Links from Gene
Items: 1 to 20 of 13494
1.
rs1491589122 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CG,G
[Show Flanks]
- Chromosome:
- 7:37848220
(GRCh38)
7:37887823
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37848220:G:GCG,NC_000007.14:37848220:G:GG
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GG=0./0
(
ALFA)
G=0.02273/3
(NorthernSweden)
- HGVS:
2.
rs1491585036 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 7:37848227
(GRCh38)
7:37887829
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37848225:AGA:A
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.02023/240
(
ALFA)
-=0.09704/374
(ALSPAC)
-=0.10194/378
(TWINSUK)
-=0.12284/783
(TOMMO)
-=0.24228/361
(GnomAD)
- HGVS:
3.
rs1491581737 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 7:37849869
(GRCh38)
7:37889471
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37849868:CA:
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.377761/4481
(
ALFA)
CA=0.383587/38684
(GnomAD)
-=0.398999/6386
(TOMMO)
- HGVS:
4.
rs1491570036 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->G
[Show Flanks]
- Chromosome:
- 7:37848214
(GRCh38)
7:37887817
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37848214:G:GG
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by cluster
- MAF:
G=0.0039/4
(GnomAD)
G=0.0273/3
(NorthernSweden)
- HGVS:
5.
rs1491569968 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->AA,AAA,AAAA,AAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA,AAGGAA,AAGGAAGAA,AAGGAAGAAGAA,AC
[Show Flanks]
- Chromosome:
- 7:37848065
(GRCh38)
7:37887668
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37848065::AA,NC_000007.14:37848065::AAA,NC_000007.14:37848065::AAAA,NC_000007.14:37848065::AAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA,NC_000007.14:37848065::AAGGAA,NC_000007.14:37848065::AAGGAAGAA,NC_000007.14:37848065::AAGGAAGAAGAA,NC_000007.14:37848065::AC
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAA=0./0
(
ALFA)
AAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA=0.0001/1
(TOMMO)
- HGVS:
NC_000007.14:g.37848065_37848066insAA, NC_000007.14:g.37848065_37848066insAAA, NC_000007.14:g.37848065_37848066insAAAA, NC_000007.14:g.37848065_37848066insAAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA, NC_000007.14:g.37848065_37848066insAAGGAA, NC_000007.14:g.37848065_37848066insAAGGAAGAA, NC_000007.14:g.37848065_37848066insAAGGAAGAAGAA, NC_000007.14:g.37848065_37848066insAC, NC_000007.13:g.37887667_37887668insAA, NC_000007.13:g.37887667_37887668insAAA, NC_000007.13:g.37887667_37887668insAAAA, NC_000007.13:g.37887667_37887668insAAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA, NC_000007.13:g.37887667_37887668insAAGGAA, NC_000007.13:g.37887667_37887668insAAGGAAGAA, NC_000007.13:g.37887667_37887668insAAGGAAGAAGAA, NC_000007.13:g.37887667_37887668insAC, NG_015893.1:g.4469_4470insAA, NG_015893.1:g.4469_4470insAAA, NG_015893.1:g.4469_4470insAAAA, NG_015893.1:g.4469_4470insAAAAGAAGAGGAAAAGAAGAAGAAAAGAAGAAGAAAA, NG_015893.1:g.4469_4470insAAGGAA, NG_015893.1:g.4469_4470insAAGGAAGAA, NG_015893.1:g.4469_4470insAAGGAAGAAGAA, NG_015893.1:g.4469_4470insAC
6.
rs1491562349 has merged into rs1411412701 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-,GAGA,GAGAGAGAGA
[Show Flanks]
- Chromosome:
- 7:37882575
(GRCh38)
7:37922177
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37882573:AGA:A,NC_000007.14:37882573:AGA:AGAGA,NC_000007.14:37882573:AGA:AGAGAGAGAGA
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGA=0./0
(
ALFA)
AG=0.000004/1
(TOPMED)
-=0.000053/2
(GnomAD)
- HGVS:
10.
rs1491535827 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 7:37848363
(GRCh38)
7:37887965
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37848361:ACA:A
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.00034/4
(
ALFA)
-=0.00048/13
(TOMMO)
- HGVS:
12.
