Links from Gene
Items: 1 to 20 of 66363
3.
rs1491564634 has merged into rs59139146 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CCACCA>-,CCA,CCACCACCA,CCACCACCACCA
[Show Flanks]
- Chromosome:
- 1:177165807
(GRCh38)
1:177134943
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177165792:CACCACCACCACCACCACCA:CACCACCACCACCA,NC_000001.11:177165792:CACCACCACCACCACCACCA:CACCACCACCACCACCA,NC_000001.11:177165792:CACCACCACCACCACCACCA:CACCACCACCACCACCACCACCA,NC_000001.11:177165792:CACCACCACCACCACCACCA:CACCACCACCACCACCACCACCACCA
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACCACCACCACCACCACCACCA=0./0
(
ALFA)
-=0.03/18
(NorthernSweden)
-=0.03103/139
(Estonian)
-=0.04153/154
(TWINSUK)
-=0.04411/170
(ALSPAC)
-=0.0481/48
(GoNL)
-=0.05/2
(GENOME_DK)
-=0.18056/39
(Vietnamese)
-=0.18941/347
(Korea1K)
-=0.20253/1014
(1000Genomes)
-=0.21556/3613
(TOMMO)
- HGVS:
5.
rs1491548205 has merged into rs1491188993 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TA>-,TATA
[Show Flanks]
- Chromosome:
- 1:177149302
(GRCh38)
1:177118438
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177149293:TATATATATA:TATATATA,NC_000001.11:177149293:TATATATATA:TATATATATATA
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TATATATATATA=0./0
(
ALFA)
-=0.00009/1
(TOMMO)
-=0.00069/1
(Korea1K)
- HGVS:
6.
rs1491545634 has merged into rs35968661 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTT>-,T,TT,TTT,TTTT,TTTTTT,TTTTTTT
[Show Flanks]
- Chromosome:
- 1:176944090
(GRCh38)
1:176913226
(GRCh37)
- Canonical SPDI:
- NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:176944079:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
-=0.4319/2163
(1000Genomes)
- HGVS:
NC_000001.11:g.176944090_176944094del, NC_000001.11:g.176944091_176944094del, NC_000001.11:g.176944092_176944094del, NC_000001.11:g.176944093_176944094del, NC_000001.11:g.176944094del, NC_000001.11:g.176944094dup, NC_000001.11:g.176944093_176944094dup, NC_000001.10:g.176913226_176913230del, NC_000001.10:g.176913227_176913230del, NC_000001.10:g.176913228_176913230del, NC_000001.10:g.176913229_176913230del, NC_000001.10:g.176913230del, NC_000001.10:g.176913230dup, NC_000001.10:g.176913229_176913230dup
7.
rs1491501415 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 1:177011693
(GRCh38)
1:176980829
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177011691:ATA:A
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
-=0.000007/1
(GnomAD)
-=0.000008/2
(TOPMED)
-=0.000156/1
(1000Genomes)
- HGVS:
8.
rs1491473605 has merged into rs201792392 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GG>-,G,GGG
[Show Flanks]
- Chromosome:
- 1:177142909
(GRCh38)
1:177112045
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177142903:GGGGGGG:GGGGG,NC_000001.11:177142903:GGGGGGG:GGGGGG,NC_000001.11:177142903:GGGGGGG:GGGGGGGG
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GGGGGGGG=0.00031/5
(
ALFA)
-=0.04002/73
(Korea1K)
-=0.04034/661
(TOMMO)
- HGVS:
9.
rs1491470416 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CTTT,CTTTTCTTT
[Show Flanks]
- Chromosome:
- 1:177075646
(GRCh38)
1:177044783
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177075646:TTT:TTTCTTT,NC_000001.11:177075646:TTT:TTTCTTTTCTTT
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTCTTTTCTTT=0./0
(
ALFA)
TTTCTTTTC=0.000004/1
(TOPMED)
TTTCTTTTC=0.000038/1
(GnomAD)
TTTC=0.006274/103
(TOMMO)
- HGVS:
12.
