SNP Links for Gene (Select 442917) - SNP

Links from Gene

Items: 1 to 20 of 1035

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Select item 14885774301.

rs1488577430 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:53788426 (GRCh38)
19:54291680 (GRCh37)
Canonical SPDI:: NC_000019.10:53788425:A:T
Gene:: MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.53788426A>T, NC_000019.9:g.54291680A>T

Select item 14880576642.

rs1488057664 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:53787562 (GRCh38)
19:54290816 (GRCh37)
Canonical SPDI:: NC_000019.10:53787561:G:A
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000049/13 (TOPMED)
HGVS:: NC_000019.10:g.53787562G>A, NC_000019.9:g.54290816G>A, XR_007067336.1:n.537C>T

Select item 14875113633.

rs1487511363 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:53787678 (GRCh38)
19:54290932 (GRCh37)
Canonical SPDI:: NC_000019.10:53787677:G:A,NC_000019.10:53787677:G:T
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000043/6 (GnomAD)
HGVS:: NC_000019.10:g.53787678G>A, NC_000019.10:g.53787678G>T, NC_000019.9:g.54290932G>A, NC_000019.9:g.54290932G>T, XR_007067336.1:n.421C>T, XR_007067336.1:n.421C>A, NR_029864.1:n.4G>A, NR_029864.1:n.4G>T, NR_039909.1:n.65C>T, NR_039909.1:n.65C>A

Select item 14865842154.

rs1486584215 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:53788057 (GRCh38)
19:54291311 (GRCh37)
Canonical SPDI:: NC_000019.10:53788056:G:T
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.53788057G>T, NC_000019.9:g.54291311G>T, XR_007067336.1:n.169C>A

Select item 14863911325.

rs1486391132 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:53787478 (GRCh38)
19:54290732 (GRCh37)
Canonical SPDI:: NC_000019.10:53787477:A:G
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.53787478A>G, NC_000019.9:g.54290732A>G, XR_007067336.1:n.621T>C

Select item 14860266556.

rs1486026655 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 19:53786797 (GRCh38)
19:54290051 (GRCh37)
Canonical SPDI:: NC_000019.10:53786796:AG:
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.53786797_53786798del, NC_000019.9:g.54290051_54290052del

Select item 14853201557.

rs1485320155 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 19:53788367 (GRCh38)
19:54291621 (GRCh37)
Canonical SPDI:: NC_000019.10:53788366:G:A,NC_000019.10:53788366:G:C,NC_000019.10:53788366:G:T
Gene:: MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000019.10:g.53788367G>A, NC_000019.10:g.53788367G>C, NC_000019.10:g.53788367G>T, NC_000019.9:g.54291621G>A, NC_000019.9:g.54291621G>C, NC_000019.9:g.54291621G>T

Select item 14852894608.

rs1485289460 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 19:53788420 (GRCh38)
19:54291674 (GRCh37)
Canonical SPDI:: NC_000019.10:53788419:G:
Gene:: MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.53788420del, NC_000019.9:g.54291674del

Select item 14852241859.

rs1485224185 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:53786518 (GRCh38)
19:54289772 (GRCh37)
Canonical SPDI:: NC_000019.10:53786517:A:G
Gene:: MIR371A (Varview), MIR372 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.53786518A>G, NC_000019.9:g.54289772A>G

Select item 148518697510.

rs1485186975 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 19:53787214 (GRCh38)
19:54290468 (GRCh37)
Canonical SPDI:: NC_000019.10:53787213:T:C
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00565/67 (ALFA)
C=0.00453/74 (TOMMO)
C=0.00479/14 (KOREAN)
C=0.0094/738 (GnomAD)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000019.10:g.53787214T>C, NC_000019.9:g.54290468T>C, XR_007067336.1:n.885A>G

Select item 148409779011.

rs1484097790 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 19:53786891 (GRCh38)
19:54290145 (GRCh37)
Canonical SPDI:: NC_000019.10:53786887:GAGAG:GAG
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAG=0./0 (ALFA)
-=0.000008/2 (TOPMED)
-=0.000015/2 (GnomAD)
HGVS:: NC_000019.10:g.53786889AG[1], NC_000019.9:g.54290143AG[1]

Select item 148405717212.