rs1491528614 has merged into rs35685455 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ATAT>-,AT,ATATAT,ATATATAT,ATATATATAT
[Show Flanks]
- Chromosome:
- 7:37879138
(GRCh38)
7:37918740
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37879126:TATATATATATATAT:TATATATATAT,NC_000007.14:37879126:TATATATATATATAT:TATATATATATAT,NC_000007.14:37879126:TATATATATATATAT:TATATATATATATATAT,NC_000007.14:37879126:TATATATATATATAT:TATATATATATATATATAT,NC_000007.14:37879126:TATATATATATATAT:TATATATATATATATATATAT
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATATATATATATAT=0./0
(
ALFA)
TA=0.05/2
(GENOME_DK)
TA=0.095/57
(NorthernSweden)
TA=0.32407/70
(Vietnamese)
- HGVS:
NC_000007.14:g.37879128AT[5], NC_000007.14:g.37879128AT[6], NC_000007.14:g.37879128AT[8], NC_000007.14:g.37879128AT[9], NC_000007.14:g.37879128AT[10], NC_000007.13:g.37918730AT[5], NC_000007.13:g.37918730AT[6], NC_000007.13:g.37918730AT[8], NC_000007.13:g.37918730AT[9], NC_000007.13:g.37918730AT[10], NG_015893.1:g.35532AT[5], NG_015893.1:g.35532AT[6], NG_015893.1:g.35532AT[8], NG_015893.1:g.35532AT[9], NG_015893.1:g.35532AT[10]
13.
rs1491487803 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 7:37878647
(GRCh38)
7:37918249
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37878645:ACA:A
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
14.
rs1491486586 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 7:37875419
(GRCh38)
7:37915022
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37875419::A
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency
- MAF:
A=0.000029/4
(GnomAD)
- HGVS:
15.
rs1491475206 has merged into rs35884288 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,AAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 7:37870597
(GRCh38)
7:37910199
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000007.14:37870588:AAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000007.14:g.37870597_37870608del, NC_000007.14:g.37870600_37870608del, NC_000007.14:g.37870603_37870608del, NC_000007.14:g.37870604_37870608del, NC_000007.14:g.37870605_37870608del, NC_000007.14:g.37870606_37870608del, NC_000007.14:g.37870607_37870608del, NC_000007.14:g.37870608del, NC_000007.14:g.37870608dup, NC_000007.14:g.37870607_37870608dup, NC_000007.14:g.37870605_37870608dup, NC_000007.14:g.37870604_37870608dup, NC_000007.13:g.37910199_37910210del, NC_000007.13:g.37910202_37910210del, NC_000007.13:g.37910205_37910210del, NC_000007.13:g.37910206_37910210del, NC_000007.13:g.37910207_37910210del, NC_000007.13:g.37910208_37910210del, NC_000007.13:g.37910209_37910210del, NC_000007.13:g.37910210del, NC_000007.13:g.37910210dup, NC_000007.13:g.37910209_37910210dup, NC_000007.13:g.37910207_37910210dup, NC_000007.13:g.37910206_37910210dup, NG_015893.1:g.27001_27012del, NG_015893.1:g.27004_27012del, NG_015893.1:g.27007_27012del, NG_015893.1:g.27008_27012del, NG_015893.1:g.27009_27012del, NG_015893.1:g.27010_27012del, NG_015893.1:g.27011_27012del, NG_015893.1:g.27012del, NG_015893.1:g.27012dup, NG_015893.1:g.27011_27012dup, NG_015893.1:g.27009_27012dup, NG_015893.1:g.27008_27012dup
16.
rs1491441736 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AG>-
[Show Flanks]
- Chromosome:
- 7:37847383
(GRCh38)
7:37886985
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37847380:AGAG:AG
- Gene:
- NME8 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
AGAG=0./0
(
ALFA)
-=0.00016/1
(1000Genomes)
- HGVS:
18.
rs1491423922 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->AAAG
[Show Flanks]
- Chromosome:
- 7:37873374
(GRCh38)
7:37912977
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37873374::AAAG
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
AAAG=0./0
(
ALFA)
AAAG=0.000008/1
(GnomAD)
- HGVS:
20.
rs1491405136 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CC>-,CCCC
[Show Flanks]
- Chromosome:
- 7:37875420
(GRCh38)
7:37915022
(GRCh37)
- Canonical SPDI:
- NC_000007.14:37875418:CCC:C,NC_000007.14:37875418:CCC:CCCCC
- Gene:
- NME8 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
-=0.00016/1
(1000Genomes)
-=0.00055/1
(Korea1K)
- HGVS: