:A,NC_000014.9:24156764:C:T
                                Gene:
                                RNF31 (Varview)
                                Functional Consequence:
                                intron_variant
                                Validated:
                                by frequency,by alfa
                                MAF:
                                T=0./0 (ALFA)
                                T=0.000007/1 (GnomAD)
                                HGVS:
                                16.

                                rs1488149787 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  C>T [Show Flanks]
                                  Chromosome:
                                  14:24160716 (GRCh38)
                                  14:24629925 (GRCh37)
                                  Canonical SPDI:
                                  NC_000014.9:24160715:C:T
                                  Gene:
                                  IRF9 (Varview), RNF31 (Varview)
                                  Functional Consequence:
                                  upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
                                  Validated:
                                  by frequency,by alfa,by cluster
                                  MAF:
                                  T=0./0 (ALFA)
                                  T=0.000015/4 (TOPMED)
                                  T=0.000021/3 (GnomAD)
                                  HGVS:
                                  17.

                                  rs1487307341 [Homo sapiens]
                                    Variant type:
                                    SNV
                                    Alleles:
                                    G>A [Show Flanks]
                                    Chromosome:
                                    14:24147680 (GRCh38)
                                    14:24616889 (GRCh37)
                                    Canonical SPDI:
                                    NC_000014.9:24147679:G:A
                                    Gene:
                                    PSME2 (Varview), RNF31 (Varview)
                                    Functional Consequence:
                                    upstream_transcript_variant,intron_variant,2KB_upstream_variant,5_prime_UTR_variant
                                    HGVS:
                                    18.

                                    rs1487116951 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      G>T [Show Flanks]
                                      Chromosome:
                                      14:24151257 (GRCh38)
                                      14:24620466 (GRCh37)
                                      Canonical SPDI:
                                      NC_000014.9:24151256:G:T
                                      Gene:
                                      RNF31 (Varview)
                                      Functional Consequence:
                                      coding_sequence_variant,missense_variant
                                      Validated:
                                      by frequency,by cluster
                                      MAF:
                                      T=0.000004/1 (GnomAD_exomes)
                                      T=0.000177/3 (TOMMO)
                                      HGVS:
                                      19.

                                      rs1486895333 [Homo sapiens]
                                        Variant type:
                                        DELINS
                                        Alleles:
                                        A>-,AA [Show Flanks]
                                        Chromosome:
                                        14:24153281 (GRCh38)
                                        14:24622490 (GRCh37)
                                        Canonical SPDI:
                                        NC_000014.9:24153280:AAAAAAA:AAAAAA,NC_000014.9:24153280:AAAAAAA:AAAAAAAA
                                        Gene:
                                        RNF31 (Varview)
                                        Functional Consequence:
                                        intron_variant
                                        Validated:
                                        by frequency,by alfa,by cluster
                                        MAF:
                                        AAAAAAAA=0./0 (ALFA)
                                        HGVS:
                                        20.

                                        rs1486878351 [Homo sapiens]
                                          Variant type:
                                          SNV
                                          Alleles:
                                          C>T [Show Flanks]
                                          Chromosome:
                                          14:24150771 (GRCh38)
                                          14:24619980 (GRCh37)
                                          Canonical SPDI:
                                          NC_000014.9:24150770:C:T
                                          Gene:
                                          RNF31 (Varview)
                                          Functional Consequence:
                                          coding_sequence_variant,synonymous_variant
                                          Validated:
                                          by frequency,by alfa,by cluster
                                          MAF:
                                          T=0.000085/3 (ALFA)
                                          T=0.000004/1 (GnomAD_exomes)
                                          T=0.000007/1 (GnomAD)
                                          T=0.000011/3 (TOPMED)
                                          HGVS:

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