SNP Links for Gene (Select 4143) - SNP

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Links from Gene

Items: 1 to 20 of 1000

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Select item 14908898801.

rs1490889880 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 10:80277818 (GRCh38)
10:82037574 (GRCh37)
Canonical SPDI:: NC_000010.11:80277817:T:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000010.11:g.80277818T>A, NC_000010.10:g.82037574T>A, NG_008083.1:g.16861A>T

Select item 14903684742.

rs1490368474 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:80277316 (GRCh38)
10:82037072 (GRCh37)
Canonical SPDI:: NC_000010.11:80277315:C:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.80277316C>T, NC_000010.10:g.82037072C>T, NG_008083.1:g.17363G>A

Select item 14900517523.

rs1490051752 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:80291928 (GRCh38)
10:82051684 (GRCh37)
Canonical SPDI:: NC_000010.11:80291927:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80291928T>C, NC_000010.10:g.82051684T>C, NG_008083.1:g.2751A>G

Select item 14897906544.

rs1489790654 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:80275768 (GRCh38)
10:82035524 (GRCh37)
Canonical SPDI:: NC_000010.11:80275767:A:G
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.80275768A>G, NC_000010.10:g.82035524A>G, NG_008083.1:g.18911T>C

Select item 14897781865.

rs1489778186 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:80283586 (GRCh38)
10:82043342 (GRCh37)
Canonical SPDI:: NC_000010.11:80283585:G:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80283586G>T, NC_000010.10:g.82043342G>T, NG_008083.1:g.11093C>A

Select item 14897545226.

rs1489754522 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:80272592 (GRCh38)
10:82032348 (GRCh37)
Canonical SPDI:: NC_000010.11:80272591:A:G
Gene:: MAT1A (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.80272592A>G, NC_000010.10:g.82032348A>G, NG_008083.1:g.22087T>C, NM_000429.3:c.*1189T>C, NM_000429.2:c.*1189T>C

Select item 14894732087.

rs1489473208 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:80291270 (GRCh38)
10:82051026 (GRCh37)
Canonical SPDI:: NC_000010.11:80291269:T:G
Gene:: MAT1A (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80291270T>G, NC_000010.10:g.82051026T>G, NG_008083.1:g.3409A>C

Select item 14892438238.

rs1489243823 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:80285183 (GRCh38)
10:82044939 (GRCh37)
Canonical SPDI:: NC_000010.11:80285182:C:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.80285183C>T, NC_000010.10:g.82044939C>T, NG_008083.1:g.9496G>A

Select item 14892209009.

rs1489220900 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:80283591 (GRCh38)
10:82043347 (GRCh37)
Canonical SPDI:: NC_000010.11:80283590:G:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.80283591G>A, NC_000010.10:g.82043347G>A, NG_008083.1:g.11088C>T

Select item 148911881510.

rs1489118815 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:80282629 (GRCh38)
10:82042385 (GRCh37)
Canonical SPDI:: NC_000010.11:80282628:C:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80282629C>T, NC_000010.10:g.82042385C>T, NG_008083.1:g.12050G>A

Select item 148894915611.

rs1488949156 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:80282324 (GRCh38)
10:82042080 (GRCh37)
Canonical SPDI:: NC_000010.11:80282323:G:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80282324G>A, NC_000010.10:g.82042080G>A, NG_008083.1:g.12355C>T

Select item 148893564412.

rs1488935644 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:80274762 (GRCh38)
10:82034518 (GRCh37)
Canonical SPDI:: NC_000010.11:80274761:C:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80274762C>T, NC_000010.10:g.82034518C>T, NG_008083.1:g.19917G>A

Select item 148887281613.

rs1488872816 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:80287402 (GRCh38)
10:82047158 (GRCh37)
Canonical SPDI:: NC_000010.11:80287401:G:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80287402G>A, NC_000010.10:g.82047158G>A, NG_008083.1:g.7277C>T

Select item 148866997414.

rs1488669974 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:80275170 (GRCh38)
10:82034926 (GRCh37)
Canonical SPDI:: NC_000010.11:80275169:A:G
Gene:: MAT1A (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80275170A>G, NC_000010.10:g.82034926A>G, NG_008083.1:g.19509T>C, NM_000429.3:c.798T>C, NM_000429.2:c.798T>C

Select item 148846429715.

rs1488464297 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 10:80285157 (GRCh38)
10:82044913 (GRCh37)
Canonical SPDI:: NC_000010.11:80285156:A:C,NC_000010.11:80285156:A:G
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.80285157A>C, NC_000010.11:g.80285157A>G, NC_000010.10:g.82044913A>C, NC_000010.10:g.82044913A>G, NG_008083.1:g.9522T>G, NG_008083.1:g.9522T>C

Select item 148841518116.

rs1488415181 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:80277416 (GRCh38)
10:82037172 (GRCh37)
Canonical SPDI:: NC_000010.11:80277415:G:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80277416G>A, NC_000010.10:g.82037172G>A, NG_008083.1:g.17263C>T

Select item 148825541517.

rs1488255415 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 10:80286369 (GRCh38)
10:82046125 (GRCh37)
Canonical SPDI:: NC_000010.11:80286368:T:A
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000010.11:g.80286369T>A, NC_000010.10:g.82046125T>A, NG_008083.1:g.8310A>T

Select item 148825068018.

rs1488250680 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:80289477 (GRCh38)
10:82049233 (GRCh37)
Canonical SPDI:: NC_000010.11:80289476:A:T
Gene:: MAT1A (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.80289477A>T, NC_000010.10:g.82049233A>T, NG_008083.1:g.5202T>A, NM_000429.3:c.-54T>A, NM_000429.2:c.-54T>A, NG_056368.1:g.85A>T

Select item 148805048719.

rs1488050487 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:80274222 (GRCh38)
10:82033978 (GRCh37)
Canonical SPDI:: NC_000010.11:80274221:C:T
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.80274222C>T, NC_000010.10:g.82033978C>T, NG_008083.1:g.20457G>A

Select item 148792623320.

rs1487926233 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:80277437 (GRCh38)
10:82037193 (GRCh37)
Canonical SPDI:: NC_000010.11:80277436:A:G
Gene:: MAT1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.80277437A>G, NC_000010.10:g.82037193A>G, NG_008083.1:g.17242T>C

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