SNP Links for Gene (Select 53336) - SNP

Links from Gene

Items: 1 to 20 of 2010

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Select item 14911510841.

rs1491151084 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: X:88745466 (GRCh38)
X:88000467 (GRCh37)
Canonical SPDI:: NC_000023.11:88745465:CA:
Gene:: CPXCR1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000023.11:g.88745466_88745467del, NC_000023.10:g.88000467_88000468del, NG_021312.2:g.3243_3244del, NG_021312.1:g.3242_3243del

Select item 14910978152.

rs1491097815 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CAAAA [Show Flanks]
Chromosome:: X:88745466 (GRCh38)
X:88000468 (GRCh37)
Canonical SPDI:: NC_000023.11:88745466:AA:AACAAAA
Gene:: CPXCR1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AACAAAA=0./0 (ALFA)
AACAA=0.00002/1 (GnomAD)
HGVS:: NC_000023.11:g.88745468_88745469insCAAAA, NC_000023.10:g.88000469_88000470insCAAAA, NG_021312.2:g.3245_3246insCAAAA, NG_021312.1:g.3244_3245insCAAAA

Select item 14906441243.

rs1490644124 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:88746834 (GRCh38)
X:88001835 (GRCh37)
Canonical SPDI:: NC_000023.11:88746833:G:C
Gene:: CPXCR1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/2 (GnomAD)
C=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.88746834G>C, NC_000023.10:g.88001835G>C, NG_021312.2:g.4611G>C, NG_021312.1:g.4610G>C

Select item 14902992884.

rs1490299288 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:88746126 (GRCh38)
X:88001127 (GRCh37)
Canonical SPDI:: NC_000023.11:88746125:C:T
Gene:: CPXCR1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.88746126C>T, NC_000023.10:g.88001127C>T, NG_021312.2:g.3903C>T, NG_021312.1:g.3902C>T

Select item 14900867295.

rs1490086729 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:88754725 (GRCh38)
X:88009726 (GRCh37)
Canonical SPDI:: NC_000023.11:88754724:A:G
Gene:: CPXCR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000019/2 (GnomAD)
G=0.00018/2 (TOMMO)
HGVS:: NC_000023.11:g.88754725A>G, NC_000023.10:g.88009726A>G, NG_021312.2:g.12502A>G, NG_021312.1:g.12501A>G, NM_033048.6:c.*405A>G, NM_033048.5:c.*405A>G, NM_001184771.2:c.*405A>G, NM_001184771.1:c.*405A>G

Select item 14900542866.

rs1490054286 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:88745640 (GRCh38)
X:88000641 (GRCh37)
Canonical SPDI:: NC_000023.11:88745639:C:T
Gene:: CPXCR1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.88745640C>T, NC_000023.10:g.88000641C>T, NG_021312.2:g.3417C>T, NG_021312.1:g.3416C>T

Select item 14899437017.

rs1489943701 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: X:88749245 (GRCh38)
X:88004246 (GRCh37)
Canonical SPDI:: NC_000023.11:88749244:C:A
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
HGVS:: NC_000023.11:g.88749245C>A, NC_000023.10:g.88004246C>A, NG_021312.2:g.7022C>A, NG_021312.1:g.7021C>A

Select item 14894696648.

rs1489469664 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:88749127 (GRCh38)
X:88004128 (GRCh37)
Canonical SPDI:: NC_000023.11:88749126:A:T
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.88749127A>T, NC_000023.10:g.88004128A>T, NG_021312.2:g.6904A>T, NG_021312.1:g.6903A>T

Select item 14888944599.

rs1488894459 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:88749402 (GRCh38)
X:88004403 (GRCh37)
Canonical SPDI:: NC_000023.11:88749401:A:T
Gene:: CPXCR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.88749402A>T, NC_000023.10:g.88004403A>T, NG_021312.2:g.7179A>T, NG_021312.1:g.7178A>T, NM_033048.6:c.-30A>T, NM_033048.5:c.-30A>T, NM_001184771.2:c.-30A>T, NM_001184771.1:c.-30A>T

Select item 148877571910.

rs1488775719 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: X:88753049 (GRCh38)
X:88008050 (GRCh37)
Canonical SPDI:: NC_000023.11:88753048:T:A,NC_000023.11:88753048:T:C
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000023.11:g.88753049T>A, NC_000023.11:g.88753049T>C, NC_000023.10:g.88008050T>A, NC_000023.10:g.88008050T>C, NG_021312.2:g.10826T>A, NG_021312.2:g.10826T>C, NG_021312.1:g.10825T>A, NG_021312.1:g.10825T>C

Select item 148866341711.

rs1488663417 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:88754678 (GRCh38)
X:88009679 (GRCh37)
Canonical SPDI:: NC_000023.11:88754677:T:C
Gene:: CPXCR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.88754678T>C, NC_000023.10:g.88009679T>C, NG_021312.2:g.12455T>C, NG_021312.1:g.12454T>C, NM_033048.6:c.*358T>C, NM_033048.5:c.*358T>C, NM_001184771.2:c.*358T>C, NM_001184771.1:c.*358T>C

Select item 148859931312.

rs1488599313 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:88748664 (GRCh38)
X:88003665 (GRCh37)
Canonical SPDI:: NC_000023.11:88748663:T:C
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.88748664T>C, NC_000023.10:g.88003665T>C, NG_021312.2:g.6441T>C, NG_021312.1:g.6440T>C

Select item 148848611613.

rs1488486116 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:88749860 (GRCh38)
X:88004861 (GRCh37)
Canonical SPDI:: NC_000023.11:88749859:A:G
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.88749860A>G, NC_000023.10:g.88004861A>G, NG_021312.2:g.7637A>G, NG_021312.1:g.7636A>G

Select item 148804620614.

rs1488046206 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:88750989 (GRCh38)
X:88005990 (GRCh37)
Canonical SPDI:: NC_000023.11:88750988:G:A
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000023.11:g.88750989G>A, NC_000023.10:g.88005990G>A, NG_021312.2:g.8766G>A, NG_021312.1:g.8765G>A

Select item 148799658415.

rs1487996584 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:88747476 (GRCh38)
X:88002477 (GRCh37)
Canonical SPDI:: NC_000023.11:88747475:T:A
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.88747476T>A, NC_000023.10:g.88002477T>A, NG_021312.2:g.5253T>A, NG_021312.1:g.5252T>A

Select item 148794622616.

rs1487946226 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:88747296 (GRCh38)
X:88002297 (GRCh37)
Canonical SPDI:: NC_000023.11:88747295:C:G
Gene:: CPXCR1 (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000023/6 (TOPMED)
G=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.88747296C>G, NC_000023.10:g.88002297C>G, NG_021312.2:g.5073C>G, NG_021312.1:g.5072C>G, NM_033048.6:c.-188C>G, NM_033048.5:c.-188C>G, NM_001184771.2:c.-150C>G, NM_001184771.1:c.-150C>G

Select item 148783311317.

rs1487833113 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:88748769 (GRCh38)
X:88003770 (GRCh37)
Canonical SPDI:: NC_000023.11:88748768:T:C
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000029/3 (GnomAD)
C=0.000042/11 (TOPMED)
HGVS:: NC_000023.11:g.88748769T>C, NC_000023.10:g.88003770T>C, NG_021312.2:g.6546T>C, NG_021312.1:g.6545T>C

Select item 148656639318.

rs1486566393 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:88752248 (GRCh38)
X:88007249 (GRCh37)
Canonical SPDI:: NC_000023.11:88752247:A:G
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000023.11:g.88752248A>G, NC_000023.10:g.88007249A>G, NG_021312.2:g.10025A>G, NG_021312.1:g.10024A>G

Select item 148651472719.

rs1486514727 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:88750898 (GRCh38)
X:88005899 (GRCh37)
Canonical SPDI:: NC_000023.11:88750897:T:G
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.88750898T>G, NC_000023.10:g.88005899T>G, NG_021312.2:g.8675T>G, NG_021312.1:g.8674T>G

Select item 148644824020.

rs1486448240 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: X:88750405 (GRCh38)
X:88005406 (GRCh37)
Canonical SPDI:: NC_000023.11:88750404:G:T
Gene:: CPXCR1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.88750405G>T, NC_000023.10:g.88005406G>T, NG_021312.2:g.8182G>T, NG_021312.1:g.8181G>T

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