SNP Links for Gene (Select 442868) - SNP

Select item 14447491141.

rs1444749114 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:25043964 (GRCh38)
Y:27190111 (GRCh37)
Canonical SPDI:: NC_000024.10:25043963:G:A
Gene:: BPY2C (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
HGVS:: NC_000024.10:g.25043964G>A, NC_000024.9:g.27190111G>A, NG_004755.2:g.3233078G>A, NM_001002761.1:c.60C>T

Select item 12801923622.

rs1280192362 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: Y:25039658 (GRCh38)
Y:27185805 (GRCh37)
Canonical SPDI:: NC_000024.10:25039657:C:T
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000024.10:g.25039658C>T, NC_000024.9:g.27185805C>T, NG_004755.2:g.3228772C>T

Select item 12145898763.

rs1214589876 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: Y:25043938 (GRCh38)
Y:27190085 (GRCh37)
Canonical SPDI:: NC_000024.10:25043937:AA:
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: -=0.0001/1 (GnomAD_exomes)
HGVS:: NC_000024.10:g.25043938_25043939del, NC_000024.9:g.27190085_27190086del, NG_004755.2:g.3233052_3233053del

Select item 7800595834.

rs780059583 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: Y:25043903 (GRCh38)
Y:27190050 (GRCh37)
Canonical SPDI:: NC_000024.10:25043902:A:C
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00381/6 (ALFA)
A=0./0 (SGDP_PRJ)
C=0.00463/48 (GnomAD_exomes)
C=0.01342/137 (GnomAD)
C=0.02614/16 (ExAC)
HGVS:: NC_000024.10:g.25043903A>C, NC_000024.9:g.27190050A>C, NG_004755.2:g.3233017A>C

Select item 7698426795.

rs769842679 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: Y:25043902 (GRCh38)
Y:27190049 (GRCh37)
Canonical SPDI:: NC_000024.10:25043901:T:G
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: G=0./0 (ExAC)
HGVS:: NC_000024.10:g.25043902T>G, NC_000024.9:g.27190049T>G, NG_004755.2:g.3233016T>G

Select item 3684980866.

rs368498086 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: Y:25043838 (GRCh38)
Y:27189985 (GRCh37)
Canonical SPDI:: NC_000024.10:25043837:T:C
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000024.10:g.25043838T>C, NC_000024.9:g.27189985T>C, NG_004755.2:g.3232952T>C

Select item 563507337.

rs56350733 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: Y:25043819 (GRCh38)
Y:27189966 (GRCh37)
Canonical SPDI:: NC_000024.10:25043818:G:A
Gene:: BPY2C (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000024.10:g.25043819G>A, NC_000024.9:g.27189966G>A, NG_004755.2:g.3232933G>A

dbSNP