SNP Links for Gene (Select 440672) - SNP

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Select item 14915890521.

rs1491589052 has merged into rs1158870262 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT [Show Flanks]
Chromosome:: 1:148752058 (GRCh38)
1:14 (GRCh37)
Canonical SPDI:: NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000001.11:148752042:TTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000001.11:g.148752058_148752060del, NC_000001.11:g.148752059_148752060del, NC_000001.11:g.148752060del, NC_000001.11:g.148752060dup, NC_000001.11:g.148752059_148752060dup, NC_000001.11:g.148752058_148752060dup, NC_000001.11:g.148752057_148752060dup, NW_003871055.3:g.5567471_5567473del, NW_003871055.3:g.5567472_5567473del, NW_003871055.3:g.5567473del, NW_003871055.3:g.5567473dup, NW_003871055.3:g.5567472_5567473dup, NW_003871055.3:g.5567471_5567473dup, NW_003871055.3:g.5567470_5567473dup, NR_002212.4:n.3459_3461del, NR_002212.4:n.3460_3461del, NR_002212.4:n.3461del, NR_002212.4:n.3461dup, NR_002212.4:n.3460_3461dup, NR_002212.4:n.3459_3461dup, NR_002212.4:n.3458_3461dup, NM_001355407.2:c.*2560_*2562del, NM_001355407.2:c.*2561_*2562del, NM_001355407.2:c.*2562del, NM_001355407.2:c.*2562dup, NM_001355407.2:c.*2561_*2562dup, NM_001355407.2:c.*2560_*2562dup, NM_001355407.2:c.*2559_*2562dup, NM_001355407.1:c.*2560_*2562del, NM_001355407.1:c.*2561_*2562del, NM_001355407.1:c.*2562del, NM_001355407.1:c.*2562dup, NM_001355407.1:c.*2561_*2562dup, NM_001355407.1:c.*2560_*2562dup, NM_001355407.1:c.*2559_*2562dup

Select item 14911177772.

rs1491117777 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 1:148752043 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752043::C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00145/4 (GnomAD)
HGVS:: NC_000001.11:g.148752043_148752044insC, NW_003871055.3:g.5567456_5567457insC, NR_002212.4:n.3444_3445insC, NM_001355407.2:c.*2545_*2546insC, NM_001355407.1:c.*2545_*2546insC

Select item 14893310893.

rs1489331089 has merged into rs146923898 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA [Show Flanks]
Chromosome:: 1:148752406 (GRCh38)
1:9 (GRCh37)
Canonical SPDI:: NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000001.11:148752395:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.148752406_148752412del, NC_000001.11:g.148752409_148752412del, NC_000001.11:g.148752410_148752412del, NC_000001.11:g.148752411_148752412del, NC_000001.11:g.148752412del, NC_000001.11:g.148752412dup, NC_000001.11:g.148752411_148752412dup, NC_000001.11:g.148752410_148752412dup, NC_000001.11:g.148752409_148752412dup, NC_000001.11:g.148752408_148752412dup, NW_003871055.3:g.5567819_5567825del, NW_003871055.3:g.5567822_5567825del, NW_003871055.3:g.5567823_5567825del, NW_003871055.3:g.5567824_5567825del, NW_003871055.3:g.5567825del, NW_003871055.3:g.5567825dup, NW_003871055.3:g.5567824_5567825dup, NW_003871055.3:g.5567823_5567825dup, NW_003871055.3:g.5567822_5567825dup, NW_003871055.3:g.5567821_5567825dup, NM_001355407.2:c.*2908_*2914del, NM_001355407.2:c.*2911_*2914del, NM_001355407.2:c.*2912_*2914del, NM_001355407.2:c.*2913_*2914del, NM_001355407.2:c.*2914del, NM_001355407.2:c.*2914dup, NM_001355407.2:c.*2913_*2914dup, NM_001355407.2:c.*2912_*2914dup, NM_001355407.2:c.*2911_*2914dup, NM_001355407.2:c.*2910_*2914dup, NM_001355407.1:c.*2908_*2914del, NM_001355407.1:c.*2911_*2914del, NM_001355407.1:c.*2912_*2914del, NM_001355407.1:c.*2913_*2914del, NM_001355407.1:c.*2914del, NM_001355407.1:c.*2914dup, NM_001355407.1:c.*2913_*2914dup, NM_001355407.1:c.*2912_*2914dup, NM_001355407.1:c.*2911_*2914dup, NM_001355407.1:c.*2910_*2914dup

Select item 14838081974.

rs1483808197 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:148751802 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751801:A:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751802A>C, NW_003871055.3:g.5567215A>C, NR_002212.4:n.3203A>C, NM_001355407.2:c.*2304A>C, NM_001355407.1:c.*2304A>C

Select item 14833939445.

rs1483393944 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:148751964 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751963:A:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751964A>C, NW_003871055.3:g.5567377A>C, NR_002212.4:n.3365A>C, NM_001355407.2:c.*2466A>C, NM_001355407.1:c.*2466A>C

Select item 14797654836.

rs1479765483 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:148751790 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751789:G:A
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751790G>A, NW_003871055.3:g.5567203G>A, NR_002212.4:n.3191G>A, NM_001355407.2:c.*2292G>A, NM_001355407.1:c.*2292G>A

Select item 14741477697.

rs1474147769 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 1:148752440 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752439:AAAA:AAA
Gene:: NUDT4B (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.148752443del, NW_003871055.3:g.5567856del

Select item 14737826378.

rs1473782637 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:148751942 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751941:G:T
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0.00076/9 (ALFA)
HGVS:: NC_000001.11:g.148751942G>T, NW_003871055.3:g.5567355G>T, NR_002212.4:n.3343G>T, NM_001355407.2:c.*2444G>T, NM_001355407.1:c.*2444G>T

Select item 14686534169.

rs1468653416 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:148751913 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751912:T:A
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751913T>A, NW_003871055.3:g.5567326T>A, NR_002212.4:n.3314T>A, NM_001355407.2:c.*2415T>A, NM_001355407.1:c.*2415T>A

Select item 146173338810.

rs1461733388 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:148751894 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751893:A:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751894A>C, NW_003871055.3:g.5567307A>C, NR_002212.4:n.3295A>C, NM_001355407.2:c.*2396A>C, NM_001355407.1:c.*2396A>C

Select item 146047586811.

rs1460475868 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:148752044 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752043:T:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0.01745/207 (ALFA)
C=0.10381/441 (GnomAD)
HGVS:: NC_000001.11:g.148752044T>C, NW_003871055.3:g.5567457T>C, NR_002212.4:n.3445T>C, NM_001355407.2:c.*2546T>C, NM_001355407.1:c.*2546T>C

Select item 145875001212.

rs1458750012 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:148752372 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752371:C:A
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0.0612/726 (ALFA)
A=0.00112/23 (TOMMO)
HGVS:: NC_000001.11:g.148752372C>A, NW_003871055.3:g.5567785C>A, NR_002212.4:n.3773C>A, NM_001355407.2:c.*2874C>A, NM_001355407.1:c.*2874C>A

Select item 144517112413.

rs1445171124 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 1:148752394 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752393:T:A,NC_000001.11:148752393:T:G
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
A=0.00238/37 (TOMMO)
HGVS:: NC_000001.11:g.148752394T>A, NC_000001.11:g.148752394T>G, NW_003871055.3:g.5567807T>A, NW_003871055.3:g.5567807T>G, NR_002212.4:n.3795T>A, NR_002212.4:n.3795T>G, NM_001355407.2:c.*2896T>A, NM_001355407.2:c.*2896T>G, NM_001355407.1:c.*2896T>A, NM_001355407.1:c.*2896T>G

Select item 144367343814.

rs1443673438 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:148752379 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752378:T:A
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.18235/2163 (ALFA)
A=0.00117/23 (TOMMO)
A=0.02162/8 (Korea1K)
HGVS:: NC_000001.11:g.148752379T>A, NW_003871055.3:g.5567792T>A, NR_002212.4:n.3780T>A, NM_001355407.2:c.*2881T>A, NM_001355407.1:c.*2881T>A

Select item 143786929815.

rs1437869298 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:148752329 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752328:G:A,NC_000001.11:148752328:G:T
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
T=0.0003/7 (TOMMO)
HGVS:: NC_000001.11:g.148752329G>A, NC_000001.11:g.148752329G>T, NW_003871055.3:g.5567742G>A, NW_003871055.3:g.5567742G>T, NR_002212.4:n.3730G>A, NR_002212.4:n.3730G>T, NM_001355407.2:c.*2831G>A, NM_001355407.2:c.*2831G>T, NM_001355407.1:c.*2831G>A, NM_001355407.1:c.*2831G>T

Select item 143428542616.

rs1434285426 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:148751676 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751675:A:G
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0.00017/2 (ALFA)
G=0.00023/4 (GnomAD)
HGVS:: NC_000001.11:g.148751676A>G, NW_003871055.3:g.5567089A>G, NR_002212.4:n.3077A>G, NM_001355407.2:c.*2178A>G, NM_001355407.1:c.*2178A>G

Select item 143059436817.

rs1430594368 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:148751716 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751715:T:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.148751716T>C, NW_003871055.3:g.5567129T>C, NR_002212.4:n.3117T>C, NM_001355407.2:c.*2218T>C, NM_001355407.1:c.*2218T>C

Select item 142923821518.

rs1429238215 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 1:148751917 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751916:AAAA:AAA
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.148751920del, NW_003871055.3:g.5567333del, NR_002212.4:n.3321del, NM_001355407.2:c.*2422del, NM_001355407.1:c.*2422del

Select item 142814770919.

rs1428147709 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:148752592 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148752592:AA:AAA
Gene:: NUDT4B (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAA=0.18454/2189 (ALFA)
A=0.17045/1142 (TOMMO)
HGVS:: NC_000001.11:g.148752594dup, NW_003871055.3:g.5568007dup

Select item 142801046820.

rs1428010468 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:148751756 (GRCh38)
1:-1 (GRCh37)
Canonical SPDI:: NC_000001.11:148751755:T:C
Gene:: NUDT4B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.00002/1 (GnomAD)
HGVS:: NC_000001.11:g.148751756T>C, NW_003871055.3:g.5567169T>C, NR_002212.4:n.3157T>C, NM_001355407.2:c.*2258T>C, NM_001355407.1:c.*2258T>C

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