rs1484057172 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATTTTT>- [Show Flanks]
Chromosome:: 19:53786079 (GRCh38)
19:54289333 (GRCh37)
Canonical SPDI:: NC_000019.10:53786076:TTATTTTT:TT
Gene:: MIR371A (Varview), MIR372 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.53786079_53786084del, NC_000019.9:g.54289333_54289338del

Select item 148322391213.

rs1483223912 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->ATTA
Chromosome:: no mapping
Canonical SPDI:

Select item 148180621214.

rs1481806212 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:53787070 (GRCh38)
19:54290324 (GRCh37)
Canonical SPDI:: NC_000019.10:53787069:T:A
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), LOC124904767 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.53787070T>A, NC_000019.9:g.54290324T>A, XR_007067336.1:n.1029A>T

Select item 148113123715.

rs1481131237 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:53787932 (GRCh38)
19:54291186 (GRCh37)
Canonical SPDI:: NC_000019.10:53787931:A:G
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.53787932A>G, NC_000019.9:g.54291186A>G, XR_007067336.1:n.294T>C, NR_029865.1:n.43A>G

Select item 148079499016.

rs1480794990 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:53787686 (GRCh38)
19:54290940 (GRCh37)
Canonical SPDI:: NC_000019.10:53787685:A:C
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.53787686A>C, NC_000019.9:g.54290940A>C, XR_007067336.1:n.413T>G, NR_029864.1:n.12A>C, NR_039909.1:n.57T>G

Select item 148060356917.

rs1480603569 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:53786942 (GRCh38)
19:54290196 (GRCh37)
Canonical SPDI:: NC_000019.10:53786941:C:T
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.53786942C>T, NC_000019.9:g.54290196C>T

Select item 148036967518.

rs1480369675 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:53788007 (GRCh38)
19:54291261 (GRCh37)
Canonical SPDI:: NC_000019.10:53788006:C:G
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.53788007C>G, NC_000019.9:g.54291261C>G, XR_007067336.1:n.219G>C

Select item 147629058319.

rs1476290583 has merged into rs376274287 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:53787225 (GRCh38)
19:54290479 (GRCh37)
Canonical SPDI:: NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:53787212:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), MIR371B (Varview), LOC124904767 (Varview)
Functional Consequence:: downstream_transcript_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
-=0.0667/257 (ALSPAC)
-=0.275/1377 (1000Genomes)
HGVS:: NC_000019.10:g.53787225_53787230del, NC_000019.10:g.53787226_53787230del, NC_000019.10:g.53787227_53787230del, NC_000019.10:g.53787228_53787230del, NC_000019.10:g.53787229_53787230del, NC_000019.10:g.53787230del, NC_000019.10:g.53787230dup, NC_000019.10:g.53787229_53787230dup, NC_000019.10:g.53787228_53787230dup, NC_000019.10:g.53787227_53787230dup, NC_000019.10:g.53787224_53787230dup, NC_000019.9:g.54290479_54290484del, NC_000019.9:g.54290480_54290484del, NC_000019.9:g.54290481_54290484del, NC_000019.9:g.54290482_54290484del, NC_000019.9:g.54290483_54290484del, NC_000019.9:g.54290484del, NC_000019.9:g.54290484dup, NC_000019.9:g.54290483_54290484dup, NC_000019.9:g.54290482_54290484dup, NC_000019.9:g.54290481_54290484dup, NC_000019.9:g.54290478_54290484dup, XR_007067336.1:n.881_886del, XR_007067336.1:n.882_886del, XR_007067336.1:n.883_886del, XR_007067336.1:n.884_886del, XR_007067336.1:n.885_886del, XR_007067336.1:n.886del, XR_007067336.1:n.886dup, XR_007067336.1:n.885_886dup, XR_007067336.1:n.884_886dup, XR_007067336.1:n.883_886dup, XR_007067336.1:n.880_886dup

Select item 147594674320.

rs1475946743 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 19:53787061 (GRCh38)
19:54290315 (GRCh37)
Canonical SPDI:: NC_000019.10:53787060:T:A,NC_000019.10:53787060:T:G
Gene:: MIR371A (Varview), MIR372 (Varview), MIR373 (Varview), LOC124904767 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.53787061T>A, NC_000019.10:g.53787061T>G, NC_000019.9:g.54290315T>A, NC_000019.9:g.54290315T>G, XR_007067336.1:n.1038A>T, XR_007067336.1:n.1038A>C

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