rs1491449826 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TGCG,TGTGCG,TGTGTGCG,TGTGTGTGCG,TGTGTGTGTGCG
[Show Flanks]
- Chromosome:
- 1:177033156
(GRCh38)
1:177002293
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177033156:G:GTGCG,NC_000001.11:177033156:G:GTGTGCG,NC_000001.11:177033156:G:GTGTGTGCG,NC_000001.11:177033156:G:GTGTGTGTGCG,NC_000001.11:177033156:G:GTGTGTGTGTGCG
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
13.
rs1491413048 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->A
[Show Flanks]
- Chromosome:
- 1:177090032
(GRCh38)
1:177059169
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177090032::A
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000447/2
(
ALFA)
A=0.000537/75
(GnomAD)
A=0.000625/4
(1000Genomes)
- HGVS:
14.
rs1491402316 has merged into rs386368806 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA
[Show Flanks]
- Chromosome:
- 1:176988332
(GRCh38)
1:176957468
(GRCh37)
- Canonical SPDI:
- NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000001.11:176988317:AAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAA=0./0
(
ALFA)
AAAAA=0.000004/1
(TOPMED)
- HGVS:
NC_000001.11:g.176988332_176988333del, NC_000001.11:g.176988333del, NC_000001.11:g.176988333dup, NC_000001.11:g.176988332_176988333dup, NC_000001.11:g.176988331_176988333dup, NC_000001.11:g.176988330_176988333dup, NC_000001.11:g.176988329_176988333dup, NC_000001.11:g.176988328_176988333dup, NC_000001.11:g.176988327_176988333dup, NC_000001.10:g.176957468_176957469del, NC_000001.10:g.176957469del, NC_000001.10:g.176957469dup, NC_000001.10:g.176957468_176957469dup, NC_000001.10:g.176957467_176957469dup, NC_000001.10:g.176957466_176957469dup, NC_000001.10:g.176957465_176957469dup, NC_000001.10:g.176957464_176957469dup, NC_000001.10:g.176957463_176957469dup
15.
rs1491389131 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T
[Show Flanks]
- Chromosome:
- 1:177011692
(GRCh38)
1:176980829
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177011692:T:TT
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TT=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
T=0.000019/5
(TOPMED)
- HGVS:
16.
rs1491388580 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 1:177149293
(GRCh38)
1:177118429
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177149292:GT:
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0.00506/60
(
ALFA)
-=0.00052/43
(GnomAD)
- HGVS:
17.
rs1491383776 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->ATATATATAGT
[Show Flanks]
- Chromosome:
- 1:177149135
(GRCh38)
1:177118272
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177149135:ATATATATAGT:ATATATATAGTATATATATAGT
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
ATATATATAGTATATATATAGT=0./0
(
ALFA)
ATATATATAGT=0.00002/2
(GnomAD)
- HGVS:
18.
rs1491370721 has merged into rs1466743755 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-,GAGA
[Show Flanks]
- Chromosome:
- 1:176985897
(GRCh38)
1:176955033
(GRCh37)
- Canonical SPDI:
- NC_000001.11:176985895:AGA:A,NC_000001.11:176985895:AGA:AGAGA
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGA=0./0
(
ALFA)
AG=0.00011/2
(TOMMO)
- HGVS:
20.
rs1491363400 has merged into rs1297817646 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AGAGAG>-,AG,AGAG,AGAGAGAG
[Show Flanks]
- Chromosome:
- 1:177008470
(GRCh38)
1:176977606
(GRCh37)
- Canonical SPDI:
- NC_000001.11:177008461:AGAGAGAGAGAGAG:AGAGAGAG,NC_000001.11:177008461:AGAGAGAGAGAGAG:AGAGAGAGAG,NC_000001.11:177008461:AGAGAGAGAGAGAG:AGAGAGAGAGAG,NC_000001.11:177008461:AGAGAGAGAGAGAG:AGAGAGAGAGAGAGAG
- Gene:
- ASTN1 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AGAGAGAGAG=0./0
(
ALFA)
-=0.00078/5
(1000Genomes)
- HGVS: