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Items: 1 to 20 of 4395

1.

rs1491563718 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    AG>- [Show Flanks]
    Chromosome:
    3:9395876 (GRCh38)
    3:9437560 (GRCh37)
    Canonical SPDI:
    NC_000003.12:9395870:GAGAGAG:GAGAG
    Gene:
    SETD5 (Varview), THUMPD3-AS1 (Varview)
    Functional Consequence:
    intron_variant,upstream_transcript_variant,2KB_upstream_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    GAGAG=0./0 (ALFA)
    -=0.000004/1 (TOPMED)
    -=0.000007/1 (GnomAD)
    HGVS:
    2.

    rs1491433933 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      ->A [Show Flanks]
      Chromosome:
      3:9395871 (GRCh38)
      3:9437556 (GRCh37)
      Canonical SPDI:
      NC_000003.12:9395871:A:AA
      Gene:
      SETD5 (Varview), THUMPD3-AS1 (Varview)
      Functional Consequence:
      intron_variant,upstream_transcript_variant,2KB_upstream_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      AA=0./0 (ALFA)
      A=0.000004/1 (TOPMED)
      HGVS:
      3.

      rs1491349643 has merged into rs5846631 [Homo sapiens]
        Variant type:
        DELINS
        Alleles:
        AAAAA>-,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAAAAA [Show Flanks]
        Chromosome:
        3:9393891 (GRCh38)
        3:9435575 (GRCh37)
        Canonical SPDI:
        NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:9393881:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA
        Gene:
        THUMPD3-AS1 (Varview)
        Functional Consequence:
        intron_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        AAAAAAAAAAA=0./0 (ALFA)
        A=0.0394/152 (ALSPAC)
        A=0.0418/155 (TWINSUK)
        HGVS:
        4.

        rs1491263204 has merged into rs763730354 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          TTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT [Show Flanks]
          Chromosome:
          3:9391282 (GRCh38)
          3:9432966 (GRCh37)
          Canonical SPDI:
          NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:9391272:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT
          Gene:
          THUMPD3-AS1 (Varview)
          Functional Consequence:
          intron_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          TTTTTTTTTTT=0./0 (ALFA)
          -=0.225/9 (GENOME_DK)
          HGVS:
          5.

          rs1490918855 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G [Show Flanks]
            Chromosome:
            3:9388091 (GRCh38)
            3:9429775 (GRCh37)
            Canonical SPDI:
            NC_000003.12:9388090:A:G
            Gene:
            THUMPD3-AS1 (Varview)
            Functional Consequence:
            non_coding_transcript_variant,genic_downstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0./0 (ALFA)
            G=0.000019/5 (TOPMED)
            G=0.000029/4 (GnomAD)
            HGVS:
            6.

            rs1490862049 [Homo sapiens]
              Variant type:
              DEL
              Alleles:
              A>- [Show Flanks]
              Chromosome:
              3:9389006 (GRCh38)
              3:9430690 (GRCh37)
              Canonical SPDI:
              NC_000003.12:9389005:A:
              Gene:
              THUMPD3-AS1 (Varview)
              Functional Consequence:
              non_coding_transcript_variant,intron_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              -=0./0 (ALFA)
              -=0.000007/1 (GnomAD)
              -=0.000011/3 (TOPMED)
              HGVS:
              7.

              rs1490809155 [Homo sapiens]
                Variant type:
                DEL
                Alleles:
                A>- [Show Flanks]
                Chromosome:
                3:9398641 (GRCh38)
                3:9440325 (GRCh37)
                Canonical SPDI:
                NC_000003.12:9398640:A:
                Gene:
                SETD5 (Varview), THUMPD3-AS1 (Varview)
                Functional Consequence:
                intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
                Validated:
                by frequency,by alfa
                MAF:
                -=0./0 (ALFA)
                -=0.000008/2 (TOPMED)
                HGVS:
                8.

                rs1490770088 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A,T [Show Flanks]
                  Chromosome:
                  3:9399425 (GRCh38)
                  3:9441109 (GRCh37)
                  Canonical SPDI:
                  NC_000003.12:9399424:G:A,NC_000003.12:9399424:G:T
                  Gene:
                  SETD5 (Varview), THUMPD3-AS1 (Varview)
                  Functional Consequence:
                  intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  T=0./0 (ALFA)
                  A=0.000007/1 (GnomAD)
                  HGVS:
                  9.

                  rs1490699350 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>A,T [Show Flanks]
                    Chromosome:
                    3:9394248 (GRCh38)
                    3:9435932 (GRCh37)
                    Canonical SPDI:
                    NC_000003.12:9394247:C:A,NC_000003.12:9394247:C:T
                    Gene:
                    THUMPD3-AS1 (Varview)
                    Functional Consequence:
                    intron_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    T=0./0 (ALFA)
                    A=0.000007/1 (GnomAD)
                    HGVS:
                    10.

                    rs1490590413 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      3:9393248 (GRCh38)
                      3:9434932 (GRCh37)
                      Canonical SPDI:
                      NC_000003.12:9393247:G:A
                      Gene:
                      THUMPD3-AS1 (Varview)
                      Functional Consequence:
                      intron_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      A=0.000054/1 (ALFA)
                      A=0.000011/3 (TOPMED)
                      A=0.000014/2 (GnomAD)
                      A=0.000223/1 (Estonian)
                      HGVS:
                      11.

                      rs1490534725 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        A>C,G,T [Show Flanks]
                        Chromosome:
                        3:9395152 (GRCh38)
                        3:9436836 (GRCh37)
                        Canonical SPDI:
                        NC_000003.12:9395151:A:C,NC_000003.12:9395151:A:G,NC_000003.12:9395151:A:T
                        Gene:
                        THUMPD3-AS1 (Varview)
                        Functional Consequence:
                        intron_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        G=0./0 (ALFA)
                        C=0.000011/3 (TOPMED)
                        T=0.000035/1 (TOMMO)
                        HGVS:
                        12.

                        rs1490370572 [Homo sapiens]
                          Variant type:
                          DELINS
                          Alleles:
                          A>- [Show Flanks]
                          Chromosome:
                          3:9389352 (GRCh38)
                          3:9431036 (GRCh37)
                          Canonical SPDI:
                          NC_000003.12:9389351:AAAA:AAA
                          Gene:
                          THUMPD3-AS1 (Varview)
                          Functional Consequence:
                          non_coding_transcript_variant,intron_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          AAA=0./0 (ALFA)
                          -=0.000007/1 (GnomAD)
                          -=0.000008/2 (TOPMED)
                          HGVS:
                          13.

                          rs1490046896 [Homo sapiens]
                            Variant type:
                            DELINS
                            Alleles:
                            CT>- [Show Flanks]
                            Chromosome:
                            3:9388594 (GRCh38)
                            3:9430278 (GRCh37)
                            Canonical SPDI:
                            NC_000003.12:9388591:CTCT:CT
                            Gene:
                            THUMPD3-AS1 (Varview)
                            Functional Consequence:
                            genic_downstream_transcript_variant,intron_variant,downstream_transcript_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            CTCT=0./0 (ALFA)
                            -=0.000007/1 (GnomAD)
                            -=0.000008/2 (TOPMED)
                            HGVS:
                            15.

                            rs1489582456 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>A,T [Show Flanks]
                              Chromosome:
                              3:9397657 (GRCh38)
                              3:9439341 (GRCh37)
                              Canonical SPDI:
                              NC_000003.12:9397656:C:A,NC_000003.12:9397656:C:T
                              Gene:
                              SETD5 (Varview), THUMPD3-AS1 (Varview)
                              Functional Consequence:
                              2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
                              Validated:
                              by frequency,by alfa
                              MAF:
                              T=0./0 (ALFA)
                              HGVS:
                              NC_000003.12:g.9397657C>A, NC_000003.12:g.9397657C>T, NC_000003.11:g.9439341C>A, NC_000003.11:g.9439341C>T, NG_034132.1:g.4958C>A, NG_034132.1:g.4958C>T, NM_001080517.3:c.-497C>A, NM_001080517.3:c.-497C>T, NM_001349451.2:c.-1096C>A, NM_001349451.2:c.-1096C>T, NM_001292043.2:c.-1055C>A, NM_001292043.2:c.-1055C>T, XM_011533922.2:c.-497C>A, XM_011533922.2:c.-497C>T, XM_017006771.2:c.-497C>A, XM_017006771.2:c.-497C>T, XM_011533928.2:c.-497C>A, XM_011533928.2:c.-497C>T, XM_017006774.2:c.-497C>A, XM_017006774.2:c.-497C>T, XM_005265301.2:c.-497C>A, XM_005265301.2:c.-497C>T, XM_047448468.1:c.-5969C>A, XM_047448468.1:c.-5969C>T, XM_047448466.1:c.-5029C>A, XM_047448466.1:c.-5029C>T, XM_047448478.1:c.-5029C>A, XM_047448478.1:c.-5029C>T, XM_047448477.1:c.-5029C>A, XM_047448477.1:c.-5029C>T, XM_047448485.1:c.-5029C>A, XM_047448485.1:c.-5029C>T, XM_047448483.1:c.-5029C>A, XM_047448483.1:c.-5029C>T, XM_047448486.1:c.-5029C>A, XM_047448486.1:c.-5029C>T, XM_047448495.1:c.-5029C>A, XM_047448495.1:c.-5029C>T, XM_047448500.1:c.-5029C>A, XM_047448500.1:c.-5029C>T, XM_047448501.1:c.-5029C>A, XM_047448501.1:c.-5029C>T, XM_047448503.1:c.-5029C>A, XM_047448503.1:c.-5029C>T, XM_047448476.1:c.-1711C>A, XM_047448476.1:c.-1711C>T, XM_047448506.1:c.-5029C>A, XM_047448506.1:c.-5029C>T, XM_047448507.1:c.-5029C>A, XM_047448507.1:c.-5029C>T, XM_047448508.1:c.-5029C>A, XM_047448508.1:c.-5029C>T, XM_047448473.1:c.-1032C>A, XM_047448473.1:c.-1032C>T, XM_047448482.1:c.-1032C>A, XM_047448482.1:c.-1032C>T, XM_047448489.1:c.-1032C>A, XM_047448489.1:c.-1032C>T, XM_047448487.1:c.-1032C>A, XM_047448487.1:c.-1032C>T, XM_047448496.1:c.-1032C>A, XM_047448496.1:c.-1032C>T, XM_047448474.1:c.-510C>A, XM_047448474.1:c.-510C>T, XM_047448479.1:c.-510C>A, XM_047448479.1:c.-510C>T, XM_047448481.1:c.-510C>A, XM_047448481.1:c.-510C>T, XM_047448480.1:c.-497C>A, XM_047448480.1:c.-497C>T, XM_047448490.1:c.-510C>A, XM_047448490.1:c.-510C>T, XM_047448488.1:c.-510C>A, XM_047448488.1:c.-510C>T, XM_047448492.1:c.-497C>A, XM_047448492.1:c.-497C>T, XM_047448497.1:c.-510C>A, XM_047448497.1:c.-510C>T, XM_047448502.1:c.-497C>A, XM_047448502.1:c.-497C>T, XM_047448504.1:c.-497C>A, XM_047448504.1:c.-497C>T, XM_047448505.1:c.-497C>A, XM_047448505.1:c.-497C>T
                              16.

