SNP Links for Gene (Select 441478) - SNP

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Select item 14907522771.

rs1490752277 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:137299820 (GRCh38)
9:140194272 (GRCh37)
Canonical SPDI:: NC_000009.12:137299819:A:G
Gene:: NRARP (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.137299820A>G, NC_000009.11:g.140194272A>G, NM_001004354.3:c.*1764T>C, NM_001004354.2:c.*1764T>C

Select item 14898375402.

rs1489837540 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:137302651 (GRCh38)
9:140197103 (GRCh37)
Canonical SPDI:: NC_000009.12:137302650:C:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.137302651C>T, NC_000009.11:g.140197103C>T

Select item 14896937893.

rs1489693789 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:137299487 (GRCh38)
9:140193939 (GRCh37)
Canonical SPDI:: NC_000009.12:137299486:C:T
Gene:: NRARP (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000035/1 (TOMMO)
T=0.000156/1 (1000Genomes)
T=0.000546/1 (Korea1K)
HGVS:: NC_000009.12:g.137299487C>T, NC_000009.11:g.140193939C>T

Select item 14888955364.

rs1488895536 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 9:137302444 (GRCh38)
9:140196896 (GRCh37)
Canonical SPDI:: NC_000009.12:137302443:G:A,NC_000009.12:137302443:G:C
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.137302444G>A, NC_000009.12:g.137302444G>C, NC_000009.11:g.140196896G>A, NC_000009.11:g.140196896G>C

Select item 14887848615.

rs1488784861 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 9:137303154 (GRCh38)
9:140197607 (GRCh37)
Canonical SPDI:: NC_000009.12:137303154:TTTTT:TTTTTT
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTTTTT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.137303159dup, NC_000009.11:g.140197611dup

Select item 14884661866.

rs1488466186 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:137302388 (GRCh38)
9:140196840 (GRCh37)
Canonical SPDI:: NC_000009.12:137302387:C:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.137302388C>T, NC_000009.11:g.140196840C>T

Select item 14884406057.

rs1488440605 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:137303041 (GRCh38)
9:140197493 (GRCh37)
Canonical SPDI:: NC_000009.12:137303040:G:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.137303041G>T, NC_000009.11:g.140197493G>T

Select item 14881901858.

rs1488190185 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:137302497 (GRCh38)
9:140196949 (GRCh37)
Canonical SPDI:: NC_000009.12:137302496:C:A,NC_000009.12:137302496:C:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000121/32 (TOPMED)
HGVS:: NC_000009.12:g.137302497C>A, NC_000009.12:g.137302497C>T, NC_000009.11:g.140196949C>A, NC_000009.11:g.140196949C>T

Select item 14879125189.

rs1487912518 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:137302264 (GRCh38)
9:140196716 (GRCh37)
Canonical SPDI:: NC_000009.12:137302263:G:A
Gene:: NRARP (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.137302264G>A, NC_000009.11:g.140196716G>A, NM_001004354.3:c.-336C>T

Select item 148777438910.

rs1487774389 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 9:137303184 (GRCh38)
9:140197636 (GRCh37)
Canonical SPDI:: NC_000009.12:137303183:G:C,NC_000009.12:137303183:G:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.137303184G>C, NC_000009.12:g.137303184G>T, NC_000009.11:g.140197636G>C, NC_000009.11:g.140197636G>T

Select item 148722883711.

rs1487228837 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:137301472 (GRCh38)
9:140195924 (GRCh37)
Canonical SPDI:: NC_000009.12:137301471:C:T
Gene:: NRARP (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000009.12:g.137301472C>T, NC_000009.11:g.140195924C>T, NM_001004354.3:c.*112G>A, NM_001004354.2:c.*112G>A

Select item 148682104212.

rs1486821042 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGGCCAGGTGGCCGCCGGGGGGG>- [Show Flanks]
Chromosome:: 9:137302484 (GRCh38)
9:140196936 (GRCh37)
Canonical SPDI:: NC_000009.12:137302479:GGGGGAGGCCAGGTGGCCGCCGGGGGGG:GGGG
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0.000071/1 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.137302484_137302507del, NC_000009.11:g.140196936_140196959del

Select item 148679644413.

rs1486796444 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:137304077 (GRCh38)
9:140198529 (GRCh37)
Canonical SPDI:: NC_000009.12:137304076:T:C
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000447/2 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000446/2 (Estonian)
HGVS:: NC_000009.12:g.137304077T>C, NC_000009.11:g.140198529T>C

Select item 148662616314.

rs1486626163 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:137303893 (GRCh38)
9:140198345 (GRCh37)
Canonical SPDI:: NC_000009.12:137303892:C:G,NC_000009.12:137303892:C:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000009.12:g.137303893C>G, NC_000009.12:g.137303893C>T, NC_000009.11:g.140198345C>G, NC_000009.11:g.140198345C>T

Select item 148641955515.

rs1486419555 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:137301715 (GRCh38)
9:140196167 (GRCh37)
Canonical SPDI:: NC_000009.12:137301714:T:C
Gene:: NRARP (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000009.12:g.137301715T>C, NC_000009.11:g.140196167T>C, NM_001004354.3:c.214A>G, NM_001004354.2:c.214A>G, NP_001004354.1:p.Lys72Glu

Select item 148471915216.

rs1484719152 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:137300438 (GRCh38)
9:140194890 (GRCh37)
Canonical SPDI:: NC_000009.12:137300437:T:A
Gene:: NRARP (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.137300438T>A, NC_000009.11:g.140194890T>A, NM_001004354.3:c.*1146A>T, NM_001004354.2:c.*1146A>T

Select item 148373040217.

rs1483730402 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:137302850 (GRCh38)
9:140197302 (GRCh37)
Canonical SPDI:: NC_000009.12:137302849:C:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.137302850C>T, NC_000009.11:g.140197302C>T

Select item 148345205618.

rs1483452056 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:137301333 (GRCh38)
9:140195785 (GRCh37)
Canonical SPDI:: NC_000009.12:137301332:A:G
Gene:: NRARP (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.137301333A>G, NC_000009.11:g.140195785A>G, NM_001004354.3:c.*251T>C, NM_001004354.2:c.*251T>C

Select item 148330627119.

rs1483306271 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:137299858 (GRCh38)
9:140194310 (GRCh37)
Canonical SPDI:: NC_000009.12:137299857:G:A
Gene:: NRARP (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.137299858G>A, NC_000009.11:g.140194310G>A, NM_001004354.3:c.*1726C>T, NM_001004354.2:c.*1726C>T

Select item 148177039520.

rs1481770395 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 9:137302326 (GRCh38)
9:140196778 (GRCh37)
Canonical SPDI:: NC_000009.12:137302325:G:A,NC_000009.12:137302325:G:T
Gene:: NRARP (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.00463/1 (Vietnamese)
HGVS:: NC_000009.12:g.137302326G>A, NC_000009.12:g.137302326G>T, NC_000009.11:g.140196778G>A, NC_000009.11:g.140196778G>T

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