                              rs1489415171 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                T>G [Show Flanks]
                                Chromosome:
                                3:9397307 (GRCh38)
                                3:9438991 (GRCh37)
                                Canonical SPDI:
                                NC_000003.12:9397306:T:G
                                Gene:
                                SETD5 (Varview), THUMPD3-AS1 (Varview)
                                Functional Consequence:
                                intron_variant,upstream_transcript_variant,2KB_upstream_variant,genic_upstream_transcript_variant
                                Validated:
                                by frequency,by alfa,by cluster
                                MAF:
                                G=0./0 (ALFA)
                                G=0.000004/1 (TOPMED)
                                G=0.000007/1 (GnomAD)
                                HGVS:
                                17.

                                rs1489287479 [Homo sapiens]
                                  Variant type:
                                  SNV
                                  Alleles:
                                  A>C [Show Flanks]
                                  Chromosome:
                                  3:9396525 (GRCh38)
                                  3:9438209 (GRCh37)
                                  Canonical SPDI:
                                  NC_000003.12:9396524:A:C
                                  Gene:
                                  SETD5 (Varview), THUMPD3-AS1 (Varview)
                                  Functional Consequence:
                                  intron_variant,upstream_transcript_variant,2KB_upstream_variant
                                  Validated:
                                  by frequency,by alfa
                                  MAF:
                                  C=0./0 (ALFA)
                                  C=0./0 (GnomAD)
                                  HGVS:
                                  19.

                                  rs1488750398 [Homo sapiens]
                                    Variant type:
                                    DELINS
                                    Alleles:
                                    ->T [Show Flanks]
                                    Chromosome:
                                    3:9396539 (GRCh38)
                                    3:9438224 (GRCh37)
                                    Canonical SPDI:
                                    NC_000003.12:9396539:T:TT
                                    Gene:
                                    SETD5 (Varview), THUMPD3-AS1 (Varview)
                                    Functional Consequence:
                                    intron_variant,upstream_transcript_variant,2KB_upstream_variant
                                    Validated:
                                    by frequency,by alfa,by cluster
                                    MAF:
                                    TT=0./0 (ALFA)
                                    T=0.000004/1 (TOPMED)
                                    T=0.000007/1 (GnomAD)
                                    HGVS:
                                    20.

                                    rs1488586731 [Homo sapiens]
                                      Variant type:
                                      SNV
                                      Alleles:
                                      G>A,C [Show Flanks]
                                      Chromosome:
                                      3:9387651 (GRCh38)
                                      3:9429335 (GRCh37)
                                      Canonical SPDI:
                                      NC_000003.12:9387650:G:A,NC_000003.12:9387650:G:C
                                      Gene:
                                      THUMPD3-AS1 (Varview)
                                      Functional Consequence:
                                      intron_variant,genic_downstream_transcript_variant
                                      Validated:
                                      by frequency,by alfa,by cluster
                                      MAF:
                                      C=0./0 (ALFA)
                                      C=0.000007/1 (GnomAD)
                                      HGVS:

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